RNA–Protein interactions for RNA: ENST00000425688.1

AC009495.3-201, humanhuman

TSL 3 BASIC

Gene AC009495.3, Length 779 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009495.3-201ENST00000425688 AEBP2Q6ZN18 517 aaPredicted RBP21.54■■□□□ 1.04
AC009495.3-201ENST00000425688 CHIC1Q5VXU3 224 aa20.65■□□□□ 0.9
AC009495.3-201ENST00000425688 SENP3Q9H4L4 574 aaPredicted RBP18.29■□□□□ 0.52
AC009495.3-201ENST00000425688 PHF23Q9BUL5 403 aaPredicted RBP18.14■□□□□ 0.49
AC009495.3-201ENST00000425688 NISCHQ9Y2I1 1504 aa17.98■□□□□ 0.47
AC009495.3-201ENST00000425688 ABCC9O60706 1549 aa17.58■□□□□ 0.41
AC009495.3-201ENST00000425688 DNAJC5BQ9UF47 199 aa17.42■□□□□ 0.38
AC009495.3-201ENST00000425688 FOXD1Q16676 465 aa17.05■□□□□ 0.32
AC009495.3-201ENST00000425688 DNAJC5Q9H3Z4 198 aa16.73■□□□□ 0.27
AC009495.3-201ENST00000425688 PLPPR3Q6T4P5 718 aa16.59■□□□□ 0.25
AC009495.3-201ENST00000425688 CCDC180Q9P1Z9 1646 aa16.55■□□□□ 0.24
AC009495.3-201ENST00000425688 RB1CC1Q8TDY2 1594 aa16.26■□□□□ 0.19
AC009495.3-201ENST00000425688 PABPN1Q86U42 306 aaKnown RBP eCLIP16.21■□□□□ 0.19
AC009495.3-201ENST00000425688 PPP6R1Q9UPN7 881 aa16.14■□□□□ 0.17
AC009495.3-201ENST00000425688 ADRA2BP18089 450 aa16.1■□□□□ 0.17
AC009495.3-201ENST00000425688 PIAS4Q8N2W9 510 aaPredicted RBP15.98■□□□□ 0.15
AC009495.3-201ENST00000425688 CECR2Q9BXF3 1484 aa15.95■□□□□ 0.14
AC009495.3-201ENST00000425688 NACADO15069 1562 aa15.92■□□□□ 0.14
AC009495.3-201ENST00000425688 UNC13AQ9UPW8 1703 aa15.85■□□□□ 0.13
AC009495.3-201ENST00000425688 BICRAQ9NZM4 1560 aa15.83■□□□□ 0.13
AC009495.3-201ENST00000425688 MSH5O43196 834 aa15.83■□□□□ 0.12
AC009495.3-201ENST00000425688 CC2D2AQ9P2K1 1620 aa15.81■□□□□ 0.12
AC009495.3-201ENST00000425688 DCAF8L2P0C7V8 631 aa15.61■□□□□ 0.09
AC009495.3-201ENST00000425688 CUX2O14529 1486 aa15.58■□□□□ 0.08
AC009495.3-201ENST00000425688 TRIM41Q8WV44 630 aa15.57■□□□□ 0.08
AC009495.3-201ENST00000425688 SHROOM4Q9ULL8 1493 aa15.54■□□□□ 0.08
AC009495.3-201ENST00000425688 EIF4G1Q04637 1599 aaKnown RBP15.53■□□□□ 0.08
AC009495.3-201ENST00000425688 MYO15BQ96JP2 1530 aa15.37■□□□□ 0.05
AC009495.3-201ENST00000425688 ERCC6Q03468 1493 aa15.25■□□□□ 0.03
AC009495.3-201ENST00000425688 POTEDQ86YR6 584 aa15.1■□□□□ 0.01
AC009495.3-201ENST00000425688 SCRIBQ14160 1630 aa15.06■□□□□ 0
AC009495.3-201ENST00000425688 THOC2Q8NI27 1593 aaKnown RBP14.85□□□□□ -0.03
AC009495.3-201ENST00000425688 NESP48681 1621 aa14.81□□□□□ -0.04
AC009495.3-201ENST00000425688 DCAF1Q9Y4B6 1507 aa14.8□□□□□ -0.04
AC009495.3-201ENST00000425688 MAPK8IP2Q13387 824 aaPredicted RBP14.73□□□□□ -0.05
AC009495.3-201ENST00000425688 NCAPD3P42695 1498 aa14.73□□□□□ -0.05
AC009495.3-201ENST00000425688 ZCCHC6Q5VYS8 1495 aaKnown RBP14.69□□□□□ -0.06
AC009495.3-201ENST00000425688 OSCARQ8IYS5 282 aa14.69□□□□□ -0.06
AC009495.3-201ENST00000425688 SCAF1Q9H7N4 1312 aaKnown RBP14.67□□□□□ -0.06
AC009495.3-201ENST00000425688 SMARCA2P51531 1590 aa14.67□□□□□ -0.06
AC009495.3-201ENST00000425688 BAZ1AQ9NRL2 1556 aaPredicted RBP14.66□□□□□ -0.06
AC009495.3-201ENST00000425688 RIMBP3CA6NJZ7 1639 aa14.59□□□□□ -0.07
AC009495.3-201ENST00000425688 RIMBP3BA6NNM3 1639 aa14.59□□□□□ -0.07
AC009495.3-201ENST00000425688 RIMBP3Q9UFD9 1639 aa14.59□□□□□ -0.07
AC009495.3-201ENST00000425688 PPP4R3CPQ6ZMV5 832 aa14.59□□□□□ -0.07
AC009495.3-201ENST00000425688 TRHP20396 242 aaPredicted RBP14.58□□□□□ -0.08
AC009495.3-201ENST00000425688 DMRT2Q9Y5R5 561 aa14.55□□□□□ -0.08
AC009495.3-201ENST00000425688 ATAD2BQ9ULI0 1458 aa14.54□□□□□ -0.08
AC009495.3-201ENST00000425688 KIF21AQ7Z4S6 1674 aa14.54□□□□□ -0.08
AC009495.3-201ENST00000425688 LAMC3Q9Y6N6 1575 aa14.52□□□□□ -0.08
AC009495.3-201ENST00000425688 HMGXB3Q12766 1538 aa14.51□□□□□ -0.09
AC009495.3-201ENST00000425688 PDS5BQ9NTI5 1447 aa14.5□□□□□ -0.09
AC009495.3-201ENST00000425688 ILDR1Q86SU0 546 aaPredicted RBP14.49□□□□□ -0.09
AC009495.3-201ENST00000425688 ARHGEF11O15085 1522 aa14.46□□□□□ -0.09
AC009495.3-201ENST00000425688 MRC2Q9UBG0 1479 aa14.44□□□□□ -0.1
AC009495.3-201ENST00000425688 WDR62O43379 1518 aa14.43□□□□□ -0.1
AC009495.3-201ENST00000425688 CYB5RLQ6IPT4 315 aa14.42□□□□□ -0.1
AC009495.3-201ENST00000425688 BAZ1BQ9UIG0 1483 aaKnown RBP14.32□□□□□ -0.12
AC009495.3-201ENST00000425688 ARAP1Q96P48 1450 aa14.25□□□□□ -0.13
AC009495.3-201ENST00000425688 CNKSR2Q8WXI2 1034 aa14.25□□□□□ -0.13
AC009495.3-201ENST00000425688 SMARCA4P51532 1647 aa14.23□□□□□ -0.13
AC009495.3-201ENST00000425688 CADPSQ9ULU8 1353 aa14.22□□□□□ -0.13
AC009495.3-201ENST00000425688 CEP164Q9UPV0 1460 aa14.17□□□□□ -0.14
AC009495.3-201ENST00000425688 PEG3Q9GZU2 1588 aa14.11□□□□□ -0.15
AC009495.3-201ENST00000425688 HOXD11P31277 338 aaPredicted RBP14.1□□□□□ -0.15
AC009495.3-201ENST00000425688 NCBP3Q53F19 620 aaKnown RBP14.07□□□□□ -0.16
AC009495.3-201ENST00000425688 RSF1Q96T23 1441 aaPredicted RBP14.07□□□□□ -0.16
AC009495.3-201ENST00000425688 FANCD2Q9BXW9 1451 aa14.06□□□□□ -0.16
AC009495.3-201ENST00000425688 RNF216Q9NWF9 866 aaPredicted RBP14.05□□□□□ -0.16
AC009495.3-201ENST00000425688 URB2Q14146 1524 aaKnown RBP14.01□□□□□ -0.17
AC009495.3-201ENST00000425688 ZNF608Q9ULD9 1512 aaPredicted RBP14.01□□□□□ -0.17
AC009495.3-201ENST00000425688 DCAF8L1A6NGE4 600 aa13.96□□□□□ -0.17
AC009495.3-201ENST00000425688 IFT140Q96RY7 1462 aa13.93□□□□□ -0.18
AC009495.3-201ENST00000425688 CHD1O14646 1710 aa13.92□□□□□ -0.18
AC009495.3-201ENST00000425688 NPM3O75607 178 aaKnown RBP13.9□□□□□ -0.18
AC009495.3-201ENST00000425688 KDM4FA0A1W2PPD8 638 aa13.88□□□□□ -0.19
AC009495.3-201ENST00000425688 FBLN2P98095 1184 aa13.86□□□□□ -0.19
AC009495.3-201ENST00000425688 EIF4G3O43432 1585 aaKnown RBP13.86□□□□□ -0.19
AC009495.3-201ENST00000425688 MROH2BQ7Z745 1585 aa13.85□□□□□ -0.19
AC009495.3-201ENST00000425688 KCNA4P22459 653 aa13.85□□□□□ -0.19
AC009495.3-201ENST00000425688 CFTRP13569 1480 aa13.85□□□□□ -0.19
AC009495.3-201ENST00000425688 CLASP1Q7Z460 1538 aa13.78□□□□□ -0.2
AC009495.3-201ENST00000425688 AQRO60306 1485 aaKnown RBP eCLIP13.75□□□□□ -0.21
AC009495.3-201ENST00000425688 FBXO41Q8TF61 875 aa13.75□□□□□ -0.21
AC009495.3-201ENST00000425688 ERCC6L2Q5T890 1561 aa13.73□□□□□ -0.21
AC009495.3-201ENST00000425688 GAPVD1Q14C86 1478 aa13.73□□□□□ -0.21
AC009495.3-201ENST00000425688 LMTK3Q96Q04 1460 aa13.71□□□□□ -0.21
AC009495.3-201ENST00000425688 TOPBP1Q92547 1522 aa13.68□□□□□ -0.22
AC009495.3-201ENST00000425688 SYNJ1O43426 1573 aa13.66□□□□□ -0.22
AC009495.3-201ENST00000425688 HECW2Q9P2P5 1572 aa13.65□□□□□ -0.22
AC009495.3-201ENST00000425688 SOCS7O14512 581 aa13.64□□□□□ -0.23
AC009495.3-201ENST00000425688 KIF13AQ9H1H9 1805 aa13.63□□□□□ -0.23
AC009495.3-201ENST00000425688 TARBP1Q13395 1621 aaKnown RBP13.62□□□□□ -0.23
AC009495.3-201ENST00000425688 WIZO95785 1651 aa13.6□□□□□ -0.23
AC009495.3-201ENST00000425688 CHMP7Q8WUX9 453 aaPredicted RBP13.59□□□□□ -0.23
AC009495.3-201ENST00000425688 SNAPC4Q5SXM2 1469 aa13.58□□□□□ -0.24
AC009495.3-201ENST00000425688 ABCC8Q09428 1581 aa13.58□□□□□ -0.24
AC009495.3-201ENST00000425688 RNF39Q9H2S5 420 aa13.55□□□□□ -0.24
AC009495.3-201ENST00000425688 PRDM2Q13029 1718 aa13.55□□□□□ -0.24
AC009495.3-201ENST00000425688 KDM6BO15054 1643 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms