RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 JCADQ9P266 1359 aa9.24□□□□□ -0.93
LRCH3-215ENST00000476664 CTTNBP2Q8WZ74 1663 aa9.23□□□□□ -0.93
LRCH3-215ENST00000476664 PPP1R12BO60237 982 aaPredicted RBP9.23□□□□□ -0.93
LRCH3-215ENST00000476664 S100BP04271 92 aaPredicted RBP9.23□□□□□ -0.93
LRCH3-215ENST00000476664 PLEKHG4Q58EX7 1191 aa9.23□□□□□ -0.93
LRCH3-215ENST00000476664 LRCH3Q96II8 777 aa9.23□□□□□ -0.93
LRCH3-215ENST00000476664 SEC16BQ96JE7 1060 aa9.23□□□□□ -0.93
LRCH3-215ENST00000476664 TSPAN10Q9H1Z9 355 aaPredicted RBP9.23□□□□□ -0.93
LRCH3-215ENST00000476664 KDM5CP41229 1560 aa9.23□□□□□ -0.93
LRCH3-215ENST00000476664 CLTCQ00610 1675 aaKnown RBP9.23□□□□□ -0.93
LRCH3-215ENST00000476664 PHLPP1O60346 1717 aa9.22□□□□□ -0.93
LRCH3-215ENST00000476664 GIPC1O14908 333 aa9.22□□□□□ -0.93
LRCH3-215ENST00000476664 U2SURPO15042 1029 aaKnown RBP9.22□□□□□ -0.93
LRCH3-215ENST00000476664 PSEN2P49810 448 aa9.22□□□□□ -0.93
LRCH3-215ENST00000476664 EVX2Q03828 476 aa9.22□□□□□ -0.93
LRCH3-215ENST00000476664 CCAR1Q8IX12 1150 aaKnown RBP9.22□□□□□ -0.93
LRCH3-215ENST00000476664 RASGRP4Q8TDF6 673 aa9.22□□□□□ -0.93
LRCH3-215ENST00000476664 CCDC136Q96JN2 1154 aa9.22□□□□□ -0.93
LRCH3-215ENST00000476664 ZFRQ96KR1 1074 aaKnown RBP9.22□□□□□ -0.93
LRCH3-215ENST00000476664 SRPK1Q96SB4 655 aaKnown RBP9.22□□□□□ -0.93
LRCH3-215ENST00000476664 DNAJC25Q9H1X3 360 aa9.22□□□□□ -0.93
LRCH3-215ENST00000476664 PCDHB3Q9Y5E6 796 aa9.22□□□□□ -0.93
LRCH3-215ENST00000476664 USP31Q70CQ4 1352 aa9.22□□□□□ -0.93
LRCH3-215ENST00000476664 NPHP4O75161 1426 aaPredicted RBP9.22□□□□□ -0.93
LRCH3-215ENST00000476664 ZNF518AQ6AHZ1 1483 aa9.21□□□□□ -0.93
LRCH3-215ENST00000476664 MAP4K4O95819 1239 aaPredicted RBP9.21□□□□□ -0.94
LRCH3-215ENST00000476664 PCSK2P16519 638 aa9.21□□□□□ -0.94
LRCH3-215ENST00000476664 GDF10P55107 478 aa9.21□□□□□ -0.94
LRCH3-215ENST00000476664 NFX1Q12986 1120 aaKnown RBP9.21□□□□□ -0.94
LRCH3-215ENST00000476664 ANKLE2Q86XL3 938 aa9.21□□□□□ -0.94
LRCH3-215ENST00000476664 AFAP1Q8N556 730 aa9.21□□□□□ -0.94
LRCH3-215ENST00000476664 MYO19Q96H55 970 aa9.21□□□□□ -0.94
LRCH3-215ENST00000476664 NEUROD4Q9HD90 331 aa9.21□□□□□ -0.94
LRCH3-215ENST00000476664 DDX56Q9NY93 547 aaKnown RBP9.21□□□□□ -0.94
LRCH3-215ENST00000476664 IQGAP1P46940 1657 aa9.2□□□□□ -0.94
LRCH3-215ENST00000476664 PEX14O75381 377 aa9.2□□□□□ -0.94
LRCH3-215ENST00000476664 EPHA4P54764 986 aa9.2□□□□□ -0.94
LRCH3-215ENST00000476664 DNM1Q05193 864 aaKnown RBP9.2□□□□□ -0.94
LRCH3-215ENST00000476664 TAF1CQ15572 869 aaPredicted RBP9.2□□□□□ -0.94
LRCH3-215ENST00000476664 TAF7LQ5H9L4 462 aa9.2□□□□□ -0.94
LRCH3-215ENST00000476664 RNPC3Q96LT9 517 aaKnown RBP9.2□□□□□ -0.94
LRCH3-215ENST00000476664 C2orf49Q9BVC5 232 aaPredicted RBP9.2□□□□□ -0.94
LRCH3-215ENST00000476664 TRIM55Q9BYV6 548 aa9.2□□□□□ -0.94
LRCH3-215ENST00000476664 PRDM16Q9HAZ2 1276 aa9.2□□□□□ -0.94
LRCH3-215ENST00000476664 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.2□□□□□ -0.94
LRCH3-215ENST00000476664 CHMP3Q9Y3E7 222 aa9.2□□□□□ -0.94
LRCH3-215ENST00000476664 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.2□□□□□ -0.94
LRCH3-215ENST00000476664 MED14O60244 1454 aa9.2□□□□□ -0.94
LRCH3-215ENST00000476664 A0A1W2PRU2 124 aa9.19□□□□□ -0.94
LRCH3-215ENST00000476664 ARHGAP33O14559 1287 aa9.19□□□□□ -0.94
LRCH3-215ENST00000476664 EIF1AYO14602 144 aaKnown RBP9.19□□□□□ -0.94
LRCH3-215ENST00000476664 GABBR2O75899 941 aa9.19□□□□□ -0.94
LRCH3-215ENST00000476664 ST13P50502 369 aaKnown RBP9.19□□□□□ -0.94
LRCH3-215ENST00000476664 TMED8Q6PL24 325 aaPredicted RBP9.19□□□□□ -0.94
LRCH3-215ENST00000476664 ATCAYQ86WG3 371 aa9.19□□□□□ -0.94
LRCH3-215ENST00000476664 RPUSD2Q8IZ73 545 aaKnown RBP9.19□□□□□ -0.94
LRCH3-215ENST00000476664 PCGF6Q9BYE7 350 aa9.19□□□□□ -0.94
LRCH3-215ENST00000476664 C12orf49Q9H741 205 aa9.19□□□□□ -0.94
LRCH3-215ENST00000476664 TYW1Q9NV66 732 aaKnown RBP9.19□□□□□ -0.94
LRCH3-215ENST00000476664 PLCH2O75038 1416 aa9.19□□□□□ -0.94
LRCH3-215ENST00000476664 DEPDC5O75140 1603 aa9.19□□□□□ -0.94
LRCH3-215ENST00000476664 EIF3JO75822 258 aaKnown RBP9.18□□□□□ -0.94
LRCH3-215ENST00000476664 ERBB3P21860 1342 aa9.18□□□□□ -0.94
LRCH3-215ENST00000476664 SCNN1DP51172 638 aa9.18□□□□□ -0.94
LRCH3-215ENST00000476664 SPSB2Q99619 263 aa9.18□□□□□ -0.94
LRCH3-215ENST00000476664 QTRT2Q9H974 415 aaKnown RBP9.18□□□□□ -0.94
LRCH3-215ENST00000476664 BCCIPQ9P287 314 aaKnown RBP eCLIP9.18□□□□□ -0.94
LRCH3-215ENST00000476664 V9GY48 417 aaPredicted RBP9.18□□□□□ -0.94
LRCH3-215ENST00000476664 SPATA31A6Q5VVP1 1343 aa9.17□□□□□ -0.94
LRCH3-215ENST00000476664 ZBTB39O15060 712 aa9.17□□□□□ -0.94
LRCH3-215ENST00000476664 CDC45O75419 566 aa9.17□□□□□ -0.94
LRCH3-215ENST00000476664 PDGFAP04085 211 aa9.17□□□□□ -0.94
LRCH3-215ENST00000476664 CHMP4BP1P59074 171 aa9.17□□□□□ -0.94
LRCH3-215ENST00000476664 LRP10Q7Z4F1 713 aa9.17□□□□□ -0.94
LRCH3-215ENST00000476664 SMC5Q8IY18 1101 aa9.17□□□□□ -0.94
LRCH3-215ENST00000476664 CCDC24Q8N4L8 307 aa9.17□□□□□ -0.94
LRCH3-215ENST00000476664 FAM160A2Q8N612 972 aaPredicted RBP9.17□□□□□ -0.94
LRCH3-215ENST00000476664 TTC16Q8NEE8 873 aa9.17□□□□□ -0.94
LRCH3-215ENST00000476664 EDEM1Q92611 657 aa9.17□□□□□ -0.94
LRCH3-215ENST00000476664 ZNF408Q9H9D4 720 aa9.17□□□□□ -0.94
LRCH3-215ENST00000476664 ITSN2Q9NZM3 1697 aa9.16□□□□□ -0.94
LRCH3-215ENST00000476664 NUP153P49790 1475 aaKnown RBP9.16□□□□□ -0.94
LRCH3-215ENST00000476664 INHAP05111 366 aa9.16□□□□□ -0.94
LRCH3-215ENST00000476664 HOXB1P14653 301 aaPredicted RBP9.16□□□□□ -0.94
LRCH3-215ENST00000476664 PSMA6P60900 246 aaKnown RBP9.16□□□□□ -0.94
LRCH3-215ENST00000476664 ORC1Q13415 861 aa9.16□□□□□ -0.94
LRCH3-215ENST00000476664 ARSHQ5FYA8 562 aa9.16□□□□□ -0.94
LRCH3-215ENST00000476664 ERMP1Q7Z2K6 904 aa9.16□□□□□ -0.94
LRCH3-215ENST00000476664 SLC4A9Q96Q91 983 aa9.16□□□□□ -0.94
LRCH3-215ENST00000476664 SERTAD1Q9UHV2 236 aa9.16□□□□□ -0.94
LRCH3-215ENST00000476664 LRFN2Q9ULH4 789 aa9.16□□□□□ -0.94
LRCH3-215ENST00000476664 STRIP2Q9ULQ0 834 aa9.16□□□□□ -0.94
LRCH3-215ENST00000476664 G3BP2Q9UN86 482 aaKnown RBP9.16□□□□□ -0.94
LRCH3-215ENST00000476664 VPS9D1Q9Y2B5 631 aa9.16□□□□□ -0.94
LRCH3-215ENST00000476664 COL16A1Q07092 1604 aaPredicted RBP9.16□□□□□ -0.94
LRCH3-215ENST00000476664 ABCC1P33527 1531 aa9.15□□□□□ -0.94
LRCH3-215ENST00000476664 MLH3Q9UHC1 1453 aa9.15□□□□□ -0.94
LRCH3-215ENST00000476664 CPNE3O75131 537 aaKnown RBP9.15□□□□□ -0.94
LRCH3-215ENST00000476664 RPLP1P05386 114 aaKnown RBP9.15□□□□□ -0.94
LRCH3-215ENST00000476664 ANKS3Q6ZW76 656 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms