RNA–Protein interactions for RNA: ENST00000393758.6

PDZD4-202, Transcript of PDZ domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDZD4, Length 3,763 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-202ENST00000393758 CCDC69A6NI79 296 aa18.86■□□□□ 0.61
PDZD4-202ENST00000393758 APPP05067 770 aa18.86■□□□□ 0.61
PDZD4-202ENST00000393758 HAND2P61296 217 aa18.86■□□□□ 0.61
PDZD4-202ENST00000393758 KSR2Q6VAB6 950 aa18.86■□□□□ 0.61
PDZD4-202ENST00000393758 TMEM87AQ8NBN3 555 aa18.86■□□□□ 0.61
PDZD4-202ENST00000393758 TOMM22Q9NS69 142 aa18.86■□□□□ 0.61
PDZD4-202ENST00000393758 PLEKHG3A1L390 1219 aa18.86■□□□□ 0.61
PDZD4-202ENST00000393758 GOLIM4O00461 696 aa18.86■□□□□ 0.61
PDZD4-202ENST00000393758 LTKP29376 864 aa18.86■□□□□ 0.61
PDZD4-202ENST00000393758 APOBRQ0VD83 1088 aa18.86■□□□□ 0.61
PDZD4-202ENST00000393758 KIF18AQ8NI77 898 aa18.86■□□□□ 0.61
PDZD4-202ENST00000393758 ZC3H6P61129 1189 aaKnown RBP18.85■□□□□ 0.61
PDZD4-202ENST00000393758 TMC6Q7Z403 805 aa18.85■□□□□ 0.61
PDZD4-202ENST00000393758 CACTINQ8WUQ7 758 aaKnown RBP18.85■□□□□ 0.61
PDZD4-202ENST00000393758 PIK3C2BO00750 1634 aa18.85■□□□□ 0.61
PDZD4-202ENST00000393758 TTC21AQ8NDW8 1320 aa18.85■□□□□ 0.61
PDZD4-202ENST00000393758 HSP90AA4PQ58FG1 418 aa18.85■□□□□ 0.61
PDZD4-202ENST00000393758 NBPF6Q5VWK0 638 aa18.85■□□□□ 0.61
PDZD4-202ENST00000393758 NBPF4Q96M43 638 aa18.85■□□□□ 0.61
PDZD4-202ENST00000393758 CLSTN2Q9H4D0 955 aa18.85■□□□□ 0.61
PDZD4-202ENST00000393758 SMTNL1A8MU46 457 aa18.85■□□□□ 0.61
PDZD4-202ENST00000393758 NEURL4Q96JN8 1562 aa18.84■□□□□ 0.61
PDZD4-202ENST00000393758 ATP2B1P20020 1258 aa18.84■□□□□ 0.61
PDZD4-202ENST00000393758 STX1AQ16623 288 aa18.84■□□□□ 0.61
PDZD4-202ENST00000393758 ZNF589Q86UQ0 364 aaPredicted RBP18.84■□□□□ 0.61
PDZD4-202ENST00000393758 RAPGEF4Q8WZA2 1011 aa18.84■□□□□ 0.61
PDZD4-202ENST00000393758 ANO10Q9NW15 660 aa18.84■□□□□ 0.61
PDZD4-202ENST00000393758 ARHGEF10O15013 1369 aa18.84■□□□□ 0.61
PDZD4-202ENST00000393758 SALL3Q9BXA9 1300 aa18.84■□□□□ 0.61
PDZD4-202ENST00000393758 OTUD7BQ6GQQ9 843 aa18.84■□□□□ 0.61
PDZD4-202ENST00000393758 SNRKQ9NRH2 765 aa18.84■□□□□ 0.61
PDZD4-202ENST00000393758 TAF6LQ9Y6J9 622 aa18.84■□□□□ 0.61
PDZD4-202ENST00000393758 DMTNQ08495 405 aa18.83■□□□□ 0.6
PDZD4-202ENST00000393758 PAXBP1Q9Y5B6 917 aa18.83■□□□□ 0.6
PDZD4-202ENST00000393758 SERPINC1P01008 464 aa18.83■□□□□ 0.6
PDZD4-202ENST00000393758 IGSF1Q8N6C5 1336 aa18.82■□□□□ 0.6
PDZD4-202ENST00000393758 A0A1B0GVL5 298 aa18.82■□□□□ 0.6
PDZD4-202ENST00000393758 POLA2Q14181 598 aa18.82■□□□□ 0.6
PDZD4-202ENST00000393758 COPS6Q7L5N1 327 aa18.82■□□□□ 0.6
PDZD4-202ENST00000393758 SFPQP23246 707 aaKnown RBP eCLIP18.82■□□□□ 0.6
PDZD4-202ENST00000393758 XAGE3Q8WTP9 111 aa18.82■□□□□ 0.6
PDZD4-202ENST00000393758 TM6SF1Q9BZW5 370 aa18.82■□□□□ 0.6
PDZD4-202ENST00000393758 ARHGAP31Q2M1Z3 1444 aa18.82■□□□□ 0.6
PDZD4-202ENST00000393758 RALYLQ86SE5 291 aaKnown RBP18.82■□□□□ 0.6
PDZD4-202ENST00000393758 NECTIN1Q15223 517 aa18.81■□□□□ 0.6
PDZD4-202ENST00000393758 GTPBP4Q9BZE4 634 aaKnown RBP18.81■□□□□ 0.6
PDZD4-202ENST00000393758 CHGBP05060 677 aa18.81■□□□□ 0.6
PDZD4-202ENST00000393758 TFCP2Q12800 502 aa18.81■□□□□ 0.6
PDZD4-202ENST00000393758 LINS1Q8NG48 757 aa18.81■□□□□ 0.6
PDZD4-202ENST00000393758 FRMPD1Q5SYB0 1578 aa18.81■□□□□ 0.6
PDZD4-202ENST00000393758 A0A087WZG4 1122 aa18.81■□□□□ 0.6
PDZD4-202ENST00000393758 ELF2Q15723 593 aa18.81■□□□□ 0.6
PDZD4-202ENST00000393758 SPTLC3Q9NUV7 552 aa18.81■□□□□ 0.6
PDZD4-202ENST00000393758 ZNF215Q9UL58 517 aaPredicted RBP18.81■□□□□ 0.6
PDZD4-202ENST00000393758 PHF8Q9UPP1 1060 aa18.81■□□□□ 0.6
PDZD4-202ENST00000393758 MAP4K1Q92918 833 aa18.8■□□□□ 0.6
PDZD4-202ENST00000393758 TNRQ92752 1358 aa18.8■□□□□ 0.6
PDZD4-202ENST00000393758 IFT172Q9UG01 1749 aa18.8■□□□□ 0.6
PDZD4-202ENST00000393758 PTPDC1A2A3K4 754 aa18.8■□□□□ 0.6
PDZD4-202ENST00000393758 POLR3GO15318 223 aaPredicted RBP18.8■□□□□ 0.6
PDZD4-202ENST00000393758 SNW1Q13573 536 aaKnown RBP18.8■□□□□ 0.6
PDZD4-202ENST00000393758 COL9A3Q14050 684 aaPredicted RBP18.8■□□□□ 0.6
PDZD4-202ENST00000393758 LMOD1P29536 600 aaPredicted RBP18.8■□□□□ 0.6
PDZD4-202ENST00000393758 U3KPZ7 1027 aaPredicted RBP18.8■□□□□ 0.6
PDZD4-202ENST00000393758 ALDH1L1O75891 902 aa18.79■□□□□ 0.6
PDZD4-202ENST00000393758 C11orf57Q6ZUT1 292 aaPredicted RBP18.79■□□□□ 0.6
PDZD4-202ENST00000393758 DBNDD2Q9BQY9 259 aa18.79■□□□□ 0.6
PDZD4-202ENST00000393758 HMG20BQ9P0W2 317 aa18.79■□□□□ 0.6
PDZD4-202ENST00000393758 USP6P35125 1406 aa18.79■□□□□ 0.6
PDZD4-202ENST00000393758 URI1O94763 535 aaPredicted RBP18.79■□□□□ 0.6
PDZD4-202ENST00000393758 CFAP100Q494V2 611 aa18.79■□□□□ 0.6
PDZD4-202ENST00000393758 HSP90AB3PQ58FF7 597 aa18.79■□□□□ 0.6
PDZD4-202ENST00000393758 CCDC144BQ3MJ40 725 aa18.79■□□□□ 0.6
PDZD4-202ENST00000393758 SLFNL1Q499Z3 407 aa18.79■□□□□ 0.6
PDZD4-202ENST00000393758 CCDC144CPQ8IYA2 1237 aa18.79■□□□□ 0.6
PDZD4-202ENST00000393758 EPB41L2O43491 1005 aaKnown RBP18.78■□□□□ 0.6
PDZD4-202ENST00000393758 PDIA4P13667 645 aaKnown RBP18.78■□□□□ 0.6
PDZD4-202ENST00000393758 SYT10Q6XYQ8 523 aa18.78■□□□□ 0.6
PDZD4-202ENST00000393758 ZSCAN16Q9H4T2 348 aaPredicted RBP18.78■□□□□ 0.6
PDZD4-202ENST00000393758 OGFRQ9NZT2 677 aa18.78■□□□□ 0.6
PDZD4-202ENST00000393758 PRDM4Q9UKN5 801 aa18.78■□□□□ 0.6
PDZD4-202ENST00000393758 SETD1BQ9UPS6 1966 aaKnown RBP18.78■□□□□ 0.6
PDZD4-202ENST00000393758 NCBP1Q09161 790 aaKnown RBP18.78■□□□□ 0.6
PDZD4-202ENST00000393758 REREQ9P2R6 1566 aa18.78■□□□□ 0.6
PDZD4-202ENST00000393758 SASH1O94885 1247 aa18.78■□□□□ 0.6
PDZD4-202ENST00000393758 ZSCAN20P17040 1043 aaPredicted RBP18.78■□□□□ 0.6
PDZD4-202ENST00000393758 TTLL5Q6EMB2 1281 aa18.78■□□□□ 0.6
PDZD4-202ENST00000393758 PGBD1Q96JS3 809 aa18.78■□□□□ 0.6
PDZD4-202ENST00000393758 IFNKQ9P0W0 207 aa18.78■□□□□ 0.6
PDZD4-202ENST00000393758 NFXL1Q6ZNB6 911 aa18.77■□□□□ 0.6
PDZD4-202ENST00000393758 C8orf76Q96K31 380 aa18.77■□□□□ 0.6
PDZD4-202ENST00000393758 A2ML1A8K2U0 1454 aa18.77■□□□□ 0.6
PDZD4-202ENST00000393758 MARCKSP29966 332 aaPredicted RBP18.77■□□□□ 0.6
PDZD4-202ENST00000393758 UBXN4Q92575 508 aa18.77■□□□□ 0.6
PDZD4-202ENST00000393758 KCNA6P17658 529 aa18.77■□□□□ 0.59
PDZD4-202ENST00000393758 KRT222Q8N1A0 295 aa18.77■□□□□ 0.59
PDZD4-202ENST00000393758 GTF3C6Q969F1 213 aa18.77■□□□□ 0.59
PDZD4-202ENST00000393758 USP28Q96RU2 1077 aa18.77■□□□□ 0.59
PDZD4-202ENST00000393758 CTAGE5O15320 804 aa18.76■□□□□ 0.59
PDZD4-202ENST00000393758 USP27XA6NNY8 438 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms