RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 NOL3O60936 208 aaKnown RBP2.52□□□□□ -2.01
USP53-202ENST00000450251 TOP1P11387 765 aaKnown RBP2.52□□□□□ -2.01
USP53-202ENST00000450251 PEX19P40855 299 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 FXR2P51116 673 aaKnown RBP eCLIP2.52□□□□□ -2.01
USP53-202ENST00000450251 MXRA7P84157 204 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 SLFN5Q08AF3 891 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 PWP2Q15269 919 aaKnown RBP2.52□□□□□ -2.01
USP53-202ENST00000450251 SYNE3Q6ZMZ3 975 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 UIMC1Q96RL1 719 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 OSBPL9Q96SU4 736 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 KIF2CQ99661 725 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 PYM1Q9BRP8 204 aaKnown RBP2.52□□□□□ -2.01
USP53-202ENST00000450251 MAGEC2Q9UBF1 373 aaPredicted RBP2.52□□□□□ -2.01
USP53-202ENST00000450251 TRIM35Q9UPQ4 493 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 FAN1Q9Y2M0 1017 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 PLXNC1O60486 1568 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 HECW2Q9P2P5 1572 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 ADAMTSL3P82987 1691 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 CARMIL1Q5VZK9 1371 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 CARMIL2Q6F5E8 1435 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 MAP3K4Q9Y6R4 1608 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 CTAGE9A4FU28 777 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 PSDA5PKW4 1024 aaPredicted RBP2.52□□□□□ -2.01
USP53-202ENST00000450251 ATP5DP30049 168 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 PPP2R3AQ06190 1150 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 HSP90AA5PQ58FG0 334 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 FOXD4L5Q5VV16 416 aaPredicted RBP2.52□□□□□ -2.01
USP53-202ENST00000450251 IQCA1Q86XH1 822 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 ZNF280CQ8ND82 737 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 FOXD4L4Q8WXT5 416 aaPredicted RBP2.52□□□□□ -2.01
USP53-202ENST00000450251 CTAGE1Q96RT6 745 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 SDF4Q9BRK5 362 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 GNL3Q9BVP2 549 aaKnown RBP eCLIP2.52□□□□□ -2.01
USP53-202ENST00000450251 TSGA10Q9BZW7 698 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 GOPCQ9HD26 462 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 UHRF1BP1Q6BDS2 1440 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 ITSN2Q9NZM3 1697 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 PAFAH1B1P43034 410 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 PRIM1P49642 420 aaKnown RBP2.52□□□□□ -2.01
USP53-202ENST00000450251 MAP3K9P80192 1104 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 NUCB1Q02818 461 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 KRT32Q14532 448 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 CLUL1Q15846 466 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 HOOK3Q86VS8 718 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 GTF3C6Q969F1 213 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 JAKMIP2Q96AA8 810 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 GBP5Q96PP8 586 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 SAMD15Q9P1V8 674 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 NPHP3Q7Z494 1330 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 PLA2R1Q13018 1463 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 RPRD2Q5VT52 1461 aaKnown RBP2.52□□□□□ -2.01
USP53-202ENST00000450251 MACROD2A1Z1Q3 448 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 FIBPO43427 364 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 USO1O60763 962 aaKnown RBP2.52□□□□□ -2.01
USP53-202ENST00000450251 PDE6BP35913 854 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 TRIM14Q14142 442 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 ALDH1L2Q3SY69 923 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 SRLQ86TD4 932 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 ARHGAP24Q8N264 748 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 MRFAP1L1Q96HT8 127 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 TSC22D3Q99576 134 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.52□□□□□ -2.01
USP53-202ENST00000450251 SSH2Q76I76 1423 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 PRXQ9BXM0 1461 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 GOLGA6CA6NDK9 693 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 SGSM2O43147 1006 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 PRC1O43663 620 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 GOLGA6DP0CG33 693 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 CHRM1P11229 460 aaPredicted RBP2.52□□□□□ -2.01
USP53-202ENST00000450251 NEK4P51957 841 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 NUBP1P53384 320 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 HNRNPH2P55795 449 aaKnown RBP2.52□□□□□ -2.01
USP53-202ENST00000450251 EVCP57679 992 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 STIM1Q13586 685 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 CCDC6Q16204 474 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 SYT10Q6XYQ8 523 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 PAF1Q8N7H5 531 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 RABGGTAQ92696 567 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 TAF4BQ92750 862 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 TBC1D31Q96DN5 1066 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 PDLIM2Q96JY6 352 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 ZNF830Q96NB3 372 aaPredicted RBP2.52□□□□□ -2.01
USP53-202ENST00000450251 RBSNQ9H1K0 784 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 CCDC68Q9H2F9 335 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 PLCB1Q9NQ66 1216 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 GOLGA6AQ9NYA3 693 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 MIS18AQ9NYP9 233 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 PAIP2BQ9ULR5 123 aaKnown RBP2.52□□□□□ -2.01
USP53-202ENST00000450251 CYP46A1Q9Y6A2 500 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 NPC1L1Q9UHC9 1359 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 DAPK1P53355 1430 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 PRAG1Q86YV5 1406 aa2.52□□□□□ -2.01
USP53-202ENST00000450251 ABCA8O94911 1581 aa2.51□□□□□ -2.01
USP53-202ENST00000450251 ERBINQ96RT1 1412 aa2.51□□□□□ -2.01
USP53-202ENST00000450251 SNUPNO95149 360 aaKnown RBP2.51□□□□□ -2.01
USP53-202ENST00000450251 LMNAP02545 664 aaKnown RBP2.51□□□□□ -2.01
USP53-202ENST00000450251 ELF1P32519 619 aa2.51□□□□□ -2.01
USP53-202ENST00000450251 MTMR3Q13615 1198 aa2.51□□□□□ -2.01
USP53-202ENST00000450251 ELF2Q15723 593 aa2.51□□□□□ -2.01
USP53-202ENST00000450251 CLEC17AQ6ZS10 378 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 300.1 ms