RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 ZFATQ9P243 1243 aa7.07□□□□□ -1.28
HMGB3P23-201ENST00000414981 USP20Q9Y2K6 914 aa7.07□□□□□ -1.28
HMGB3P23-201ENST00000414981 CARNS1A5YM72 827 aa7.06□□□□□ -1.28
HMGB3P23-201ENST00000414981 NPR3P17342 541 aa7.06□□□□□ -1.28
HMGB3P23-201ENST00000414981 ARID4AP29374 1257 aaPredicted RBP7.06□□□□□ -1.28
HMGB3P23-201ENST00000414981 TRPM4Q8TD43 1214 aa7.06□□□□□ -1.28
HMGB3P23-201ENST00000414981 IGFLR1Q9H665 355 aa7.06□□□□□ -1.28
HMGB3P23-201ENST00000414981 DNAJB12Q9NXW2 375 aaKnown RBP7.06□□□□□ -1.28
HMGB3P23-201ENST00000414981 NOP53Q9NZM5 478 aaKnown RBP7.06□□□□□ -1.28
HMGB3P23-201ENST00000414981 FNDC3AQ9Y2H6 1198 aaKnown RBP7.06□□□□□ -1.28
HMGB3P23-201ENST00000414981 RARAP10276 462 aa7.05□□□□□ -1.28
HMGB3P23-201ENST00000414981 SCNN1AP37088 669 aa7.05□□□□□ -1.28
HMGB3P23-201ENST00000414981 DHX32Q7L7V1 743 aaKnown RBP7.05□□□□□ -1.28
HMGB3P23-201ENST00000414981 NLRP13Q86W25 1043 aa7.05□□□□□ -1.28
HMGB3P23-201ENST00000414981 DCAF5Q96JK2 942 aa7.05□□□□□ -1.28
HMGB3P23-201ENST00000414981 TLR7Q9NYK1 1049 aaKnown RBP7.05□□□□□ -1.28
HMGB3P23-201ENST00000414981 SLC6A14Q9UN76 642 aa7.05□□□□□ -1.28
HMGB3P23-201ENST00000414981 ZBTB42B2RXF5 422 aa7.04□□□□□ -1.28
HMGB3P23-201ENST00000414981 M0R082 166 aa7.04□□□□□ -1.28
HMGB3P23-201ENST00000414981 RPLP1P05386 114 aaKnown RBP7.04□□□□□ -1.28
HMGB3P23-201ENST00000414981 NRLP54845 237 aa7.04□□□□□ -1.28
HMGB3P23-201ENST00000414981 NOM1Q5C9Z4 860 aaKnown RBP7.04□□□□□ -1.28
HMGB3P23-201ENST00000414981 ALKBH2Q6NS38 261 aa7.04□□□□□ -1.28
HMGB3P23-201ENST00000414981 KRT25Q7Z3Z0 450 aa7.04□□□□□ -1.28
HMGB3P23-201ENST00000414981 ZNF417Q8TAU3 575 aa7.04□□□□□ -1.28
HMGB3P23-201ENST00000414981 ZNF587Q96SQ5 575 aaPredicted RBP7.04□□□□□ -1.28
HMGB3P23-201ENST00000414981 UBAP1LF5GYI3 381 aa7.03□□□□□ -1.28
HMGB3P23-201ENST00000414981 ALBP02768 609 aa7.03□□□□□ -1.28
HMGB3P23-201ENST00000414981 COL8A1P27658 744 aa7.03□□□□□ -1.28
HMGB3P23-201ENST00000414981 FKBP4Q02790 459 aaKnown RBP eCLIP7.03□□□□□ -1.28
HMGB3P23-201ENST00000414981 SF3B2Q13435 895 aaKnown RBP7.03□□□□□ -1.28
HMGB3P23-201ENST00000414981 COL9A3Q14050 684 aaPredicted RBP7.03□□□□□ -1.28
HMGB3P23-201ENST00000414981 GPR152Q8TDT2 470 aa7.03□□□□□ -1.28
HMGB3P23-201ENST00000414981 TTC9Q92623 222 aa7.03□□□□□ -1.28
HMGB3P23-201ENST00000414981 PLVAPQ9BX97 442 aa7.03□□□□□ -1.28
HMGB3P23-201ENST00000414981 SUV39H2Q9H5I1 410 aa7.03□□□□□ -1.28
HMGB3P23-201ENST00000414981 FRRS1LQ9P0K9 344 aa7.03□□□□□ -1.28
HMGB3P23-201ENST00000414981 SPDYE3A6NKU9 549 aa7.02□□□□□ -1.29
HMGB3P23-201ENST00000414981 LILRB5O75023 590 aa7.02□□□□□ -1.29
HMGB3P23-201ENST00000414981 FAM13AO94988 1023 aa7.02□□□□□ -1.29
HMGB3P23-201ENST00000414981 PSAPP07602 524 aa7.02□□□□□ -1.29
HMGB3P23-201ENST00000414981 HOXD8P13378 290 aaPredicted RBP7.02□□□□□ -1.29
HMGB3P23-201ENST00000414981 SOX18P35713 384 aa7.02□□□□□ -1.29
HMGB3P23-201ENST00000414981 GPLD1P80108 840 aa7.02□□□□□ -1.29
HMGB3P23-201ENST00000414981 TBC1D8BQ0IIM8 1120 aa7.02□□□□□ -1.29
HMGB3P23-201ENST00000414981 XKR5Q6UX68 686 aa7.02□□□□□ -1.29
HMGB3P23-201ENST00000414981 KCTD17Q8N5Z5 321 aa7.02□□□□□ -1.29
HMGB3P23-201ENST00000414981 RETREG2Q8NC44 543 aa7.02□□□□□ -1.29
HMGB3P23-201ENST00000414981 TRIM11Q96F44 468 aa7.02□□□□□ -1.29
HMGB3P23-201ENST00000414981 MMP20O60882 483 aa7.01□□□□□ -1.29
HMGB3P23-201ENST00000414981 IGHA1P01876 353 aa7.01□□□□□ -1.29
HMGB3P23-201ENST00000414981 EIF1AXP47813 144 aaKnown RBP7.01□□□□□ -1.29
HMGB3P23-201ENST00000414981 PLAURQ03405 335 aa7.01□□□□□ -1.29
HMGB3P23-201ENST00000414981 TRIP4Q15650 581 aaPredicted RBP7.01□□□□□ -1.29
HMGB3P23-201ENST00000414981 FAM35AQ86V20 835 aa7.01□□□□□ -1.29
HMGB3P23-201ENST00000414981 EGFL7Q9UHF1 273 aa7.01□□□□□ -1.29
HMGB3P23-201ENST00000414981 LOC102724428A0A0B4J2F2 783 aa7□□□□□ -1.29
HMGB3P23-201ENST00000414981 RGS9O75916 674 aaPredicted RBP7□□□□□ -1.29
HMGB3P23-201ENST00000414981 NID1P14543 1247 aa7□□□□□ -1.29
HMGB3P23-201ENST00000414981 PCSK2P16519 638 aa7□□□□□ -1.29
HMGB3P23-201ENST00000414981 MZF1P28698 734 aaPredicted RBP7□□□□□ -1.29
HMGB3P23-201ENST00000414981 SIK1P57059 783 aa7□□□□□ -1.29
HMGB3P23-201ENST00000414981 PDE12Q6L8Q7 609 aaKnown RBP7□□□□□ -1.29
HMGB3P23-201ENST00000414981 PSAPL1Q6NUJ1 521 aa7□□□□□ -1.29
HMGB3P23-201ENST00000414981 C8orf86Q6ZUL3 223 aa7□□□□□ -1.29
HMGB3P23-201ENST00000414981 ILDR2Q71H61 639 aa7□□□□□ -1.29
HMGB3P23-201ENST00000414981 NUDT16Q96DE0 195 aaKnown RBP7□□□□□ -1.29
HMGB3P23-201ENST00000414981 KRBA1A5PL33 1030 aa6.99□□□□□ -1.29
HMGB3P23-201ENST00000414981 MPSTP25325 297 aa6.99□□□□□ -1.29
HMGB3P23-201ENST00000414981 TTC39BQ5VTQ0 682 aaPredicted RBP6.99□□□□□ -1.29
HMGB3P23-201ENST00000414981 ELMSAN1Q6PJG2 1045 aa6.99□□□□□ -1.29
HMGB3P23-201ENST00000414981 ATCAYQ86WG3 371 aa6.99□□□□□ -1.29
HMGB3P23-201ENST00000414981 OR13H1Q8NG92 308 aa6.99□□□□□ -1.29
HMGB3P23-201ENST00000414981 NUDT8Q8WV74 236 aa6.99□□□□□ -1.29
HMGB3P23-201ENST00000414981 JPH1Q9HDC5 661 aaPredicted RBP6.99□□□□□ -1.29
HMGB3P23-201ENST00000414981 CPB1P15086 417 aa6.98□□□□□ -1.29
HMGB3P23-201ENST00000414981 AFF1P51825 1210 aaKnown RBP6.98□□□□□ -1.29
HMGB3P23-201ENST00000414981 TRIM28Q13263 835 aaKnown RBP6.98□□□□□ -1.29
HMGB3P23-201ENST00000414981 PLA2G4EQ3MJ16 856 aa6.98□□□□□ -1.29
HMGB3P23-201ENST00000414981 PERM1Q5SV97 790 aa6.98□□□□□ -1.29
HMGB3P23-201ENST00000414981 TXNDC2Q86VQ3 553 aa6.98□□□□□ -1.29
HMGB3P23-201ENST00000414981 TTC16Q8NEE8 873 aa6.98□□□□□ -1.29
HMGB3P23-201ENST00000414981 EDEM1Q92611 657 aa6.98□□□□□ -1.29
HMGB3P23-201ENST00000414981 LPIN3Q9BQK8 851 aa6.98□□□□□ -1.29
HMGB3P23-201ENST00000414981 NAGPAQ9UK23 515 aa6.98□□□□□ -1.29
HMGB3P23-201ENST00000414981 ICMTO60725 284 aa6.97□□□□□ -1.29
HMGB3P23-201ENST00000414981 ABL1P00519 1130 aa6.97□□□□□ -1.29
HMGB3P23-201ENST00000414981 PDGFAP04085 211 aa6.97□□□□□ -1.29
HMGB3P23-201ENST00000414981 SPATA31C1P0DKV0 1188 aa6.97□□□□□ -1.29
HMGB3P23-201ENST00000414981 USP5P45974 858 aa6.97□□□□□ -1.29
HMGB3P23-201ENST00000414981 DNM1Q05193 864 aaKnown RBP6.97□□□□□ -1.29
HMGB3P23-201ENST00000414981 MTMR3Q13615 1198 aa6.97□□□□□ -1.29
HMGB3P23-201ENST00000414981 PRRT3Q5FWE3 981 aa6.97□□□□□ -1.29
HMGB3P23-201ENST00000414981 GGNBP2Q9H3C7 697 aa6.97□□□□□ -1.29
HMGB3P23-201ENST00000414981 ELP3Q9H9T3 547 aa6.97□□□□□ -1.29
HMGB3P23-201ENST00000414981 ABI2Q9NYB9 513 aaPredicted RBP6.97□□□□□ -1.29
HMGB3P23-201ENST00000414981 J3QW42 95 aa6.96□□□□□ -1.3
HMGB3P23-201ENST00000414981 MLLT1Q03111 559 aaPredicted RBP6.96□□□□□ -1.3
HMGB3P23-201ENST00000414981 AAMPQ13685 434 aa6.96□□□□□ -1.3
HMGB3P23-201ENST00000414981 GRIK5Q16478 980 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms