RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 ARTNQ5T4W7 220 aa7.2□□□□□ -1.26
SSR3-204ENST00000467733 SLC30A3Q99726 388 aa7.2□□□□□ -1.26
SSR3-204ENST00000467733 ANKIB1Q9P2G1 1089 aa7.2□□□□□ -1.26
SSR3-204ENST00000467733 STARD13Q9Y3M8 1113 aa7.2□□□□□ -1.26
SSR3-204ENST00000467733 ZFYVE16Q7Z3T8 1539 aa7.2□□□□□ -1.26
SSR3-204ENST00000467733 RAPGEF6Q8TEU7 1601 aa7.19□□□□□ -1.26
SSR3-204ENST00000467733 FHOD3Q2V2M9 1422 aa7.19□□□□□ -1.26
SSR3-204ENST00000467733 AKNAQ7Z591 1439 aa7.19□□□□□ -1.26
SSR3-204ENST00000467733 DENND4BO75064 1496 aaPredicted RBP7.19□□□□□ -1.26
SSR3-204ENST00000467733 SETD1BQ9UPS6 1966 aaKnown RBP7.19□□□□□ -1.26
SSR3-204ENST00000467733 FAM229AH3BQW9 127 aa7.19□□□□□ -1.26
SSR3-204ENST00000467733 PSMA6P60900 246 aaKnown RBP7.19□□□□□ -1.26
SSR3-204ENST00000467733 NCOA4Q13772 614 aa7.19□□□□□ -1.26
SSR3-204ENST00000467733 FOXD4L6Q3SYB3 417 aaPredicted RBP7.19□□□□□ -1.26
SSR3-204ENST00000467733 C1orf53Q5VUE5 145 aa7.19□□□□□ -1.26
SSR3-204ENST00000467733 FOXD4L3Q6VB84 417 aaPredicted RBP7.19□□□□□ -1.26
SSR3-204ENST00000467733 TRIM50Q86XT4 487 aa7.19□□□□□ -1.26
SSR3-204ENST00000467733 BRD7Q9NPI1 651 aa7.19□□□□□ -1.26
SSR3-204ENST00000467733 YEATS2Q9ULM3 1422 aa7.18□□□□□ -1.26
SSR3-204ENST00000467733 IQSEC2Q5JU85 1478 aa7.18□□□□□ -1.26
SSR3-204ENST00000467733 ARHGEF12Q9NZN5 1544 aa7.18□□□□□ -1.26
SSR3-204ENST00000467733 LILRB5O75023 590 aa7.18□□□□□ -1.26
SSR3-204ENST00000467733 H2AFB1P0C5Y9 115 aa7.18□□□□□ -1.26
SSR3-204ENST00000467733 H2AFB2P0C5Z0 115 aa7.18□□□□□ -1.26
SSR3-204ENST00000467733 HIRAP54198 1017 aaPredicted RBP7.18□□□□□ -1.26
SSR3-204ENST00000467733 KCNQ4P56696 695 aa7.18□□□□□ -1.26
SSR3-204ENST00000467733 PRSS36Q5K4E3 855 aa7.18□□□□□ -1.26
SSR3-204ENST00000467733 WWC1Q8IX03 1113 aa7.18□□□□□ -1.26
SSR3-204ENST00000467733 C7orf43Q8WVR3 580 aa7.18□□□□□ -1.26
SSR3-204ENST00000467733 USP17L5A8MUK1 530 aa7.17□□□□□ -1.26
SSR3-204ENST00000467733 ELNP15502 786 aa7.17□□□□□ -1.26
SSR3-204ENST00000467733 MCM6Q14566 821 aa7.17□□□□□ -1.26
SSR3-204ENST00000467733 GRIK4Q16099 956 aa7.17□□□□□ -1.26
SSR3-204ENST00000467733 C20orf204Q6ZNR8 217 aa7.17□□□□□ -1.26
SSR3-204ENST00000467733 NBPF11Q86T75 865 aa7.17□□□□□ -1.26
SSR3-204ENST00000467733 CEP63Q96MT8 703 aa7.17□□□□□ -1.26
SSR3-204ENST00000467733 MAGI2Q86UL8 1455 aa7.17□□□□□ -1.26
SSR3-204ENST00000467733 SAMD9Q5K651 1589 aa7.16□□□□□ -1.26
SSR3-204ENST00000467733 LTBP4Q8N2S1 1624 aa7.16□□□□□ -1.26
SSR3-204ENST00000467733 KRTAP9-6A0A140TA67 174 aa7.16□□□□□ -1.26
SSR3-204ENST00000467733 ATP1A2P50993 1020 aa7.16□□□□□ -1.26
SSR3-204ENST00000467733 RAC1P63000 192 aa7.16□□□□□ -1.26
SSR3-204ENST00000467733 NRG1Q02297 640 aaPredicted RBP7.16□□□□□ -1.26
SSR3-204ENST00000467733 TMEM132AQ24JP5 1023 aa7.16□□□□□ -1.26
SSR3-204ENST00000467733 TBCELQ5QJ74 424 aa7.16□□□□□ -1.26
SSR3-204ENST00000467733 TRAPPC3LQ5T215 181 aa7.16□□□□□ -1.26
SSR3-204ENST00000467733 C8orf86Q6ZUL3 223 aa7.16□□□□□ -1.26
SSR3-204ENST00000467733 TNS4Q8IZW8 715 aa7.16□□□□□ -1.26
SSR3-204ENST00000467733 ALG2Q9H553 416 aa7.16□□□□□ -1.26
SSR3-204ENST00000467733 EFCC1Q9HA90 598 aa7.16□□□□□ -1.26
SSR3-204ENST00000467733 KCNH4Q9UQ05 1017 aa7.16□□□□□ -1.26
SSR3-204ENST00000467733 HECW1Q76N89 1606 aa7.16□□□□□ -1.26
SSR3-204ENST00000467733 TYRO3Q06418 890 aa7.15□□□□□ -1.26
SSR3-204ENST00000467733 ADGRE1Q14246 886 aa7.15□□□□□ -1.26
SSR3-204ENST00000467733 MBTPS1Q14703 1052 aa7.15□□□□□ -1.26
SSR3-204ENST00000467733 HIF1AQ16665 826 aa7.15□□□□□ -1.26
SSR3-204ENST00000467733 SH3PXD2AQ5TCZ1 1133 aa7.15□□□□□ -1.26
SSR3-204ENST00000467733 POTEAQ6S8J7 498 aa7.15□□□□□ -1.26
SSR3-204ENST00000467733 RAB44Q7Z6P3 723 aaPredicted RBP7.15□□□□□ -1.26
SSR3-204ENST00000467733 TXNRD3Q86VQ6 643 aa7.15□□□□□ -1.26
SSR3-204ENST00000467733 PTPRTO14522 1441 aa7.15□□□□□ -1.27
SSR3-204ENST00000467733 ARID3CA6NKF2 412 aa7.14□□□□□ -1.27
SSR3-204ENST00000467733 LRP8Q14114 963 aa7.14□□□□□ -1.27
SSR3-204ENST00000467733 UHRF1BP1Q6BDS2 1440 aa7.14□□□□□ -1.27
SSR3-204ENST00000467733 TPCN2Q8NHX9 752 aa7.14□□□□□ -1.27
SSR3-204ENST00000467733 UBE2OQ9C0C9 1292 aaKnown RBP7.14□□□□□ -1.27
SSR3-204ENST00000467733 PHACTR1Q9C0D0 580 aa7.14□□□□□ -1.27
SSR3-204ENST00000467733 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.13□□□□□ -1.274e-16■■□□□ 13.7
SSR3-204ENST00000467733 NUP153P49790 1475 aaKnown RBP7.13□□□□□ -1.27
SSR3-204ENST00000467733 A0A0A0MRY4 1105 aa7.13□□□□□ -1.27
SSR3-204ENST00000467733 M0R2N6 131 aa7.13□□□□□ -1.27
SSR3-204ENST00000467733 LENG1Q96BZ8 264 aaPredicted RBP7.13□□□□□ -1.27
SSR3-204ENST00000467733 HSH2DQ96JZ2 352 aa7.13□□□□□ -1.27
SSR3-204ENST00000467733 C3P01024 1663 aa7.12□□□□□ -1.27
SSR3-204ENST00000467733 PRXQ9BXM0 1461 aa7.12□□□□□ -1.27
SSR3-204ENST00000467733 C9orf84Q5VXU9 1444 aa7.12□□□□□ -1.27
SSR3-204ENST00000467733 SFI1A8K8P3 1242 aa7.12□□□□□ -1.27
SSR3-204ENST00000467733 SELPP16109 830 aa7.12□□□□□ -1.27
SSR3-204ENST00000467733 PLEKHM2Q8IWE5 1019 aa7.12□□□□□ -1.27
SSR3-204ENST00000467733 DEPDC4Q8N2C3 294 aa7.12□□□□□ -1.27
SSR3-204ENST00000467733 BHMTQ93088 406 aa7.12□□□□□ -1.27
SSR3-204ENST00000467733 SUSD3Q96L08 255 aa7.12□□□□□ -1.27
SSR3-204ENST00000467733 TSPAN10Q9H1Z9 355 aaPredicted RBP7.12□□□□□ -1.27
SSR3-204ENST00000467733 JPH1Q9HDC5 661 aaPredicted RBP7.12□□□□□ -1.27
SSR3-204ENST00000467733 SLC6A14Q9UN76 642 aa7.12□□□□□ -1.27
SSR3-204ENST00000467733 COG6Q9Y2V7 657 aa7.12□□□□□ -1.27
SSR3-204ENST00000467733 TBC1D8BQ0IIM8 1120 aa7.11□□□□□ -1.27
SSR3-204ENST00000467733 CCDC102BQ68D86 513 aa7.11□□□□□ -1.27
SSR3-204ENST00000467733 FAM9AQ8IZU1 332 aaPredicted RBP7.11□□□□□ -1.27
SSR3-204ENST00000467733 HCN4Q9Y3Q4 1203 aa7.11□□□□□ -1.27
SSR3-204ENST00000467733 ATP10AO60312 1499 aa7.11□□□□□ -1.27
SSR3-204ENST00000467733 MYO5CQ9NQX4 1742 aa7.1□□□□□ -1.27
SSR3-204ENST00000467733 LARGE2Q8N3Y3 721 aa7.1□□□□□ -1.27
SSR3-204ENST00000467733 MED1Q15648 1581 aaPredicted RBP7.1□□□□□ -1.27
SSR3-204ENST00000467733 REREQ9P2R6 1566 aa7.09□□□□□ -1.27
SSR3-204ENST00000467733 USP17L3A6NCW0 530 aa7.09□□□□□ -1.27
SSR3-204ENST00000467733 USP17L4A6NCW7 530 aa7.09□□□□□ -1.27
SSR3-204ENST00000467733 MLECQ14165 292 aa7.09□□□□□ -1.27
SSR3-204ENST00000467733 USP17L2Q6R6M4 530 aa7.09□□□□□ -1.27
SSR3-204ENST00000467733 USP17L1Q7RTZ2 530 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms