RNA–Protein interactions for RNA: ENST00000399026.1

BRCC3-205, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 456 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-205ENST00000399026 TM4SF1P30408 202 aa10.78□□□□□ -0.68
BRCC3-205ENST00000399026 HNRNPUQ00839 825 aaKnown RBP eCLIP10.78□□□□□ -0.68
BRCC3-205ENST00000399026 CCDC24Q8N4L8 307 aa10.78□□□□□ -0.68
BRCC3-205ENST00000399026 CDCA7LQ96GN5 454 aa10.78□□□□□ -0.68
BRCC3-205ENST00000399026 MYH16Q9H6N6 1097 aa10.78□□□□□ -0.68
BRCC3-205ENST00000399026 DDX21Q9NR30 783 aaKnown RBP eCLIP10.78□□□□□ -0.68
BRCC3-205ENST00000399026 ZNF652Q9Y2D9 606 aa10.78□□□□□ -0.68
BRCC3-205ENST00000399026 FAM177BA6PVY3 158 aa10.77□□□□□ -0.69
BRCC3-205ENST00000399026 SERPINB2P05120 415 aa10.77□□□□□ -0.69
BRCC3-205ENST00000399026 GPTP24298 496 aa10.77□□□□□ -0.69
BRCC3-205ENST00000399026 COPS6Q7L5N1 327 aa10.77□□□□□ -0.69
BRCC3-205ENST00000399026 PTCD2Q8WV60 388 aaKnown RBP10.77□□□□□ -0.69
BRCC3-205ENST00000399026 ZNF428Q96B54 188 aa10.77□□□□□ -0.69
BRCC3-205ENST00000399026 PHAXQ9H814 394 aaKnown RBP10.77□□□□□ -0.69
BRCC3-205ENST00000399026 DBF4Q9UBU7 674 aaPredicted RBP10.77□□□□□ -0.69
BRCC3-205ENST00000399026 NIP7Q9Y221 180 aaKnown RBP eCLIP10.77□□□□□ -0.69
BRCC3-205ENST00000399026 UBN2Q6ZU65 1347 aa10.77□□□□□ -0.69
BRCC3-205ENST00000399026 LAMB2P55268 1798 aa10.76□□□□□ -0.69
BRCC3-205ENST00000399026 SETDB2Q96T68 719 aa10.76□□□□□ -0.69
BRCC3-205ENST00000399026 CRISPLD2Q9H0B8 497 aa10.76□□□□□ -0.69
BRCC3-205ENST00000399026 CD2APQ9Y5K6 639 aa10.76□□□□□ -0.69
BRCC3-205ENST00000399026 ABCC12Q96J65 1359 aa10.76□□□□□ -0.69
BRCC3-205ENST00000399026 E9PSI1 815 aa10.75□□□□□ -0.69
BRCC3-205ENST00000399026 NPHP1O15259 732 aa10.75□□□□□ -0.69
BRCC3-205ENST00000399026 CCDC30Q5VVM6 783 aa10.75□□□□□ -0.69
BRCC3-205ENST00000399026 PRR5LQ6MZQ0 368 aa10.75□□□□□ -0.69
BRCC3-205ENST00000399026 CNBD1Q8NA66 436 aa10.75□□□□□ -0.69
BRCC3-205ENST00000399026 STK31Q9BXU1 1019 aa10.75□□□□□ -0.69
BRCC3-205ENST00000399026 LHX6Q9UPM6 363 aa10.75□□□□□ -0.69
BRCC3-205ENST00000399026 GOLGB1Q14789 3259 aaKnown RBP10.75□□□□□ -0.69
BRCC3-205ENST00000399026 DDX60Q8IY21 1712 aaKnown RBP10.75□□□□□ -0.69
BRCC3-205ENST00000399026 CACNA1FO60840 1977 aa10.74□□□□□ -0.69
BRCC3-205ENST00000399026 ERVV-1B6SEH8 477 aa10.74□□□□□ -0.69
BRCC3-205ENST00000399026 CHRNA5P30532 468 aa10.74□□□□□ -0.69
BRCC3-205ENST00000399026 SLFN5Q08AF3 891 aa10.74□□□□□ -0.69
BRCC3-205ENST00000399026 CLEC4GQ6UXB4 293 aa10.74□□□□□ -0.69
BRCC3-205ENST00000399026 GIGYF2Q6Y7W6 1299 aaKnown RBP10.74□□□□□ -0.69
BRCC3-205ENST00000399026 NBPF5PQ86XG9 351 aaPredicted RBP10.74□□□□□ -0.69
BRCC3-205ENST00000399026 HYPKQ9NX55 129 aa10.74□□□□□ -0.69
BRCC3-205ENST00000399026 ARFGEF1Q9Y6D6 1849 aa10.74□□□□□ -0.69
BRCC3-205ENST00000399026 A0A0G2JLW4 131 aa10.73□□□□□ -0.69
BRCC3-205ENST00000399026 VAMP4O75379 141 aa10.73□□□□□ -0.69
BRCC3-205ENST00000399026 DPEP1P16444 411 aa10.73□□□□□ -0.69
BRCC3-205ENST00000399026 ST5P78524 1137 aa10.73□□□□□ -0.69
BRCC3-205ENST00000399026 G2E3Q7L622 706 aa10.73□□□□□ -0.69
BRCC3-205ENST00000399026 NUTM1Q86Y26 1132 aa10.73□□□□□ -0.69
BRCC3-205ENST00000399026 ADCY9O60503 1353 aa10.73□□□□□ -0.69
BRCC3-205ENST00000399026 YBX3P16989 372 aaKnown RBP eCLIP10.72□□□□□ -0.69
BRCC3-205ENST00000399026 ZNF34Q8IZ26 560 aa10.72□□□□□ -0.69
BRCC3-205ENST00000399026 PLBD2Q8NHP8 589 aa10.72□□□□□ -0.69
BRCC3-205ENST00000399026 IBTKQ9P2D0 1353 aaPredicted RBP10.72□□□□□ -0.69
BRCC3-205ENST00000399026 ATP5J2-PTCD1G3V325 749 aa10.71□□□□□ -0.69
BRCC3-205ENST00000399026 NTSR2O95665 410 aa10.71□□□□□ -0.69
BRCC3-205ENST00000399026 GPR162Q16538 588 aa10.71□□□□□ -0.69
BRCC3-205ENST00000399026 SUSD4Q5VX71 490 aa10.71□□□□□ -0.69
BRCC3-205ENST00000399026 ZBED9Q6R2W3 1325 aa10.71□□□□□ -0.69
BRCC3-205ENST00000399026 ANKRD13DQ6ZTN6 518 aa10.71□□□□□ -0.69
BRCC3-205ENST00000399026 RIC3Q7Z5B4 369 aa10.71□□□□□ -0.69
BRCC3-205ENST00000399026 MYD88Q99836 296 aa10.71□□□□□ -0.69
BRCC3-205ENST00000399026 UTRNP46939 3433 aa10.71□□□□□ -0.7
BRCC3-205ENST00000399026 PDE4AP27815 886 aa10.7□□□□□ -0.7
BRCC3-205ENST00000399026 TGFB2P61812 414 aa10.7□□□□□ -0.7
BRCC3-205ENST00000399026 FLIIQ13045 1269 aa10.7□□□□□ -0.7
BRCC3-205ENST00000399026 TCIRG1Q13488 830 aa10.7□□□□□ -0.7
BRCC3-205ENST00000399026 ERFEQ4G0M1 354 aa10.7□□□□□ -0.7
BRCC3-205ENST00000399026 HSP90AB3PQ58FF7 597 aa10.7□□□□□ -0.7
BRCC3-205ENST00000399026 C2CD5Q86YS7 1000 aa10.7□□□□□ -0.7
BRCC3-205ENST00000399026 BCL2L13Q9BXK5 485 aa10.7□□□□□ -0.7
BRCC3-205ENST00000399026 RTN4Q9NQC3 1192 aaKnown RBP10.7□□□□□ -0.7
BRCC3-205ENST00000399026 MAP3K2Q9Y2U5 619 aa10.7□□□□□ -0.7
BRCC3-205ENST00000399026 RIC1Q4ADV7 1423 aa10.69□□□□□ -0.7
BRCC3-205ENST00000399026 DDX58O95786 925 aaKnown RBP10.69□□□□□ -0.7
BRCC3-205ENST00000399026 KCNA3P22001 575 aa10.69□□□□□ -0.7
BRCC3-205ENST00000399026 GTF2E1P29083 439 aaPredicted RBP10.69□□□□□ -0.7
BRCC3-205ENST00000399026 FKBP5Q13451 457 aaPredicted RBP10.69□□□□□ -0.7
BRCC3-205ENST00000399026 NLRP10Q86W26 655 aa10.69□□□□□ -0.7
BRCC3-205ENST00000399026 TRMT2AQ8IZ69 625 aaKnown RBP10.69□□□□□ -0.7
BRCC3-205ENST00000399026 CHMP4AQ9BY43 222 aa10.69□□□□□ -0.7
BRCC3-205ENST00000399026 NYXQ9GZU5 481 aa10.69□□□□□ -0.7
BRCC3-205ENST00000399026 BCS1LQ9Y276 419 aa10.69□□□□□ -0.7
BRCC3-205ENST00000399026 CHD4Q14839 1912 aa10.68□□□□□ -0.7
BRCC3-205ENST00000399026 SLX4Q8IY92 1834 aa10.68□□□□□ -0.7
BRCC3-205ENST00000399026 PI4KAP2A4QPH2 592 aa10.68□□□□□ -0.7
BRCC3-205ENST00000399026 PARP10Q53GL7 1025 aa10.68□□□□□ -0.7
BRCC3-205ENST00000399026 PPP1R15BQ5SWA1 713 aa10.68□□□□□ -0.7
BRCC3-205ENST00000399026 TPTE2Q6XPS3 522 aa10.68□□□□□ -0.7
BRCC3-205ENST00000399026 PPP1R42Q7Z4L9 355 aa10.68□□□□□ -0.7
BRCC3-205ENST00000399026 SYNE4Q8N205 404 aa10.68□□□□□ -0.7
BRCC3-205ENST00000399026 PI4KAP1Q8N8J0 262 aa10.68□□□□□ -0.7
BRCC3-205ENST00000399026 ISCA1Q9BUE6 129 aa10.68□□□□□ -0.7
BRCC3-205ENST00000399026 UTP14AQ9BVJ6 771 aaKnown RBP10.68□□□□□ -0.7
BRCC3-205ENST00000399026 BRIP1Q9BX63 1249 aa10.68□□□□□ -0.7
BRCC3-205ENST00000399026 COL4A1P02462 1669 aa10.68□□□□□ -0.7
BRCC3-205ENST00000399026 SPEF2Q9C093 1822 aa10.68□□□□□ -0.7
BRCC3-205ENST00000399026 MYH3P11055 1940 aa10.67□□□□□ -0.7
BRCC3-205ENST00000399026 F6X3S4 739 aa10.67□□□□□ -0.7
BRCC3-205ENST00000399026 H0YIN7 160 aa10.67□□□□□ -0.7
BRCC3-205ENST00000399026 TBC1D12O60347 775 aa10.67□□□□□ -0.7
BRCC3-205ENST00000399026 PDE6BP35913 854 aa10.67□□□□□ -0.7
BRCC3-205ENST00000399026 RTL5Q5HYW3 569 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms