RNA–Protein interactions for RNA: ENST00000416529.5

RBM39-209, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-209ENST00000416529 RRP7AQ9Y3A4 280 aaKnown RBP9.9□□□□□ -0.82
RBM39-209ENST00000416529 KCPQ6ZWJ8 1503 aa9.9□□□□□ -0.82
RBM39-209ENST00000416529 NUP188Q5SRE5 1749 aa9.9□□□□□ -0.83
RBM39-209ENST00000416529 RREB1Q92766 1687 aa9.9□□□□□ -0.83
RBM39-209ENST00000416529 ZBTB7AO95365 584 aa9.89□□□□□ -0.83
RBM39-209ENST00000416529 ATP6V1AP38606 617 aa9.89□□□□□ -0.83
RBM39-209ENST00000416529 HNRNPUQ00839 825 aaKnown RBP eCLIP9.89□□□□□ -0.83
RBM39-209ENST00000416529 SLFN5Q08AF3 891 aa9.89□□□□□ -0.83
RBM39-209ENST00000416529 NPM2Q86SE8 214 aaKnown RBP9.89□□□□□ -0.83
RBM39-209ENST00000416529 SLC16A10Q8TF71 515 aa9.89□□□□□ -0.83
RBM39-209ENST00000416529 ZNF496Q96IT1 587 aaPredicted RBP9.89□□□□□ -0.83
RBM39-209ENST00000416529 QSER1Q2KHR3 1735 aa9.88□□□□□ -0.83
RBM39-209ENST00000416529 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.88□□□□□ -0.83
RBM39-209ENST00000416529 SSFA2P28290 1259 aa9.88□□□□□ -0.83
RBM39-209ENST00000416529 IL6STP40189 918 aaPredicted RBP9.88□□□□□ -0.83
RBM39-209ENST00000416529 BRPF1P55201 1214 aaPredicted RBP9.88□□□□□ -0.83
RBM39-209ENST00000416529 DCTN1Q14203 1278 aa9.88□□□□□ -0.83
RBM39-209ENST00000416529 HIC1Q14526 733 aa9.88□□□□□ -0.83
RBM39-209ENST00000416529 KMT5BQ4FZB7 885 aa9.88□□□□□ -0.83
RBM39-209ENST00000416529 CCDC30Q5VVM6 783 aa9.88□□□□□ -0.83
RBM39-209ENST00000416529 MBIPQ9NS73 344 aa9.88□□□□□ -0.83
RBM39-209ENST00000416529 TAF1LQ8IZX4 1826 aa9.88□□□□□ -0.83
RBM39-209ENST00000416529 RPS6KA4O75676 772 aa9.87□□□□□ -0.83
RBM39-209ENST00000416529 ALDH1L2Q3SY69 923 aa9.87□□□□□ -0.83
RBM39-209ENST00000416529 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.87□□□□□ -0.83
RBM39-209ENST00000416529 STK32BQ9NY57 414 aa9.87□□□□□ -0.83
RBM39-209ENST00000416529 DBF4Q9UBU7 674 aaPredicted RBP9.87□□□□□ -0.83
RBM39-209ENST00000416529 PCDHB3Q9Y5E6 796 aa9.87□□□□□ -0.83
RBM39-209ENST00000416529 FANCIQ9NVI1 1328 aa9.86□□□□□ -0.83
RBM39-209ENST00000416529 LAMB4A4D0S4 1761 aa9.86□□□□□ -0.83
RBM39-209ENST00000416529 TESPA1A2RU30 521 aaPredicted RBP9.86□□□□□ -0.83
RBM39-209ENST00000416529 CYP19A1P11511 503 aaPredicted RBP9.86□□□□□ -0.83
RBM39-209ENST00000416529 COL5A3P25940 1745 aaPredicted RBP9.86□□□□□ -0.83
RBM39-209ENST00000416529 PPP1R18Q6NYC8 613 aa9.86□□□□□ -0.83
RBM39-209ENST00000416529 TMUB1Q9BVT8 246 aa9.86□□□□□ -0.83
RBM39-209ENST00000416529 CCDC87Q9NVE4 849 aa9.86□□□□□ -0.83
RBM39-209ENST00000416529 HYPKQ9NX55 129 aa9.86□□□□□ -0.83
RBM39-209ENST00000416529 V9GY48 417 aaPredicted RBP9.86□□□□□ -0.83
RBM39-209ENST00000416529 IBTKQ9P2D0 1353 aaPredicted RBP9.86□□□□□ -0.83
RBM39-209ENST00000416529 RCCD1A6NED2 376 aa9.85□□□□□ -0.83
RBM39-209ENST00000416529 PTCD1O75127 700 aaKnown RBP9.85□□□□□ -0.83
RBM39-209ENST00000416529 C1QTNF8P60827 252 aa9.85□□□□□ -0.83
RBM39-209ENST00000416529 SLC39A6Q13433 755 aa9.85□□□□□ -0.83
RBM39-209ENST00000416529 SLC15A2Q16348 729 aa9.85□□□□□ -0.83
RBM39-209ENST00000416529 TWISTNBQ3B726 338 aaPredicted RBP9.85□□□□□ -0.83
RBM39-209ENST00000416529 DUSP27Q5VZP5 1158 aa9.85□□□□□ -0.83
RBM39-209ENST00000416529 CLEC4GQ6UXB4 293 aa9.85□□□□□ -0.83
RBM39-209ENST00000416529 AK7Q96M32 723 aa9.85□□□□□ -0.83
RBM39-209ENST00000416529 STK31Q9BXU1 1019 aa9.85□□□□□ -0.83
RBM39-209ENST00000416529 DDX21Q9NR30 783 aaKnown RBP eCLIP9.85□□□□□ -0.83
RBM39-209ENST00000416529 RTCBQ9Y3I0 505 aaKnown RBP9.85□□□□□ -0.83
RBM39-209ENST00000416529 ZPR1O75312 459 aa9.84□□□□□ -0.83
RBM39-209ENST00000416529 CRKLP46109 303 aaKnown RBP9.84□□□□□ -0.83
RBM39-209ENST00000416529 EIF5P55010 431 aaKnown RBP9.84□□□□□ -0.83
RBM39-209ENST00000416529 COPS2P61201 443 aa9.84□□□□□ -0.83
RBM39-209ENST00000416529 ZNF516Q92618 1163 aa9.84□□□□□ -0.83
RBM39-209ENST00000416529 THUMPD2Q9BTF0 503 aaKnown RBP9.84□□□□□ -0.83
RBM39-209ENST00000416529 C4BP0C0L5 1744 aa9.84□□□□□ -0.83
RBM39-209ENST00000416529 TJP1Q07157 1748 aa9.83□□□□□ -0.84
RBM39-209ENST00000416529 ERVV-1B6SEH8 477 aa9.83□□□□□ -0.84
RBM39-209ENST00000416529 VAMP4O75379 141 aa9.83□□□□□ -0.84
RBM39-209ENST00000416529 DDX58O95786 925 aaKnown RBP9.83□□□□□ -0.84
RBM39-209ENST00000416529 HSP90AB3PQ58FF7 597 aa9.83□□□□□ -0.84
RBM39-209ENST00000416529 TRAPPC3LQ5T215 181 aa9.83□□□□□ -0.84
RBM39-209ENST00000416529 HDGFL1Q5TGJ6 251 aa9.83□□□□□ -0.84
RBM39-209ENST00000416529 PTF1AQ7RTS3 328 aa9.83□□□□□ -0.84
RBM39-209ENST00000416529 DNAJC10Q8IXB1 793 aa9.83□□□□□ -0.84
RBM39-209ENST00000416529 SLC4A9Q96Q91 983 aa9.83□□□□□ -0.84
RBM39-209ENST00000416529 PRKD2Q9BZL6 878 aa9.83□□□□□ -0.84
RBM39-209ENST00000416529 PDGFDQ9GZP0 370 aaPredicted RBP9.83□□□□□ -0.84
RBM39-209ENST00000416529 LRRC4BQ9NT99 713 aa9.83□□□□□ -0.84
RBM39-209ENST00000416529 LAS1LQ9Y4W2 734 aaKnown RBP9.83□□□□□ -0.84
RBM39-209ENST00000416529 ITPK1Q13572 414 aa9.82□□□□□ -0.84
RBM39-209ENST00000416529 NLGN1Q8N2Q7 840 aa9.82□□□□□ -0.84
RBM39-209ENST00000416529 ARHGAP45Q92619 1136 aa9.82□□□□□ -0.84
RBM39-209ENST00000416529 FHDC1Q9C0D6 1143 aaPredicted RBP9.82□□□□□ -0.84
RBM39-209ENST00000416529 TFCP2L1Q9NZI6 479 aa9.82□□□□□ -0.84
RBM39-209ENST00000416529 ZNF652Q9Y2D9 606 aa9.82□□□□□ -0.84
RBM39-209ENST00000416529 PTPRCP08575 1304 aa9.82□□□□□ -0.84
RBM39-209ENST00000416529 RNF123Q5XPI4 1314 aa9.82□□□□□ -0.84
RBM39-209ENST00000416529 MYH14Q7Z406 1995 aaKnown RBP9.81□□□□□ -0.84
RBM39-209ENST00000416529 UBR3Q6ZT12 1888 aa9.81□□□□□ -0.84
RBM39-209ENST00000416529 IPO8O15397 1037 aaKnown RBP9.81□□□□□ -0.84
RBM39-209ENST00000416529 KCNQ3O43525 872 aa9.81□□□□□ -0.84
RBM39-209ENST00000416529 ACTN4O43707 911 aaKnown RBP9.81□□□□□ -0.84
RBM39-209ENST00000416529 MS4A1P11836 297 aa9.81□□□□□ -0.84
RBM39-209ENST00000416529 HSP90B1P14625 803 aaKnown RBP9.81□□□□□ -0.84
RBM39-209ENST00000416529 EXOSC9Q06265 439 aaKnown RBP9.81□□□□□ -0.84
RBM39-209ENST00000416529 INTS5Q6P9B9 1019 aaKnown RBP9.81□□□□□ -0.84
RBM39-209ENST00000416529 Q6ZNB5 142 aa9.81□□□□□ -0.84
RBM39-209ENST00000416529 LINC00116Q8NCU8 138 aa9.81□□□□□ -0.84
RBM39-209ENST00000416529 PXYLP1Q8TE99 480 aa9.81□□□□□ -0.84
RBM39-209ENST00000416529 MIS18AQ9NYP9 233 aa9.81□□□□□ -0.84
RBM39-209ENST00000416529 NARFQ9UHQ1 456 aa9.81□□□□□ -0.84
RBM39-209ENST00000416529 USP16Q9Y5T5 823 aa9.81□□□□□ -0.84
RBM39-209ENST00000416529 KIF16BQ96L93 1317 aa9.81□□□□□ -0.84
RBM39-209ENST00000416529 GNPATO15228 680 aa9.8□□□□□ -0.84
RBM39-209ENST00000416529 CFHP08603 1231 aa9.8□□□□□ -0.84
RBM39-209ENST00000416529 GPR162Q16538 588 aa9.8□□□□□ -0.84
RBM39-209ENST00000416529 C8orf58Q8NAV2 365 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms