RNA–Protein interactions for RNA: ENST00000407595.2

CCDC85A-201, Transcript of coiled-coil domain containing 85A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC85A, Length 3,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85A-201ENST00000407595 ADAMTS13Q76LX8 1427 aa18.46■□□□□ 0.55
CCDC85A-201ENST00000407595 LMTK3Q96Q04 1460 aa18.46■□□□□ 0.55
CCDC85A-201ENST00000407595 ERICH4A6NGS2 130 aa18.46■□□□□ 0.55
CCDC85A-201ENST00000407595 CHST3Q7LGC8 479 aa18.46■□□□□ 0.55
CCDC85A-201ENST00000407595 RAI14Q9P0K7 980 aa18.46■□□□□ 0.55
CCDC85A-201ENST00000407595 NCBP3Q53F19 620 aaKnown RBP18.45■□□□□ 0.54
CCDC85A-201ENST00000407595 UNC5CLQ8IV45 518 aa18.45■□□□□ 0.54
CCDC85A-201ENST00000407595 MYRIPQ8NFW9 859 aa18.45■□□□□ 0.54
CCDC85A-201ENST00000407595 DBNDD2Q9BQY9 259 aa18.45■□□□□ 0.54
CCDC85A-201ENST00000407595 PTGS1P23219 599 aa18.44■□□□□ 0.54
CCDC85A-201ENST00000407595 CCDC129Q6ZRS4 1044 aa18.44■□□□□ 0.54
CCDC85A-201ENST00000407595 EVI5LQ96CN4 794 aa18.44■□□□□ 0.54
CCDC85A-201ENST00000407595 INTS4Q96HW7 963 aaKnown RBP18.44■□□□□ 0.54
CCDC85A-201ENST00000407595 CGNQ9P2M7 1197 aaKnown RBP18.44■□□□□ 0.54
CCDC85A-201ENST00000407595 DHX16O60231 1041 aaKnown RBP18.44■□□□□ 0.54
CCDC85A-201ENST00000407595 KINO60870 393 aaKnown RBP18.44■□□□□ 0.54
CCDC85A-201ENST00000407595 F13A1P00488 732 aa18.44■□□□□ 0.54
CCDC85A-201ENST00000407595 ANAPC15P60006 121 aa18.44■□□□□ 0.54
CCDC85A-201ENST00000407595 ASAP1Q9ULH1 1129 aa18.44■□□□□ 0.54
CCDC85A-201ENST00000407595 NMIQ13287 307 aaPredicted RBP18.44■□□□□ 0.54
CCDC85A-201ENST00000407595 ZSCAN31Q96LW9 406 aaPredicted RBP18.44■□□□□ 0.54
CCDC85A-201ENST00000407595 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.44■□□□□ 0.54
CCDC85A-201ENST00000407595 V9GYY5 206 aaPredicted RBP18.44■□□□□ 0.54
CCDC85A-201ENST00000407595 PNPLA6Q8IY17 1366 aa18.43■□□□□ 0.54
CCDC85A-201ENST00000407595 FAM227BQ96M60 508 aa18.43■□□□□ 0.54
CCDC85A-201ENST00000407595 JAG2Q9Y219 1238 aa18.43■□□□□ 0.54
CCDC85A-201ENST00000407595 SMC2O95347 1197 aa18.43■□□□□ 0.54
CCDC85A-201ENST00000407595 IGHMBP2P38935 993 aaKnown RBP18.43■□□□□ 0.54
CCDC85A-201ENST00000407595 PTPRUQ92729 1446 aa18.43■□□□□ 0.54
CCDC85A-201ENST00000407595 NUP133Q8WUM0 1156 aa18.43■□□□□ 0.54
CCDC85A-201ENST00000407595 CLIP2Q9UDT6 1046 aa18.43■□□□□ 0.54
CCDC85A-201ENST00000407595 RBM8AQ9Y5S9 174 aaKnown RBP18.43■□□□□ 0.54
CCDC85A-201ENST00000407595 ANKRD18BA2A2Z9 1011 aa18.42■□□□□ 0.54
CCDC85A-201ENST00000407595 LUZP1Q86V48 1076 aa18.42■□□□□ 0.54
CCDC85A-201ENST00000407595 DIP2BQ9P265 1576 aa18.42■□□□□ 0.54
CCDC85A-201ENST00000407595 MINDY4BA8MYZ0 360 aa18.42■□□□□ 0.54
CCDC85A-201ENST00000407595 ZNF165P49910 485 aa18.42■□□□□ 0.54
CCDC85A-201ENST00000407595 GCKRQ14397 625 aa18.42■□□□□ 0.54
CCDC85A-201ENST00000407595 FAM98CQ17RN3 349 aaKnown RBP18.42■□□□□ 0.54
CCDC85A-201ENST00000407595 ZNF219Q9P2Y4 722 aaPredicted RBP18.42■□□□□ 0.54
CCDC85A-201ENST00000407595 WWC3Q9ULE0 1092 aa18.42■□□□□ 0.54
CCDC85A-201ENST00000407595 MROH1Q8NDA8 1641 aa18.42■□□□□ 0.54
CCDC85A-201ENST00000407595 CDK12Q9NYV4 1490 aaPredicted RBP18.42■□□□□ 0.54
CCDC85A-201ENST00000407595 BEND3Q5T5X7 828 aa18.42■□□□□ 0.54
CCDC85A-201ENST00000407595 DZIP3Q86Y13 1208 aaKnown RBP18.42■□□□□ 0.54
CCDC85A-201ENST00000407595 ZDHHC9Q9Y397 364 aa18.42■□□□□ 0.54
CCDC85A-201ENST00000407595 CPSF1Q10570 1443 aaKnown RBP18.42■□□□□ 0.54
CCDC85A-201ENST00000407595 U2AF2P26368 475 aaKnown RBP eCLIP18.41■□□□□ 0.54
CCDC85A-201ENST00000407595 SMAP1Q8IYB5 467 aaPredicted RBP18.41■□□□□ 0.54
CCDC85A-201ENST00000407595 DACT1Q9NYF0 836 aa18.41■□□□□ 0.54
CCDC85A-201ENST00000407595 ME1P48163 572 aa18.41■□□□□ 0.54
CCDC85A-201ENST00000407595 TDO2P48775 406 aa18.41■□□□□ 0.54
CCDC85A-201ENST00000407595 CCDC144CPQ8IYA2 1237 aa18.41■□□□□ 0.54
CCDC85A-201ENST00000407595 METTL22Q9BUU2 404 aaPredicted RBP18.41■□□□□ 0.54
CCDC85A-201ENST00000407595 SETBP1Q9Y6X0 1596 aa18.41■□□□□ 0.54
CCDC85A-201ENST00000407595 RIOK3O14730 519 aaKnown RBP18.41■□□□□ 0.54
CCDC85A-201ENST00000407595 DDIT3P35638 169 aa18.41■□□□□ 0.54
CCDC85A-201ENST00000407595 BRINP3Q76B58 766 aa18.41■□□□□ 0.54
CCDC85A-201ENST00000407595 PPP1R1BQ9UD71 204 aaPredicted RBP18.41■□□□□ 0.54
CCDC85A-201ENST00000407595 NIP7Q9Y221 180 aaKnown RBP eCLIP18.41■□□□□ 0.54
CCDC85A-201ENST00000407595 PCDH11XQ9BZA7 1347 aa18.41■□□□□ 0.54
CCDC85A-201ENST00000407595 PCDH11YQ9BZA8 1340 aa18.41■□□□□ 0.54
CCDC85A-201ENST00000407595 LRRC7Q96NW7 1537 aa18.41■□□□□ 0.54
CCDC85A-201ENST00000407595 ERICH2A1L162 156 aa18.4■□□□□ 0.54
CCDC85A-201ENST00000407595 TRIM29Q14134 588 aa18.4■□□□□ 0.54
CCDC85A-201ENST00000407595 AIDAQ96BJ3 306 aa18.4■□□□□ 0.54
CCDC85A-201ENST00000407595 IBTKQ9P2D0 1353 aaPredicted RBP18.4■□□□□ 0.54
CCDC85A-201ENST00000407595 CYP27B1O15528 508 aa18.4■□□□□ 0.54
CCDC85A-201ENST00000407595 ANO6Q4KMQ2 910 aa18.4■□□□□ 0.54
CCDC85A-201ENST00000407595 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.4■□□□□ 0.54
CCDC85A-201ENST00000407595 FAM177A1Q8N128 213 aaPredicted RBP18.4■□□□□ 0.54
CCDC85A-201ENST00000407595 ZPR1O75312 459 aa18.4■□□□□ 0.54
CCDC85A-201ENST00000407595 MNS1Q8NEH6 495 aa18.4■□□□□ 0.54
CCDC85A-201ENST00000407595 TOM1O60784 492 aa18.39■□□□□ 0.53
CCDC85A-201ENST00000407595 PTPN14Q15678 1187 aa18.39■□□□□ 0.53
CCDC85A-201ENST00000407595 IQGAP1P46940 1657 aa18.39■□□□□ 0.53
CCDC85A-201ENST00000407595 TRERF1Q96PN7 1200 aa18.39■□□□□ 0.53
CCDC85A-201ENST00000407595 EAF2Q96CJ1 260 aaPredicted RBP18.39■□□□□ 0.53
CCDC85A-201ENST00000407595 VWDEQ8N2E2 1590 aa18.38■□□□□ 0.53
CCDC85A-201ENST00000407595 NOL10Q9BSC4 688 aaKnown RBP18.38■□□□□ 0.53
CCDC85A-201ENST00000407595 NRXN1Q9ULB1 1477 aa18.38■□□□□ 0.53
CCDC85A-201ENST00000407595 NEURL1BA8MQ27 555 aa18.38■□□□□ 0.53
CCDC85A-201ENST00000407595 FAM200AQ8TCP9 573 aa18.38■□□□□ 0.53
CCDC85A-201ENST00000407595 BCL2L12Q9HB09 334 aa18.38■□□□□ 0.53
CCDC85A-201ENST00000407595 BRF1Q92994 677 aa18.38■□□□□ 0.53
CCDC85A-201ENST00000407595 SCAND2PQ9GZW5 306 aaPredicted RBP18.38■□□□□ 0.53
CCDC85A-201ENST00000407595 SH2B1Q9NRF2 756 aaPredicted RBP18.38■□□□□ 0.53
CCDC85A-201ENST00000407595 DNAJC25Q9H1X3 360 aa18.37■□□□□ 0.53
CCDC85A-201ENST00000407595 IRS4O14654 1257 aaPredicted RBP18.37■□□□□ 0.53
CCDC85A-201ENST00000407595 DNAJC5Q9H3Z4 198 aa18.37■□□□□ 0.53
CCDC85A-201ENST00000407595 ATP2B3Q16720 1220 aa18.37■□□□□ 0.53
CCDC85A-201ENST00000407595 PDLIM2Q96JY6 352 aa18.37■□□□□ 0.53
CCDC85A-201ENST00000407595 AKAP2Q9Y2D5 859 aa18.37■□□□□ 0.53
CCDC85A-201ENST00000407595 TYRO3Q06418 890 aa18.36■□□□□ 0.53
CCDC85A-201ENST00000407595 TLR7Q9NYK1 1049 aaKnown RBP18.36■□□□□ 0.53
CCDC85A-201ENST00000407595 MYO3AQ8NEV4 1616 aa18.36■□□□□ 0.53
CCDC85A-201ENST00000407595 ANKRD1Q15327 319 aa18.35■□□□□ 0.53
CCDC85A-201ENST00000407595 VPS53Q5VIR6 699 aa18.35■□□□□ 0.53
CCDC85A-201ENST00000407595 PLBD2Q8NHP8 589 aa18.35■□□□□ 0.53
CCDC85A-201ENST00000407595 SSH3Q8TE77 659 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms