RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 PRICKLE2Q7Z3G6 844 aa5.21□□□□□ -1.58
LINC01048-201ENST00000414480 FAM9BQ8IZU0 186 aa5.21□□□□□ -1.58
LINC01048-201ENST00000414480 PNMA1Q8ND90 353 aa5.21□□□□□ -1.58
LINC01048-201ENST00000414480 TRERF1Q96PN7 1200 aa5.21□□□□□ -1.58
LINC01048-201ENST00000414480 CHMP4BQ9H444 224 aaKnown RBP5.21□□□□□ -1.58
LINC01048-201ENST00000414480 NSFL1CQ9UNZ2 370 aaKnown RBP5.21□□□□□ -1.58
LINC01048-201ENST00000414480 LAS1LQ9Y4W2 734 aaKnown RBP5.21□□□□□ -1.58
LINC01048-201ENST00000414480 MST1RQ04912 1400 aa5.21□□□□□ -1.58
LINC01048-201ENST00000414480 CCNB3Q8WWL7 1395 aa5.2□□□□□ -1.58
LINC01048-201ENST00000414480 EFCAB6Q5THR3 1501 aa5.2□□□□□ -1.58
LINC01048-201ENST00000414480 RHOQP17081 205 aa5.2□□□□□ -1.58
LINC01048-201ENST00000414480 GPC1P35052 558 aa5.2□□□□□ -1.58
LINC01048-201ENST00000414480 C1QTNF8P60827 252 aa5.2□□□□□ -1.58
LINC01048-201ENST00000414480 PPP2R2DQ66LE6 453 aa5.2□□□□□ -1.58
LINC01048-201ENST00000414480 RIPOR1Q6ZS17 1223 aa5.2□□□□□ -1.58
LINC01048-201ENST00000414480 DZIP3Q86Y13 1208 aaKnown RBP5.2□□□□□ -1.58
LINC01048-201ENST00000414480 SEPT12Q8IYM1 358 aa5.2□□□□□ -1.58
LINC01048-201ENST00000414480 ACDQ96AP0 544 aa5.2□□□□□ -1.58
LINC01048-201ENST00000414480 GJD4Q96KN9 370 aaPredicted RBP5.2□□□□□ -1.58
LINC01048-201ENST00000414480 POLR3EQ9NVU0 708 aa5.2□□□□□ -1.58
LINC01048-201ENST00000414480 ESPNB1AK53 854 aa5.19□□□□□ -1.58
LINC01048-201ENST00000414480 ATF3P18847 181 aa5.19□□□□□ -1.58
LINC01048-201ENST00000414480 DBN1Q16643 649 aa5.19□□□□□ -1.58
LINC01048-201ENST00000414480 ALYREFQ86V81 257 aaKnown RBP5.19□□□□□ -1.58
LINC01048-201ENST00000414480 EXOC8Q8IYI6 725 aa5.19□□□□□ -1.58
LINC01048-201ENST00000414480 CCDC82Q8N4S0 544 aa5.19□□□□□ -1.58
LINC01048-201ENST00000414480 TBX22Q9Y458 520 aa5.19□□□□□ -1.58
LINC01048-201ENST00000414480 DYRK1BQ9Y463 629 aa5.19□□□□□ -1.58
LINC01048-201ENST00000414480 ZFYVE9O95405 1425 aa5.19□□□□□ -1.58
LINC01048-201ENST00000414480 DCCP43146 1447 aa5.19□□□□□ -1.58
LINC01048-201ENST00000414480 PTCH1Q13635 1447 aa5.19□□□□□ -1.58
LINC01048-201ENST00000414480 ADAMTS13Q76LX8 1427 aa5.19□□□□□ -1.58
LINC01048-201ENST00000414480 UNC13BO14795 1591 aa5.19□□□□□ -1.58
LINC01048-201ENST00000414480 CCDC141Q6ZP82 1450 aa5.19□□□□□ -1.58
LINC01048-201ENST00000414480 PLEKHG1Q9ULL1 1385 aa5.18□□□□□ -1.58
LINC01048-201ENST00000414480 GLI3P10071 1580 aa5.18□□□□□ -1.58
LINC01048-201ENST00000414480 EEA1Q15075 1411 aa5.18□□□□□ -1.58
LINC01048-201ENST00000414480 ATP5J2-PTCD1G3V325 749 aa5.18□□□□□ -1.58
LINC01048-201ENST00000414480 OIP5O43482 229 aa5.18□□□□□ -1.58
LINC01048-201ENST00000414480 MX2P20592 715 aa5.18□□□□□ -1.58
LINC01048-201ENST00000414480 R3HDM1Q15032 1099 aaKnown RBP5.18□□□□□ -1.58
LINC01048-201ENST00000414480 FAM43BQ6ZT52 329 aaPredicted RBP5.18□□□□□ -1.58
LINC01048-201ENST00000414480 GTPBP3Q969Y2 492 aaKnown RBP5.18□□□□□ -1.58
LINC01048-201ENST00000414480 CYLDQ9NQC7 956 aa5.18□□□□□ -1.58
LINC01048-201ENST00000414480 CFAP65Q6ZU64 1925 aaKnown RBP5.18□□□□□ -1.58
LINC01048-201ENST00000414480 CEP152O94986 1710 aa5.17□□□□□ -1.58
LINC01048-201ENST00000414480 PTPRUQ92729 1446 aa5.17□□□□□ -1.58
LINC01048-201ENST00000414480 LAMC1P11047 1609 aa5.17□□□□□ -1.58
LINC01048-201ENST00000414480 CLGNO14967 610 aa5.17□□□□□ -1.58
LINC01048-201ENST00000414480 BAG6P46379 1132 aa5.17□□□□□ -1.58
LINC01048-201ENST00000414480 MAP2K3P46734 347 aa5.17□□□□□ -1.58
LINC01048-201ENST00000414480 KRTAP4-8Q9BYQ9 185 aa5.17□□□□□ -1.58
LINC01048-201ENST00000414480 MYOM2P54296 1465 aa5.17□□□□□ -1.58
LINC01048-201ENST00000414480 RALGAPBQ86X10 1494 aa5.17□□□□□ -1.58
LINC01048-201ENST00000414480 MTUS2Q5JR59 1369 aa5.16□□□□□ -1.58
LINC01048-201ENST00000414480 NOS1P29475 1434 aa5.16□□□□□ -1.58
LINC01048-201ENST00000414480 MEN1O00255 615 aa5.16□□□□□ -1.58
LINC01048-201ENST00000414480 Q8N3U1 123 aa5.16□□□□□ -1.58
LINC01048-201ENST00000414480 GAS2L1Q99501 681 aaPredicted RBP5.16□□□□□ -1.58
LINC01048-201ENST00000414480 MYH16Q9H6N6 1097 aa5.16□□□□□ -1.58
LINC01048-201ENST00000414480 MKL2Q9ULH7 1088 aa5.16□□□□□ -1.58
LINC01048-201ENST00000414480 SPHKAPQ2M3C7 1700 aa5.16□□□□□ -1.58
LINC01048-201ENST00000414480 ADGRB3O60242 1522 aa5.16□□□□□ -1.58
LINC01048-201ENST00000414480 CEP350Q5VT06 3117 aa5.16□□□□□ -1.58
LINC01048-201ENST00000414480 BRWD3Q6RI45 1802 aa5.16□□□□□ -1.58
LINC01048-201ENST00000414480 UTRNP46939 3433 aa5.16□□□□□ -1.58
LINC01048-201ENST00000414480 PIK3R4Q99570 1358 aa5.16□□□□□ -1.58
LINC01048-201ENST00000414480 EIF2AK4Q9P2K8 1649 aaKnown RBP5.15□□□□□ -1.58
LINC01048-201ENST00000414480 DISP2A7MBM2 1401 aa5.15□□□□□ -1.58
LINC01048-201ENST00000414480 FYCO1Q9BQS8 1478 aa5.15□□□□□ -1.58
LINC01048-201ENST00000414480 SLIT2O94813 1529 aa5.15□□□□□ -1.58
LINC01048-201ENST00000414480 APPP05067 770 aa5.15□□□□□ -1.59
LINC01048-201ENST00000414480 SF3B2Q13435 895 aaKnown RBP5.15□□□□□ -1.59
LINC01048-201ENST00000414480 ANKRD13AQ8IZ07 590 aa5.15□□□□□ -1.59
LINC01048-201ENST00000414480 ANP32BQ92688 251 aaKnown RBP5.15□□□□□ -1.59
LINC01048-201ENST00000414480 ZNF622Q969S3 477 aaKnown RBP eCLIP5.15□□□□□ -1.59
LINC01048-201ENST00000414480 TRAIPQ9BWF2 469 aa5.15□□□□□ -1.59
LINC01048-201ENST00000414480 OXCT2Q9BYC2 517 aaPredicted RBP5.15□□□□□ -1.59
LINC01048-201ENST00000414480 COL22A1Q8NFW1 1626 aaPredicted RBP5.15□□□□□ -1.59
LINC01048-201ENST00000414480 TRPM2O94759 1503 aa5.14□□□□□ -1.59
LINC01048-201ENST00000414480 ARHGEF5Q12774 1597 aa5.14□□□□□ -1.59
LINC01048-201ENST00000414480 KRBA1A5PL33 1030 aa5.14□□□□□ -1.59
LINC01048-201ENST00000414480 SMARCA5O60264 1052 aaPredicted RBP5.14□□□□□ -1.59
LINC01048-201ENST00000414480 AP1G2O75843 785 aa5.14□□□□□ -1.59
LINC01048-201ENST00000414480 SNRPNP63162 240 aaKnown RBP5.14□□□□□ -1.59
LINC01048-201ENST00000414480 POU4F2Q12837 409 aa5.14□□□□□ -1.59
LINC01048-201ENST00000414480 SKIV2LQ15477 1246 aaKnown RBP5.14□□□□□ -1.59
LINC01048-201ENST00000414480 WDR44Q5JSH3 913 aa5.14□□□□□ -1.59
LINC01048-201ENST00000414480 SLC27A3Q5K4L6 730 aa5.14□□□□□ -1.59
LINC01048-201ENST00000414480 UNC5CLQ8IV45 518 aa5.14□□□□□ -1.59
LINC01048-201ENST00000414480 NLRP3Q96P20 1036 aa5.14□□□□□ -1.59
LINC01048-201ENST00000414480 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.14□□□□□ -1.59
LINC01048-201ENST00000414480 NUCKS1Q9H1E3 243 aaKnown RBP5.14□□□□□ -1.59
LINC01048-201ENST00000414480 SLC24A3Q9HC58 644 aa5.14□□□□□ -1.59
LINC01048-201ENST00000414480 AMOTL2Q9Y2J4 779 aa5.14□□□□□ -1.59
LINC01048-201ENST00000414480 NINLQ9Y2I6 1382 aa5.14□□□□□ -1.59
LINC01048-201ENST00000414480 C1orf167Q5SNV9 1468 aa5.13□□□□□ -1.59
LINC01048-201ENST00000414480 CAMTA1Q9Y6Y1 1673 aa5.13□□□□□ -1.59
LINC01048-201ENST00000414480 A0A1W2PRU2 124 aa5.13□□□□□ -1.59
LINC01048-201ENST00000414480 SPATA31C2B4DYI2 1134 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms