RNA–Protein interactions for RNA: ENST00000472476.5

TARDBP-204, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-204ENST00000472476 TCIRG1Q13488 830 aa18.88■□□□□ 0.61
TARDBP-204ENST00000472476 KRT24Q2M2I5 525 aa18.88■□□□□ 0.61
TARDBP-204ENST00000472476 MPNDQ8N594 471 aa18.88■□□□□ 0.61
TARDBP-204ENST00000472476 NECTIN2Q92692 538 aa18.88■□□□□ 0.61
TARDBP-204ENST00000472476 MAPK8IP3Q9UPT6 1336 aa18.88■□□□□ 0.61
TARDBP-204ENST00000472476 DDX60Q8IY21 1712 aaKnown RBP18.88■□□□□ 0.61
TARDBP-204ENST00000472476 LRRC37AA6NMS7 1700 aa18.87■□□□□ 0.61
TARDBP-204ENST00000472476 RAD17O75943 681 aa18.87■□□□□ 0.61
TARDBP-204ENST00000472476 TMPOP42166 694 aaKnown RBP18.87■□□□□ 0.61
TARDBP-204ENST00000472476 ECE1P42892 770 aa18.87■□□□□ 0.61
TARDBP-204ENST00000472476 AIMP1Q12904 312 aaKnown RBP18.87■□□□□ 0.61
TARDBP-204ENST00000472476 DPP8Q6V1X1 898 aaPredicted RBP18.87■□□□□ 0.61
TARDBP-204ENST00000472476 SUPT20HQ8NEM7 779 aa18.87■□□□□ 0.61
TARDBP-204ENST00000472476 PNNQ9H307 717 aaKnown RBP18.87■□□□□ 0.61
TARDBP-204ENST00000472476 CASP8AP2Q9UKL3 1982 aa18.86■□□□□ 0.61
TARDBP-204ENST00000472476 MAP2K2P36507 400 aa18.86■□□□□ 0.61
TARDBP-204ENST00000472476 GRM1Q13255 1194 aa18.86■□□□□ 0.61
TARDBP-204ENST00000472476 CIAPIN1Q6FI81 312 aa18.86■□□□□ 0.61
TARDBP-204ENST00000472476 DLK2Q6UY11 383 aa18.86■□□□□ 0.61
TARDBP-204ENST00000472476 TRPM4Q8TD43 1214 aa18.86■□□□□ 0.61
TARDBP-204ENST00000472476 ZNF428Q96B54 188 aa18.86■□□□□ 0.61
TARDBP-204ENST00000472476 TSKSQ9UJT2 592 aa18.86■□□□□ 0.61
TARDBP-204ENST00000472476 CHL1O00533 1208 aa18.85■□□□□ 0.61
TARDBP-204ENST00000472476 CELF2O95319 508 aaKnown RBP18.85■□□□□ 0.61
TARDBP-204ENST00000472476 GRAPQ13588 217 aa18.85■□□□□ 0.61
TARDBP-204ENST00000472476 PAXIP1Q6ZW49 1069 aaPredicted RBP18.85■□□□□ 0.61
TARDBP-204ENST00000472476 GRAPLQ8TC17 118 aaPredicted RBP18.85■□□□□ 0.61
TARDBP-204ENST00000472476 TRMT112Q9UI30 125 aaKnown RBP18.85■□□□□ 0.61
TARDBP-204ENST00000472476 ZC3H15Q8WU90 426 aaKnown RBP18.84■□□□□ 0.61
TARDBP-204ENST00000472476 SH3TC1Q8TE82 1336 aa18.83■□□□□ 0.61
TARDBP-204ENST00000472476 CDHR2Q9BYE9 1310 aa18.83■□□□□ 0.61
TARDBP-204ENST00000472476 HSP90AB3PQ58FF7 597 aa18.83■□□□□ 0.6
TARDBP-204ENST00000472476 DDX46Q7L014 1031 aaKnown RBP18.83■□□□□ 0.6
TARDBP-204ENST00000472476 HHIPL1Q96JK4 782 aa18.83■□□□□ 0.6
TARDBP-204ENST00000472476 ZIC5Q96T25 663 aa18.83■□□□□ 0.6
TARDBP-204ENST00000472476 TMX4Q9H1E5 349 aaPredicted RBP18.83■□□□□ 0.6
TARDBP-204ENST00000472476 CNOT7Q9UIV1 285 aaKnown RBP18.83■□□□□ 0.6
TARDBP-204ENST00000472476 TRIM35Q9UPQ4 493 aa18.83■□□□□ 0.6
TARDBP-204ENST00000472476 TNIP1Q15025 636 aa18.82■□□□□ 0.6
TARDBP-204ENST00000472476 ISCA1Q9BUE6 129 aa18.82■□□□□ 0.6
TARDBP-204ENST00000472476 EGFRP00533 1210 aa18.81■□□□□ 0.6
TARDBP-204ENST00000472476 RGS19P49795 217 aa18.81■□□□□ 0.6
TARDBP-204ENST00000472476 FAM161AQ3B820 660 aa18.81■□□□□ 0.6
TARDBP-204ENST00000472476 CELF1Q92879 486 aaKnown RBP18.81■□□□□ 0.6
TARDBP-204ENST00000472476 KCNQ5Q9NR82 932 aa18.81■□□□□ 0.6
TARDBP-204ENST00000472476 CHPF2Q9P2E5 772 aa18.81■□□□□ 0.6
TARDBP-204ENST00000472476 ZBTB12Q9Y330 459 aaPredicted RBP18.81■□□□□ 0.6
TARDBP-204ENST00000472476 TNRC18O15417 2968 aaPredicted RBP18.8■□□□□ 0.6
TARDBP-204ENST00000472476 SF3B3Q15393 1217 aaKnown RBP18.8■□□□□ 0.6
TARDBP-204ENST00000472476 CDC37L1Q7L3B6 337 aa18.8■□□□□ 0.6
TARDBP-204ENST00000472476 BCL2L13Q9BXK5 485 aa18.8■□□□□ 0.6
TARDBP-204ENST00000472476 POLLQ9UGP5 575 aa18.8■□□□□ 0.6
TARDBP-204ENST00000472476 SCN9AQ15858 1988 aa18.8■□□□□ 0.6
TARDBP-204ENST00000472476 PSMD14O00487 310 aa18.79■□□□□ 0.6
TARDBP-204ENST00000472476 SAMD7Q7Z3H4 446 aa18.79■□□□□ 0.6
TARDBP-204ENST00000472476 USP48Q86UV5 1035 aa18.79■□□□□ 0.6
TARDBP-204ENST00000472476 MICALL2Q8IY33 904 aa18.79■□□□□ 0.6
TARDBP-204ENST00000472476 PLBD2Q8NHP8 589 aa18.79■□□□□ 0.6
TARDBP-204ENST00000472476 DPF2Q92785 391 aa18.79■□□□□ 0.6
TARDBP-204ENST00000472476 FAM89AQ96GI7 184 aa18.79■□□□□ 0.6
TARDBP-204ENST00000472476 BEGAINQ9BUH8 593 aa18.79■□□□□ 0.6
TARDBP-204ENST00000472476 BRPF1P55201 1214 aaPredicted RBP18.78■□□□□ 0.6
TARDBP-204ENST00000472476 NEUROD2Q15784 382 aa18.78■□□□□ 0.6
TARDBP-204ENST00000472476 TMC4Q7Z404 712 aa18.78■□□□□ 0.6
TARDBP-204ENST00000472476 CCDC146Q8IYE0 955 aa18.78■□□□□ 0.6
TARDBP-204ENST00000472476 ZNF408Q9H9D4 720 aa18.78■□□□□ 0.6
TARDBP-204ENST00000472476 RTL9Q8NET4 1388 aa18.78■□□□□ 0.6
TARDBP-204ENST00000472476 CCDC85CA6NKD9 419 aa18.77■□□□□ 0.6
TARDBP-204ENST00000472476 ATP5J2-PTCD1G3V325 749 aa18.77■□□□□ 0.6
TARDBP-204ENST00000472476 GPSM2P81274 684 aa18.77■□□□□ 0.6
TARDBP-204ENST00000472476 LMOD3Q0VAK6 560 aa18.77■□□□□ 0.6
TARDBP-204ENST00000472476 RALBP1Q15311 655 aa18.77■□□□□ 0.6
TARDBP-204ENST00000472476 ANKRD13DQ6ZTN6 518 aa18.77■□□□□ 0.6
TARDBP-204ENST00000472476 DBNDD1Q9H9R9 158 aa18.77■□□□□ 0.6
TARDBP-204ENST00000472476 FAM155AB1AL88 458 aaPredicted RBP18.76■□□□□ 0.59
TARDBP-204ENST00000472476 H7C1D1 291 aa18.76■□□□□ 0.59
TARDBP-204ENST00000472476 WASHC4Q2M389 1173 aa18.76■□□□□ 0.59
TARDBP-204ENST00000472476 MCOLN1Q9GZU1 580 aa18.76■□□□□ 0.59
TARDBP-204ENST00000472476 NSFL1CQ9UNZ2 370 aaKnown RBP18.76■□□□□ 0.59
TARDBP-204ENST00000472476 RIMBP2O15034 1052 aa18.75■□□□□ 0.59
TARDBP-204ENST00000472476 CA12O43570 354 aa18.75■□□□□ 0.59
TARDBP-204ENST00000472476 TRIM28Q13263 835 aaKnown RBP18.75■□□□□ 0.59
TARDBP-204ENST00000472476 DOK7Q18PE1 504 aa18.74■□□□□ 0.59
TARDBP-204ENST00000472476 TBC1D10BQ4KMP7 808 aaPredicted RBP18.74■□□□□ 0.59
TARDBP-204ENST00000472476 HDGFL1Q5TGJ6 251 aa18.74■□□□□ 0.59
TARDBP-204ENST00000472476 LAS1LQ9Y4W2 734 aaKnown RBP18.74■□□□□ 0.59
TARDBP-204ENST00000472476 HOXB7P09629 217 aa18.73■□□□□ 0.59
TARDBP-204ENST00000472476 HUNKP57058 714 aa18.73■□□□□ 0.59
TARDBP-204ENST00000472476 RTL5Q5HYW3 569 aaPredicted RBP18.73■□□□□ 0.59
TARDBP-204ENST00000472476 TBC1D16Q8TBP0 767 aa18.73■□□□□ 0.59
TARDBP-204ENST00000472476 RUNDC1Q96C34 613 aa18.73■□□□□ 0.59
TARDBP-204ENST00000472476 DBF4Q9UBU7 674 aaPredicted RBP18.73■□□□□ 0.59
TARDBP-204ENST00000472476 ADM5C9JUS6 153 aa18.72■□□□□ 0.59
TARDBP-204ENST00000472476 C6orf229H3BNL8 230 aa18.72■□□□□ 0.59
TARDBP-204ENST00000472476 ECE2O60344 883 aa18.72■□□□□ 0.59
TARDBP-204ENST00000472476 SLC34A2O95436 690 aa18.72■□□□□ 0.59
TARDBP-204ENST00000472476 RPS8P62241 208 aaKnown RBP18.72■□□□□ 0.59
TARDBP-204ENST00000472476 NOGQ13253 232 aa18.72■□□□□ 0.59
TARDBP-204ENST00000472476 ASTN2O75129 1339 aaPredicted RBP18.72■□□□□ 0.59
TARDBP-204ENST00000472476 IRS4O14654 1257 aaPredicted RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms