RNA–Protein interactions for RNA: ENST00000474852.1

TPR-205, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 1 (best)

Gene TPR, Length 2,757 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-205ENST00000474852 CCDC144CPQ8IYA2 1237 aa19.3■□□□□ 0.68
TPR-205ENST00000474852 DDX19AQ9NUU7 478 aaKnown RBP19.3■□□□□ 0.68
TPR-205ENST00000474852 PPFIA3O75145 1194 aa19.3■□□□□ 0.68
TPR-205ENST00000474852 CACTINQ8WUQ7 758 aaKnown RBP19.3■□□□□ 0.68
TPR-205ENST00000474852 EID1Q9Y6B2 187 aa19.3■□□□□ 0.68
TPR-205ENST00000474852 HSP90B1P14625 803 aaKnown RBP19.29■□□□□ 0.68
TPR-205ENST00000474852 TPD52L1Q16890 204 aaPredicted RBP19.29■□□□□ 0.68
TPR-205ENST00000474852 LRRC2Q9BYS8 371 aa19.29■□□□□ 0.68
TPR-205ENST00000474852 ARID5BQ14865 1188 aa19.29■□□□□ 0.68
TPR-205ENST00000474852 PLA2G4DQ86XP0 818 aa19.29■□□□□ 0.68
TPR-205ENST00000474852 BRF1Q92994 677 aa19.29■□□□□ 0.68
TPR-205ENST00000474852 ANKRD1Q15327 319 aa19.28■□□□□ 0.68
TPR-205ENST00000474852 KAZALD1Q96I82 304 aa19.28■□□□□ 0.68
TPR-205ENST00000474852 DIP2AQ14689 1571 aa19.28■□□□□ 0.68
TPR-205ENST00000474852 NPHP4O75161 1426 aaPredicted RBP19.28■□□□□ 0.68
TPR-205ENST00000474852 H3BQV1 296 aa19.28■□□□□ 0.68
TPR-205ENST00000474852 IFFO2Q5TF58 517 aa19.28■□□□□ 0.68
TPR-205ENST00000474852 FBXW7Q969H0 707 aa19.28■□□□□ 0.68
TPR-205ENST00000474852 KSR2Q6VAB6 950 aa19.27■□□□□ 0.68
TPR-205ENST00000474852 FTOQ9C0B1 505 aaKnown RBP eCLIP19.27■□□□□ 0.68
TPR-205ENST00000474852 GRM8O00222 908 aa19.27■□□□□ 0.68
TPR-205ENST00000474852 HIP1O00291 1037 aa19.27■□□□□ 0.68
TPR-205ENST00000474852 HOXB7P09629 217 aa19.27■□□□□ 0.68
TPR-205ENST00000474852 CCDC9Q9Y3X0 531 aaKnown RBP19.27■□□□□ 0.68
TPR-205ENST00000474852 TDRD7Q8NHU6 1098 aaKnown RBP19.27■□□□□ 0.67
TPR-205ENST00000474852 RBM33Q96EV2 1170 aaKnown RBP19.27■□□□□ 0.67
TPR-205ENST00000474852 CCDC129Q6ZRS4 1044 aa19.26■□□□□ 0.67
TPR-205ENST00000474852 ALDH1L1O75891 902 aa19.26■□□□□ 0.67
TPR-205ENST00000474852 GOLGA6L19H0YKK7 550 aa19.25■□□□□ 0.67
TPR-205ENST00000474852 C11orf57Q6ZUT1 292 aaPredicted RBP19.25■□□□□ 0.67
TPR-205ENST00000474852 CCDC112Q8NEF3 446 aa19.25■□□□□ 0.67
TPR-205ENST00000474852 USP27XA6NNY8 438 aa19.25■□□□□ 0.67
TPR-205ENST00000474852 SMTNL1A8MU46 457 aa19.25■□□□□ 0.67
TPR-205ENST00000474852 ERCC4Q92889 916 aaPredicted RBP19.25■□□□□ 0.67
TPR-205ENST00000474852 GTPBP4Q9BZE4 634 aaKnown RBP19.25■□□□□ 0.67
TPR-205ENST00000474852 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.25■□□□□ 0.673e-6■■■■□ 21.5
TPR-205ENST00000474852 V9GYY5 206 aaPredicted RBP19.25■□□□□ 0.67
TPR-205ENST00000474852 Q6ZUG5 572 aa19.24■□□□□ 0.67
TPR-205ENST00000474852 SEC62Q99442 399 aaKnown RBP19.24■□□□□ 0.67
TPR-205ENST00000474852 GIGYF1O75420 1035 aaPredicted RBP19.24■□□□□ 0.67
TPR-205ENST00000474852 RBM43Q6ZSC3 357 aaKnown RBP19.24■□□□□ 0.67
TPR-205ENST00000474852 FILIP1Q7Z7B0 1213 aa19.24■□□□□ 0.67
TPR-205ENST00000474852 KLHL34Q8N239 644 aa19.24■□□□□ 0.67
TPR-205ENST00000474852 TAF5LO75529 589 aa19.23■□□□□ 0.67
TPR-205ENST00000474852 GTF3C6Q969F1 213 aa19.23■□□□□ 0.67
TPR-205ENST00000474852 MED23Q9ULK4 1368 aa19.23■□□□□ 0.67
TPR-205ENST00000474852 RESTQ13127 1097 aa19.23■□□□□ 0.67
TPR-205ENST00000474852 DNAJC2Q99543 621 aaKnown RBP19.23■□□□□ 0.67
TPR-205ENST00000474852 KCNA6P17658 529 aa19.22■□□□□ 0.67
TPR-205ENST00000474852 NEK1Q96PY6 1258 aa19.22■□□□□ 0.67
TPR-205ENST00000474852 TRMT1Q9NXH9 659 aaKnown RBP19.22■□□□□ 0.67
TPR-205ENST00000474852 NAP1L2Q9ULW6 460 aaPredicted RBP19.22■□□□□ 0.67
TPR-205ENST00000474852 USP16Q9Y5T5 823 aa19.22■□□□□ 0.67
TPR-205ENST00000474852 AKAP4Q5JQC9 854 aa19.22■□□□□ 0.67
TPR-205ENST00000474852 LINS1Q8NG48 757 aa19.22■□□□□ 0.67
TPR-205ENST00000474852 BBXQ8WY36 941 aaPredicted RBP19.22■□□□□ 0.67
TPR-205ENST00000474852 IP6K1Q92551 441 aa19.22■□□□□ 0.67
TPR-205ENST00000474852 MYL6BP14649 208 aa19.21■□□□□ 0.67
TPR-205ENST00000474852 COL15A1P39059 1388 aa19.21■□□□□ 0.67
TPR-205ENST00000474852 C1orf141Q5JVX7 400 aa19.21■□□□□ 0.67
TPR-205ENST00000474852 CEP135Q66GS9 1140 aa19.21■□□□□ 0.67
TPR-205ENST00000474852 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.21■□□□□ 0.67
TPR-205ENST00000474852 CHMP4AQ9BY43 222 aa19.21■□□□□ 0.67
TPR-205ENST00000474852 CHD2O14647 1828 aaKnown RBP19.21■□□□□ 0.67
TPR-205ENST00000474852 PDIA4P13667 645 aaKnown RBP19.21■□□□□ 0.67
TPR-205ENST00000474852 EPHA10Q5JZY3 1008 aa19.21■□□□□ 0.67
TPR-205ENST00000474852 RIC3Q7Z5B4 369 aa19.21■□□□□ 0.67
TPR-205ENST00000474852 BECN2A8MW95 431 aa19.2■□□□□ 0.66
TPR-205ENST00000474852 RNMTO43148 476 aaKnown RBP19.2■□□□□ 0.66
TPR-205ENST00000474852 GUCY1B3Q02153 619 aa19.2■□□□□ 0.66
TPR-205ENST00000474852 LRRC8AQ8IWT6 810 aa19.2■□□□□ 0.66
TPR-205ENST00000474852 HMG20BQ9P0W2 317 aa19.2■□□□□ 0.66
TPR-205ENST00000474852 KIF20AO95235 890 aa19.2■□□□□ 0.66
TPR-205ENST00000474852 SCRN1Q12765 414 aa19.2■□□□□ 0.66
TPR-205ENST00000474852 IQCB1Q15051 598 aa19.2■□□□□ 0.66
TPR-205ENST00000474852 CCAR1Q8IX12 1150 aaKnown RBP19.2■□□□□ 0.66
TPR-205ENST00000474852 CTNNA3Q9UI47 895 aa19.2■□□□□ 0.66
TPR-205ENST00000474852 MARF1Q9Y4F3 1742 aaKnown RBP19.19■□□□□ 0.66
TPR-205ENST00000474852 IGKV5-2P06315 115 aa19.19■□□□□ 0.66
TPR-205ENST00000474852 PLEKHO1Q53GL0 409 aaPredicted RBP19.19■□□□□ 0.66
TPR-205ENST00000474852 GOLPH3LQ9H4A5 285 aa19.19■□□□□ 0.66
TPR-205ENST00000474852 HDAC5Q9UQL6 1122 aa19.19■□□□□ 0.66
TPR-205ENST00000474852 KDM3BQ7LBC6 1761 aa19.19■□□□□ 0.66
TPR-205ENST00000474852 CYP21A2P08686 494 aa19.19■□□□□ 0.66
TPR-205ENST00000474852 PIP4K2AP48426 406 aaPredicted RBP19.19■□□□□ 0.66
TPR-205ENST00000474852 SLFNL1Q499Z3 407 aa19.19■□□□□ 0.66
TPR-205ENST00000474852 SNRKQ9NRH2 765 aa19.19■□□□□ 0.66
TPR-205ENST00000474852 CFAP45Q9UL16 551 aa19.19■□□□□ 0.66
TPR-205ENST00000474852 PAXBP1Q9Y5B6 917 aa19.19■□□□□ 0.66
TPR-205ENST00000474852 SKILP12757 684 aa19.18■□□□□ 0.66
TPR-205ENST00000474852 CCT2P78371 535 aaKnown RBP19.18■□□□□ 0.66
TPR-205ENST00000474852 DDX46Q7L014 1031 aaKnown RBP19.18■□□□□ 0.66
TPR-205ENST00000474852 DBNLQ9UJU6 430 aaKnown RBP19.18■□□□□ 0.66
TPR-205ENST00000474852 TBX22Q9Y458 520 aa19.18■□□□□ 0.66
TPR-205ENST00000474852 PXDNQ92626 1479 aa19.18■□□□□ 0.66
TPR-205ENST00000474852 LTN1O94822 1766 aa19.18■□□□□ 0.66
TPR-205ENST00000474852 FEZ1Q99689 392 aa19.18■□□□□ 0.66
TPR-205ENST00000474852 MED1Q15648 1581 aaPredicted RBP19.17■□□□□ 0.66
TPR-205ENST00000474852 NPHP1O15259 732 aa19.17■□□□□ 0.66
TPR-205ENST00000474852 DDX58O95786 925 aaKnown RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms