RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 MCTP2Q6DN12 878 aa5.85□□□□□ -1.47
EPHA3-202ENST00000452448 SAPCD2Q86UD0 394 aa5.85□□□□□ -1.47
EPHA3-202ENST00000452448 SLF2Q8IX21 1173 aa5.85□□□□□ -1.47
EPHA3-202ENST00000452448 ZNF512BQ96KM6 892 aaPredicted RBP5.85□□□□□ -1.47
EPHA3-202ENST00000452448 DEF6Q9H4E7 631 aa5.85□□□□□ -1.47
EPHA3-202ENST00000452448 PICK1Q9NRD5 415 aa5.85□□□□□ -1.47
EPHA3-202ENST00000452448 PRKAG2Q9UGJ0 569 aa5.85□□□□□ -1.47
EPHA3-202ENST00000452448 LRRC9Q6ZRR7 1453 aa5.85□□□□□ -1.47
EPHA3-202ENST00000452448 MTA2O94776 668 aa5.85□□□□□ -1.47
EPHA3-202ENST00000452448 SERPINB4P48594 390 aa5.85□□□□□ -1.47
EPHA3-202ENST00000452448 TBX4P57082 545 aa5.85□□□□□ -1.47
EPHA3-202ENST00000452448 RASSF7Q02833 373 aa5.85□□□□□ -1.47
EPHA3-202ENST00000452448 WASHC5Q12768 1159 aa5.85□□□□□ -1.47
EPHA3-202ENST00000452448 COL19A1Q14993 1142 aa5.85□□□□□ -1.47
EPHA3-202ENST00000452448 PLEKHG6Q3KR16 790 aa5.85□□□□□ -1.47
EPHA3-202ENST00000452448 AKNAD1Q5T1N1 836 aa5.85□□□□□ -1.47
EPHA3-202ENST00000452448 IER5LQ5T953 404 aa5.85□□□□□ -1.47
EPHA3-202ENST00000452448 SYNE3Q6ZMZ3 975 aa5.85□□□□□ -1.47
EPHA3-202ENST00000452448 C3orf67Q6ZVT6 689 aa5.85□□□□□ -1.47
EPHA3-202ENST00000452448 JAZF1Q86VZ6 243 aa5.85□□□□□ -1.47
EPHA3-202ENST00000452448 RPUSD2Q8IZ73 545 aaKnown RBP5.85□□□□□ -1.47
EPHA3-202ENST00000452448 CHCHD4Q8N4Q1 142 aa5.85□□□□□ -1.47
EPHA3-202ENST00000452448 VMP1Q96GC9 406 aa5.85□□□□□ -1.47
EPHA3-202ENST00000452448 BACH2Q9BYV9 841 aa5.85□□□□□ -1.47
EPHA3-202ENST00000452448 NACA2Q9H009 215 aa5.85□□□□□ -1.47
EPHA3-202ENST00000452448 ALDH8A1Q9H2A2 487 aaPredicted RBP5.85□□□□□ -1.47
EPHA3-202ENST00000452448 ZSWIM4Q9H7M6 989 aa5.85□□□□□ -1.47
EPHA3-202ENST00000452448 CD248Q9HCU0 757 aa5.85□□□□□ -1.47
EPHA3-202ENST00000452448 GINM1Q9NU53 330 aa5.85□□□□□ -1.47
EPHA3-202ENST00000452448 G3V3G9 751 aa5.84□□□□□ -1.47
EPHA3-202ENST00000452448 CDKL5O76039 1030 aa5.84□□□□□ -1.47
EPHA3-202ENST00000452448 SMARCA1P28370 1054 aa5.84□□□□□ -1.47
EPHA3-202ENST00000452448 RBM6P78332 1123 aaKnown RBP5.84□□□□□ -1.47
EPHA3-202ENST00000452448 RAD51AP2Q09MP3 1159 aa5.84□□□□□ -1.47
EPHA3-202ENST00000452448 ZCCHC8Q6NZY4 707 aaKnown RBP5.84□□□□□ -1.47
EPHA3-202ENST00000452448 NLRP13Q86W25 1043 aa5.84□□□□□ -1.47
EPHA3-202ENST00000452448 LMNTD2Q8IXW0 634 aa5.84□□□□□ -1.47
EPHA3-202ENST00000452448 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.84□□□□□ -1.47
EPHA3-202ENST00000452448 MPP4Q96JB8 637 aa5.84□□□□□ -1.47
EPHA3-202ENST00000452448 CEP63Q96MT8 703 aa5.84□□□□□ -1.47
EPHA3-202ENST00000452448 CUEDC1Q9NWM3 386 aaPredicted RBP5.84□□□□□ -1.47
EPHA3-202ENST00000452448 TMCC3Q9ULS5 477 aa5.84□□□□□ -1.47
EPHA3-202ENST00000452448 COL4A3BPQ9Y5P4 624 aa5.84□□□□□ -1.47
EPHA3-202ENST00000452448 SCINQ9Y6U3 715 aa5.84□□□□□ -1.47
EPHA3-202ENST00000452448 SLFN14P0C7P3 912 aa5.84□□□□□ -1.47
EPHA3-202ENST00000452448 MYCLP1P12525 358 aaPredicted RBP5.84□□□□□ -1.47
EPHA3-202ENST00000452448 ATP2B1P20020 1258 aa5.84□□□□□ -1.47
EPHA3-202ENST00000452448 MAP2K2P36507 400 aa5.84□□□□□ -1.47
EPHA3-202ENST00000452448 SESN3P58005 492 aa5.84□□□□□ -1.47
EPHA3-202ENST00000452448 KCTD2Q14681 263 aa5.84□□□□□ -1.47
EPHA3-202ENST00000452448 ALDH1L2Q3SY69 923 aa5.84□□□□□ -1.47
EPHA3-202ENST00000452448 ARMC3Q5W041 872 aa5.84□□□□□ -1.47
EPHA3-202ENST00000452448 NAIF1Q69YI7 327 aaPredicted RBP5.84□□□□□ -1.47
EPHA3-202ENST00000452448 KANK3Q6NY19 840 aa5.84□□□□□ -1.47
EPHA3-202ENST00000452448 FMNL3Q8IVF7 1028 aa5.84□□□□□ -1.47
EPHA3-202ENST00000452448 DRC7Q8IY82 874 aa5.84□□□□□ -1.47
EPHA3-202ENST00000452448 PTCD2Q8WV60 388 aaKnown RBP5.84□□□□□ -1.47
EPHA3-202ENST00000452448 STAG1Q8WVM7 1258 aa5.84□□□□□ -1.47
EPHA3-202ENST00000452448 BICD1Q96G01 975 aa5.84□□□□□ -1.47
EPHA3-202ENST00000452448 UNC45AQ9H3U1 944 aa5.84□□□□□ -1.47
EPHA3-202ENST00000452448 CHMP5Q9NZZ3 219 aa5.84□□□□□ -1.47
EPHA3-202ENST00000452448 TBC1D7Q9P0N9 293 aa5.84□□□□□ -1.47
EPHA3-202ENST00000452448 ATG7O95352 703 aa5.83□□□□□ -1.48
EPHA3-202ENST00000452448 MMEP08473 750 aa5.83□□□□□ -1.48
EPHA3-202ENST00000452448 IMPDH2P12268 514 aa5.83□□□□□ -1.48
EPHA3-202ENST00000452448 CA8P35219 290 aa5.83□□□□□ -1.48
EPHA3-202ENST00000452448 USP5P45974 858 aa5.83□□□□□ -1.48
EPHA3-202ENST00000452448 CLK1P49759 484 aaKnown RBP5.83□□□□□ -1.48
EPHA3-202ENST00000452448 TBC1D25Q3MII6 688 aa5.83□□□□□ -1.48
EPHA3-202ENST00000452448 B4GALNT3Q6L9W6 998 aa5.83□□□□□ -1.48
EPHA3-202ENST00000452448 SASS6Q6UVJ0 657 aa5.83□□□□□ -1.48
EPHA3-202ENST00000452448 OTUD6AQ7L8S5 288 aa5.83□□□□□ -1.48
EPHA3-202ENST00000452448 NT5DC4Q86YG4 428 aa5.83□□□□□ -1.48
EPHA3-202ENST00000452448 ANKRD20A12PQ8NF67 263 aa5.83□□□□□ -1.48
EPHA3-202ENST00000452448 CEP89Q96ST8 783 aa5.83□□□□□ -1.48
EPHA3-202ENST00000452448 ADAM33Q9BZ11 813 aa5.83□□□□□ -1.48
EPHA3-202ENST00000452448 SLC45A1Q9Y2W3 748 aa5.83□□□□□ -1.48
EPHA3-202ENST00000452448 GJA3Q9Y6H8 435 aa5.83□□□□□ -1.48
EPHA3-202ENST00000452448 SOWAHDA6NJG2 315 aa5.83□□□□□ -1.48
EPHA3-202ENST00000452448 SPDYE16A6NNV3 312 aaPredicted RBP5.83□□□□□ -1.48
EPHA3-202ENST00000452448 MYO1BO43795 1136 aa5.83□□□□□ -1.48
EPHA3-202ENST00000452448 CD53P19397 219 aa5.83□□□□□ -1.48
EPHA3-202ENST00000452448 COL9A1P20849 921 aa5.83□□□□□ -1.48
EPHA3-202ENST00000452448 MRE11P49959 708 aa5.83□□□□□ -1.48
EPHA3-202ENST00000452448 FAM160A1Q05DH4 1040 aa5.83□□□□□ -1.48
EPHA3-202ENST00000452448 PPP2R5BQ15173 497 aa5.83□□□□□ -1.48
EPHA3-202ENST00000452448 HHATQ5VTY9 493 aa5.83□□□□□ -1.48
EPHA3-202ENST00000452448 PADI6Q6TGC4 694 aa5.83□□□□□ -1.48
EPHA3-202ENST00000452448 DHRS1Q96LJ7 313 aa5.83□□□□□ -1.48
EPHA3-202ENST00000452448 AKAP2Q9Y2D5 859 aa5.83□□□□□ -1.48
EPHA3-202ENST00000452448 CFAP43Q8NDM7 1665 aa5.83□□□□□ -1.48
EPHA3-202ENST00000452448 EFCAB5A4FU69 1503 aa5.83□□□□□ -1.48
EPHA3-202ENST00000452448 CARMIL1Q5VZK9 1371 aa5.82□□□□□ -1.48
EPHA3-202ENST00000452448 KRT38O76015 456 aa5.82□□□□□ -1.48
EPHA3-202ENST00000452448 HOXB3P14651 431 aaPredicted RBP5.82□□□□□ -1.48
EPHA3-202ENST00000452448 ENPP1P22413 925 aa5.82□□□□□ -1.48
EPHA3-202ENST00000452448 MSNP26038 577 aaKnown RBP5.82□□□□□ -1.48
EPHA3-202ENST00000452448 RWDD2BP57060 319 aa5.82□□□□□ -1.48
EPHA3-202ENST00000452448 EN1Q05925 392 aaPredicted RBP5.82□□□□□ -1.48
EPHA3-202ENST00000452448 PREPLQ4J6C6 727 aaPredicted RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms