RNA–Protein interactions for RNA: ENST00000425688.1

AC009495.3-201, humanhuman

TSL 3 BASIC

Gene AC009495.3, Length 779 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009495.3-201ENST00000425688 AKAP4Q5JQC9 854 aa9.77□□□□□ -0.85
AC009495.3-201ENST00000425688 USHBP1Q8N6Y0 703 aa9.77□□□□□ -0.85
AC009495.3-201ENST00000425688 CDCA7LQ96GN5 454 aa9.77□□□□□ -0.85
AC009495.3-201ENST00000425688 TMOD3Q9NYL9 352 aa9.77□□□□□ -0.85
AC009495.3-201ENST00000425688 RGPD2P0DJD1 1756 aa9.77□□□□□ -0.85
AC009495.3-201ENST00000425688 RANBP2P49792 3224 aaKnown RBP9.77□□□□□ -0.85
AC009495.3-201ENST00000425688 SLC4A9Q96Q91 983 aa9.76□□□□□ -0.85
AC009495.3-201ENST00000425688 ATG3Q9NT62 314 aa9.76□□□□□ -0.85
AC009495.3-201ENST00000425688 UNC80Q8N2C7 3258 aa9.75□□□□□ -0.85
AC009495.3-201ENST00000425688 GNAT3A8MTJ3 354 aa9.75□□□□□ -0.85
AC009495.3-201ENST00000425688 RTF1Q92541 710 aaKnown RBP9.75□□□□□ -0.85
AC009495.3-201ENST00000425688 COL25A1Q9BXS0 654 aaPredicted RBP9.75□□□□□ -0.85
AC009495.3-201ENST00000425688 IFT57Q9NWB7 429 aa9.75□□□□□ -0.85
AC009495.3-201ENST00000425688 TRPA1O75762 1119 aa9.74□□□□□ -0.85
AC009495.3-201ENST00000425688 CELF2O95319 508 aaKnown RBP9.74□□□□□ -0.85
AC009495.3-201ENST00000425688 CT47B1P0C2W7 299 aaPredicted RBP9.74□□□□□ -0.85
AC009495.3-201ENST00000425688 ZNF853P0CG23 659 aa9.74□□□□□ -0.85
AC009495.3-201ENST00000425688 GNAI1P63096 354 aa9.74□□□□□ -0.85
AC009495.3-201ENST00000425688 NKX1-1Q15270 411 aaPredicted RBP9.74□□□□□ -0.85
AC009495.3-201ENST00000425688 BICDL1Q6ZP65 573 aa9.74□□□□□ -0.85
AC009495.3-201ENST00000425688 ZNF622Q969S3 477 aaKnown RBP eCLIP9.74□□□□□ -0.85
AC009495.3-201ENST00000425688 BABAM1Q9NWV8 329 aa9.74□□□□□ -0.85
AC009495.3-201ENST00000425688 SPG7Q9UQ90 795 aa9.74□□□□□ -0.85
AC009495.3-201ENST00000425688 COL5A3P25940 1745 aaPredicted RBP9.73□□□□□ -0.85
AC009495.3-201ENST00000425688 BRCA2P51587 3418 aa9.73□□□□□ -0.85
AC009495.3-201ENST00000425688 HOXB3P14651 431 aaPredicted RBP9.73□□□□□ -0.85
AC009495.3-201ENST00000425688 RNF186Q9NXI6 227 aa9.73□□□□□ -0.85
AC009495.3-201ENST00000425688 DLG5Q8TDM6 1919 aa9.73□□□□□ -0.85
AC009495.3-201ENST00000425688 MYH14Q7Z406 1995 aaKnown RBP9.73□□□□□ -0.85
AC009495.3-201ENST00000425688 ZNF831Q5JPB2 1677 aa9.73□□□□□ -0.85
AC009495.3-201ENST00000425688 CARMIL3Q8ND23 1372 aa9.73□□□□□ -0.85
AC009495.3-201ENST00000425688 NRXN2Q9P2S2 1712 aa9.73□□□□□ -0.85
AC009495.3-201ENST00000425688 AFDNP55196 1824 aaKnown RBP9.72□□□□□ -0.85
AC009495.3-201ENST00000425688 NFIXQ14938 502 aa9.72□□□□□ -0.85
AC009495.3-201ENST00000425688 C1orf141Q5JVX7 400 aa9.72□□□□□ -0.85
AC009495.3-201ENST00000425688 ZNF530Q6P9A1 599 aaPredicted RBP9.72□□□□□ -0.85
AC009495.3-201ENST00000425688 MARVELD3Q96A59 401 aa9.72□□□□□ -0.85
AC009495.3-201ENST00000425688 RCAN3Q9UKA8 241 aa9.72□□□□□ -0.85
AC009495.3-201ENST00000425688 CEMIPQ8WUJ3 1361 aa9.72□□□□□ -0.85
AC009495.3-201ENST00000425688 CHL1O00533 1208 aa9.71□□□□□ -0.86
AC009495.3-201ENST00000425688 PPP1R37O75864 691 aa9.71□□□□□ -0.86
AC009495.3-201ENST00000425688 SERPINB2P05120 415 aa9.71□□□□□ -0.86
AC009495.3-201ENST00000425688 HSP90AB1P08238 724 aaKnown RBP9.71□□□□□ -0.86
AC009495.3-201ENST00000425688 SOGA3Q5TF21 947 aa9.71□□□□□ -0.86
AC009495.3-201ENST00000425688 GPC2Q8N158 579 aa9.71□□□□□ -0.86
AC009495.3-201ENST00000425688 ZNF428Q96B54 188 aa9.71□□□□□ -0.86
AC009495.3-201ENST00000425688 FANCIQ9NVI1 1328 aa9.71□□□□□ -0.86
AC009495.3-201ENST00000425688 VCANP13611 3396 aa9.71□□□□□ -0.86
AC009495.3-201ENST00000425688 USPL1Q5W0Q7 1092 aa9.7□□□□□ -0.86
AC009495.3-201ENST00000425688 FBXO46Q6PJ61 603 aaPredicted RBP9.7□□□□□ -0.86
AC009495.3-201ENST00000425688 MCM10Q7L590 875 aa9.7□□□□□ -0.86
AC009495.3-201ENST00000425688 IFNL2Q8IZJ0 200 aa9.7□□□□□ -0.86
AC009495.3-201ENST00000425688 IL17REQ8NFR9 667 aa9.7□□□□□ -0.86
AC009495.3-201ENST00000425688 PRDM6Q9NQX0 595 aa9.7□□□□□ -0.86
AC009495.3-201ENST00000425688 PDZRN3Q9UPQ7 1066 aa9.7□□□□□ -0.86
AC009495.3-201ENST00000425688 FZD9O00144 591 aa9.69□□□□□ -0.86
AC009495.3-201ENST00000425688 ZPR1O75312 459 aa9.69□□□□□ -0.86
AC009495.3-201ENST00000425688 PHKG2P15735 406 aa9.69□□□□□ -0.86
AC009495.3-201ENST00000425688 LMOD1P29536 600 aaPredicted RBP9.69□□□□□ -0.86
AC009495.3-201ENST00000425688 CRKLP46109 303 aaKnown RBP9.69□□□□□ -0.86
AC009495.3-201ENST00000425688 KIF23Q02241 960 aaPredicted RBP9.69□□□□□ -0.86
AC009495.3-201ENST00000425688 DCTN1Q14203 1278 aa9.69□□□□□ -0.86
AC009495.3-201ENST00000425688 TAF7Q15545 349 aaPredicted RBP9.69□□□□□ -0.86
AC009495.3-201ENST00000425688 SYNE4Q8N205 404 aa9.69□□□□□ -0.86
AC009495.3-201ENST00000425688 THUMPD2Q9BTF0 503 aaKnown RBP9.69□□□□□ -0.86
AC009495.3-201ENST00000425688 HDAC9Q9UKV0 1011 aa9.69□□□□□ -0.86
AC009495.3-201ENST00000425688 SUPT16HQ9Y5B9 1047 aaKnown RBP9.69□□□□□ -0.86
AC009495.3-201ENST00000425688 SCN11AQ9UI33 1791 aa9.68□□□□□ -0.86
AC009495.3-201ENST00000425688 SOS1Q07889 1333 aaPredicted RBP9.68□□□□□ -0.86
AC009495.3-201ENST00000425688 FAM155AB1AL88 458 aaPredicted RBP9.68□□□□□ -0.86
AC009495.3-201ENST00000425688 RNMTO43148 476 aaKnown RBP9.68□□□□□ -0.86
AC009495.3-201ENST00000425688 EPS15P42566 896 aa9.68□□□□□ -0.86
AC009495.3-201ENST00000425688 USP50Q70EL3 339 aaPredicted RBP9.68□□□□□ -0.86
AC009495.3-201ENST00000425688 TSR2Q969E8 191 aaKnown RBP9.68□□□□□ -0.86
AC009495.3-201ENST00000425688 ZNF408Q9H9D4 720 aa9.68□□□□□ -0.86
AC009495.3-201ENST00000425688 ZNF277Q9NRM2 450 aaPredicted RBP9.68□□□□□ -0.86
AC009495.3-201ENST00000425688 MBIPQ9NS73 344 aa9.68□□□□□ -0.86
AC009495.3-201ENST00000425688 HTTP42858 3142 aa9.67□□□□□ -0.86
AC009495.3-201ENST00000425688 KIAA0100Q14667 2235 aaKnown RBP9.67□□□□□ -0.86
AC009495.3-201ENST00000425688 LAMA3Q16787 3333 aa9.67□□□□□ -0.86
AC009495.3-201ENST00000425688 H0YGN5 161 aa9.67□□□□□ -0.86
AC009495.3-201ENST00000425688 NEFLP07196 543 aa9.67□□□□□ -0.86
AC009495.3-201ENST00000425688 HUNKP57058 714 aa9.67□□□□□ -0.86
AC009495.3-201ENST00000425688 EXOSC9Q06265 439 aaKnown RBP9.67□□□□□ -0.86
AC009495.3-201ENST00000425688 ERICH6BQ5W0A0 696 aa9.67□□□□□ -0.86
AC009495.3-201ENST00000425688 PRPF40BQ6NWY9 871 aaKnown RBP9.67□□□□□ -0.86
AC009495.3-201ENST00000425688 CDAN1Q8IWY9 1227 aa9.67□□□□□ -0.86
AC009495.3-201ENST00000425688 PLSCR2Q9NRY7 297 aa9.67□□□□□ -0.86
AC009495.3-201ENST00000425688 RBM27Q9P2N5 1060 aaKnown RBP9.67□□□□□ -0.86
AC009495.3-201ENST00000425688 LAS1LQ9Y4W2 734 aaKnown RBP9.67□□□□□ -0.86
AC009495.3-201ENST00000425688 COL11A2P13942 1736 aaPredicted RBP9.66□□□□□ -0.86
AC009495.3-201ENST00000425688 PDE6BP35913 854 aa9.66□□□□□ -0.86
AC009495.3-201ENST00000425688 SCNN1DP51172 638 aa9.66□□□□□ -0.86
AC009495.3-201ENST00000425688 RARSP54136 660 aaKnown RBP9.66□□□□□ -0.86
AC009495.3-201ENST00000425688 FKBP4Q02790 459 aaKnown RBP eCLIP9.66□□□□□ -0.86
AC009495.3-201ENST00000425688 TEFQ10587 303 aa9.66□□□□□ -0.86
AC009495.3-201ENST00000425688 DOK7Q18PE1 504 aa9.66□□□□□ -0.86
AC009495.3-201ENST00000425688 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.66□□□□□ -0.86
AC009495.3-201ENST00000425688 CNKSR1Q969H4 720 aa9.66□□□□□ -0.86
AC009495.3-201ENST00000425688 BRIP1Q9BX63 1249 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms