RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 PCDHGA11Q9Y5H2 935 aa11.94□□□□□ -0.5
SMARCE1-206ENST00000447024 TCOF1Q13428 1488 aaKnown RBP11.94□□□□□ -0.5
SMARCE1-206ENST00000447024 SHANK2Q9UPX8 1470 aa11.93□□□□□ -0.5
SMARCE1-206ENST00000447024 MROH2AA6NES4 1674 aa11.93□□□□□ -0.5
SMARCE1-206ENST00000447024 ZNF468Q5VIY5 522 aaPredicted RBP11.92□□□□□ -0.5
SMARCE1-206ENST00000447024 GJA3Q9Y6H8 435 aa11.92□□□□□ -0.5
SMARCE1-206ENST00000447024 NPATQ14207 1427 aa11.92□□□□□ -0.5
SMARCE1-206ENST00000447024 LMTK3Q96Q04 1460 aa11.91□□□□□ -0.5
SMARCE1-206ENST00000447024 PTPN23Q9H3S7 1636 aa11.91□□□□□ -0.5
SMARCE1-206ENST00000447024 PCBP4P57723 403 aaKnown RBP11.91□□□□□ -0.5
SMARCE1-206ENST00000447024 STRN4Q9NRL3 753 aa11.91□□□□□ -0.5
SMARCE1-206ENST00000447024 PARP3Q9Y6F1 533 aa11.91□□□□□ -0.5
SMARCE1-206ENST00000447024 SAMD5Q5TGI4 173 aa11.9□□□□□ -0.5
SMARCE1-206ENST00000447024 PRR12Q9ULL5 1215 aa11.9□□□□□ -0.5
SMARCE1-206ENST00000447024 ZMYM3Q14202 1370 aa11.9□□□□□ -0.5
SMARCE1-206ENST00000447024 TXLNAP40222 546 aa11.89□□□□□ -0.51
SMARCE1-206ENST00000447024 MCM6Q14566 821 aa11.89□□□□□ -0.51
SMARCE1-206ENST00000447024 EML3Q32P44 896 aa11.89□□□□□ -0.51
SMARCE1-206ENST00000447024 TPRNQ4KMQ1 711 aa11.89□□□□□ -0.51
SMARCE1-206ENST00000447024 GGT6Q6P531 493 aa11.89□□□□□ -0.51
SMARCE1-206ENST00000447024 BICDL1Q6ZP65 573 aa11.89□□□□□ -0.51
SMARCE1-206ENST00000447024 TRIM11Q96F44 468 aa11.89□□□□□ -0.51
SMARCE1-206ENST00000447024 MARK1Q9P0L2 795 aa11.89□□□□□ -0.51
SMARCE1-206ENST00000447024 C3P01024 1663 aa11.88□□□□□ -0.51
SMARCE1-206ENST00000447024 PREX1Q8TCU6 1659 aa11.88□□□□□ -0.51
SMARCE1-206ENST00000447024 ABCC5O15440 1437 aa11.88□□□□□ -0.51
SMARCE1-206ENST00000447024 DUOX2Q9NRD8 1548 aa11.88□□□□□ -0.51
SMARCE1-206ENST00000447024 KIF3BO15066 747 aa11.88□□□□□ -0.51
SMARCE1-206ENST00000447024 EFSO43281 561 aa11.88□□□□□ -0.51
SMARCE1-206ENST00000447024 Q8N3U1 123 aa11.88□□□□□ -0.51
SMARCE1-206ENST00000447024 DNMT1P26358 1616 aaKnown RBP11.88□□□□□ -0.51
SMARCE1-206ENST00000447024 EIF2AK4Q9P2K8 1649 aaKnown RBP11.88□□□□□ -0.51
SMARCE1-206ENST00000447024 DAPK1P53355 1430 aa11.87□□□□□ -0.51
SMARCE1-206ENST00000447024 UHRF1BP1Q6BDS2 1440 aa11.87□□□□□ -0.51
SMARCE1-206ENST00000447024 BACH1O14867 736 aa11.87□□□□□ -0.51
SMARCE1-206ENST00000447024 ZDHHC1Q8WTX9 485 aa11.87□□□□□ -0.51
SMARCE1-206ENST00000447024 SKIP12755 728 aa11.86□□□□□ -0.51
SMARCE1-206ENST00000447024 CEBPAP49715 358 aaPredicted RBP11.86□□□□□ -0.51
SMARCE1-206ENST00000447024 GTF2IP78347 998 aa11.86□□□□□ -0.51
SMARCE1-206ENST00000447024 LAMC2Q13753 1193 aa11.86□□□□□ -0.51
SMARCE1-206ENST00000447024 ZNF358Q9NW07 568 aa11.86□□□□□ -0.51
SMARCE1-206ENST00000447024 SCHIP1Q9P0W5 487 aaPredicted RBP11.86□□□□□ -0.51
SMARCE1-206ENST00000447024 NOD1Q9Y239 953 aa11.86□□□□□ -0.51
SMARCE1-206ENST00000447024 ANKRD30AQ9BXX3 1397 aa11.86□□□□□ -0.51
SMARCE1-206ENST00000447024 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.86□□□□□ -0.51
SMARCE1-206ENST00000447024 CROCC2H7BZ55 1655 aa11.86□□□□□ -0.51
SMARCE1-206ENST00000447024 ERBINQ96RT1 1412 aa11.86□□□□□ -0.51
SMARCE1-206ENST00000447024 KIF15Q9NS87 1388 aa11.85□□□□□ -0.51
SMARCE1-206ENST00000447024 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.85□□□□□ -0.51
SMARCE1-206ENST00000447024 PLVAPQ9BX97 442 aa11.85□□□□□ -0.51
SMARCE1-206ENST00000447024 RNF17Q9BXT8 1623 aaKnown RBP11.85□□□□□ -0.51
SMARCE1-206ENST00000447024 KDM5DQ9BY66 1539 aa11.85□□□□□ -0.51
SMARCE1-206ENST00000447024 COG6Q9Y2V7 657 aa11.84□□□□□ -0.51
SMARCE1-206ENST00000447024 WASHC2CQ9Y4E1 1318 aa11.84□□□□□ -0.51
SMARCE1-206ENST00000447024 ADGRL2O95490 1459 aa11.83□□□□□ -0.52
SMARCE1-206ENST00000447024 ELOA3CA0A087WX78 387 aaPredicted RBP11.83□□□□□ -0.52
SMARCE1-206ENST00000447024 ELOA3DA6NLF2 546 aaPredicted RBP11.83□□□□□ -0.52
SMARCE1-206ENST00000447024 PSME1Q06323 249 aa11.83□□□□□ -0.52
SMARCE1-206ENST00000447024 ELOA3BQ3SY89 546 aa11.83□□□□□ -0.52
SMARCE1-206ENST00000447024 SYT9Q86SS6 491 aa11.83□□□□□ -0.52
SMARCE1-206ENST00000447024 ELOA3Q8NG57 546 aa11.83□□□□□ -0.52
SMARCE1-206ENST00000447024 L3MBTL2Q969R5 705 aa11.83□□□□□ -0.52
SMARCE1-206ENST00000447024 CLTCQ00610 1675 aaKnown RBP11.83□□□□□ -0.52
SMARCE1-206ENST00000447024 PTPRKQ15262 1439 aa11.83□□□□□ -0.52
SMARCE1-206ENST00000447024 NCOA1Q15788 1441 aa11.83□□□□□ -0.52
SMARCE1-206ENST00000447024 SPATA31C1P0DKV0 1188 aa11.82□□□□□ -0.52
SMARCE1-206ENST00000447024 ITGB7P26010 798 aa11.82□□□□□ -0.52
SMARCE1-206ENST00000447024 EPHA4P54764 986 aa11.82□□□□□ -0.52
SMARCE1-206ENST00000447024 NCOA4Q13772 614 aa11.82□□□□□ -0.52
SMARCE1-206ENST00000447024 DOC2BQ14184 412 aa11.82□□□□□ -0.52
SMARCE1-206ENST00000447024 TEAD4Q15561 434 aa11.82□□□□□ -0.52
SMARCE1-206ENST00000447024 MDFIQ99750 246 aa11.82□□□□□ -0.52
SMARCE1-206ENST00000447024 ZC3H13Q5T200 1668 aaKnown RBP11.81□□□□□ -0.52
SMARCE1-206ENST00000447024 EML1O00423 815 aa11.81□□□□□ -0.52
SMARCE1-206ENST00000447024 LZTS3O60299 673 aaPredicted RBP11.81□□□□□ -0.52
SMARCE1-206ENST00000447024 NOS2P35228 1153 aa11.81□□□□□ -0.52
SMARCE1-206ENST00000447024 FAM50AQ14320 339 aaKnown RBP11.81□□□□□ -0.52
SMARCE1-206ENST00000447024 LRRC69Q6ZNQ3 347 aa11.81□□□□□ -0.52
SMARCE1-206ENST00000447024 ALG2Q9H553 416 aa11.81□□□□□ -0.52
SMARCE1-206ENST00000447024 PZPP20742 1482 aa11.81□□□□□ -0.52
SMARCE1-206ENST00000447024 SLC9A9Q8IVB4 645 aa11.8□□□□□ -0.52
SMARCE1-206ENST00000447024 NFATC2IPQ8NCF5 419 aa11.8□□□□□ -0.52
SMARCE1-206ENST00000447024 ROCK1Q13464 1354 aa11.79□□□□□ -0.52
SMARCE1-206ENST00000447024 GATA4P43694 442 aa11.79□□□□□ -0.52
SMARCE1-206ENST00000447024 HSPA2P54652 639 aa11.79□□□□□ -0.52
SMARCE1-206ENST00000447024 TBCELQ5QJ74 424 aa11.79□□□□□ -0.52
SMARCE1-206ENST00000447024 RRP7BPQ9NSQ0 103 aa11.79□□□□□ -0.52
SMARCE1-206ENST00000447024 KANK1Q14678 1352 aa11.79□□□□□ -0.52
SMARCE1-206ENST00000447024 ARHGAP31Q2M1Z3 1444 aa11.78□□□□□ -0.52
SMARCE1-206ENST00000447024 PRDM15P57071 1507 aaPredicted RBP11.78□□□□□ -0.52
SMARCE1-206ENST00000447024 ALAS2P22557 587 aa11.78□□□□□ -0.52
SMARCE1-206ENST00000447024 SEMA6BQ9H3T3 888 aa11.78□□□□□ -0.52
SMARCE1-206ENST00000447024 ZNF232Q9UNY5 417 aa11.78□□□□□ -0.52
SMARCE1-206ENST00000447024 ZNF142P52746 1687 aaPredicted RBP11.78□□□□□ -0.52
SMARCE1-206ENST00000447024 ABCC3O15438 1527 aa11.77□□□□□ -0.52
SMARCE1-206ENST00000447024 USP17L5A8MUK1 530 aa11.77□□□□□ -0.53
SMARCE1-206ENST00000447024 SIN3BO75182 1162 aa11.77□□□□□ -0.53
SMARCE1-206ENST00000447024 SH3PXD2AQ5TCZ1 1133 aa11.77□□□□□ -0.53
SMARCE1-206ENST00000447024 TNS4Q8IZW8 715 aa11.77□□□□□ -0.53
SMARCE1-206ENST00000447024 DEPDC4Q8N2C3 294 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms