RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 TAF5LO75529 589 aa21.65■■□□□ 1.06
TDP2-202ENST00000378198 KRT85P78386 507 aa21.65■■□□□ 1.06
TDP2-202ENST00000378198 PTPN12Q05209 780 aaKnown RBP21.65■■□□□ 1.06
TDP2-202ENST00000378198 HCLS1P14317 486 aaPredicted RBP21.64■■□□□ 1.05
TDP2-202ENST00000378198 ZNF589Q86UQ0 364 aaPredicted RBP21.64■■□□□ 1.05
TDP2-202ENST00000378198 TOB2Q14106 344 aaPredicted RBP21.64■■□□□ 1.05
TDP2-202ENST00000378198 TPRNQ4KMQ1 711 aa21.64■■□□□ 1.05
TDP2-202ENST00000378198 DBNLQ9UJU6 430 aaKnown RBP21.64■■□□□ 1.05
TDP2-202ENST00000378198 R3HCC1Q9Y3T6 440 aaKnown RBP21.64■■□□□ 1.05
TDP2-202ENST00000378198 ELP1O95163 1332 aa21.63■■□□□ 1.05
TDP2-202ENST00000378198 TFCP2Q12800 502 aa21.63■■□□□ 1.05
TDP2-202ENST00000378198 USP25Q9UHP3 1055 aa21.63■■□□□ 1.05
TDP2-202ENST00000378198 CSB-PGBD3P0DP91 1061 aa21.62■■□□□ 1.05
TDP2-202ENST00000378198 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.62■■□□□ 1.05
TDP2-202ENST00000378198 UBE3BQ7Z3V4 1068 aa21.62■■□□□ 1.05
TDP2-202ENST00000378198 PARP4Q9UKK3 1724 aaKnown RBP21.61■■□□□ 1.05
TDP2-202ENST00000378198 ADCY5O95622 1261 aa21.61■■□□□ 1.05
TDP2-202ENST00000378198 KIAA2012Q0VF49 1180 aa21.61■■□□□ 1.05
TDP2-202ENST00000378198 GIMAP6Q6P9H5 292 aa21.61■■□□□ 1.05
TDP2-202ENST00000378198 CDC37L1Q7L3B6 337 aa21.61■■□□□ 1.05
TDP2-202ENST00000378198 CYP27B1O15528 508 aa21.6■■□□□ 1.05
TDP2-202ENST00000378198 DTNBO60941 627 aa21.6■■□□□ 1.05
TDP2-202ENST00000378198 KDM4AO75164 1064 aa21.6■■□□□ 1.05
TDP2-202ENST00000378198 PLBD2Q8NHP8 589 aa21.6■■□□□ 1.05
TDP2-202ENST00000378198 EDC3Q96F86 508 aaKnown RBP21.6■■□□□ 1.05
TDP2-202ENST00000378198 A0A087WZG4 1122 aa21.6■■□□□ 1.05
TDP2-202ENST00000378198 COL9A3Q14050 684 aaPredicted RBP21.6■■□□□ 1.05
TDP2-202ENST00000378198 TTC6Q86TZ1 520 aa21.6■■□□□ 1.05
TDP2-202ENST00000378198 TCEANC2Q96MN5 208 aa21.6■■□□□ 1.05
TDP2-202ENST00000378198 TAF6LQ9Y6J9 622 aa21.6■■□□□ 1.05
TDP2-202ENST00000378198 U3KPZ7 1027 aaPredicted RBP21.6■■□□□ 1.05
TDP2-202ENST00000378198 ATF3P18847 181 aa21.59■■□□□ 1.05
TDP2-202ENST00000378198 JARID2Q92833 1246 aaPredicted RBP21.59■■□□□ 1.05
TDP2-202ENST00000378198 NEK1Q96PY6 1258 aa21.59■■□□□ 1.05
TDP2-202ENST00000378198 HAUS7Q99871 368 aa21.59■■□□□ 1.05
TDP2-202ENST00000378198 CASP7P55210 303 aa21.59■■□□□ 1.05
TDP2-202ENST00000378198 CABP4P57796 275 aa21.59■■□□□ 1.05
TDP2-202ENST00000378198 UBE2Q2Q8WVN8 375 aa21.59■■□□□ 1.05
TDP2-202ENST00000378198 SCAND2PQ9GZW5 306 aaPredicted RBP21.59■■□□□ 1.05
TDP2-202ENST00000378198 LAMA4Q16363 1823 aa21.58■■□□□ 1.05
TDP2-202ENST00000378198 GLI3P10071 1580 aa21.58■■□□□ 1.05
TDP2-202ENST00000378198 CCDC192P0DO97 292 aa21.58■■□□□ 1.05
TDP2-202ENST00000378198 MCMDC2Q4G0Z9 681 aa21.58■■□□□ 1.05
TDP2-202ENST00000378198 ZNF609O15014 1411 aa21.58■■□□□ 1.04
TDP2-202ENST00000378198 PIP4K2AP48426 406 aaPredicted RBP21.57■■□□□ 1.04
TDP2-202ENST00000378198 DBNDD2Q9BQY9 259 aa21.57■■□□□ 1.04
TDP2-202ENST00000378198 DCCP43146 1447 aa21.57■■□□□ 1.04
TDP2-202ENST00000378198 ATP5J2-PTCD1G3V325 749 aa21.57■■□□□ 1.04
TDP2-202ENST00000378198 PTCD1O75127 700 aaKnown RBP21.57■■□□□ 1.04
TDP2-202ENST00000378198 FERMT3Q86UX7 667 aa21.57■■□□□ 1.04
TDP2-202ENST00000378198 DNAJC2Q99543 621 aaKnown RBP21.56■■□□□ 1.04
TDP2-202ENST00000378198 NUP188Q5SRE5 1749 aa21.56■■□□□ 1.04
TDP2-202ENST00000378198 STK3Q13188 491 aa21.56■■□□□ 1.04
TDP2-202ENST00000378198 TICAM2Q86XR7 235 aa21.56■■□□□ 1.04
TDP2-202ENST00000378198 GTF3C6Q969F1 213 aa21.56■■□□□ 1.04
TDP2-202ENST00000378198 TNS3Q68CZ2 1445 aa21.55■■□□□ 1.04
TDP2-202ENST00000378198 SASS6Q6UVJ0 657 aa21.55■■□□□ 1.04
TDP2-202ENST00000378198 NUP62CLQ9H1M0 184 aa21.55■■□□□ 1.04
TDP2-202ENST00000378198 SH3TC1Q8TE82 1336 aa21.55■■□□□ 1.04
TDP2-202ENST00000378198 MYH15Q9Y2K3 1946 aa21.55■■□□□ 1.04
TDP2-202ENST00000378198 H7C1W4 665 aa21.54■■□□□ 1.04
TDP2-202ENST00000378198 LMBR1LQ6UX01 489 aa21.54■■□□□ 1.04
TDP2-202ENST00000378198 KBTBD3Q8NAB2 608 aa21.54■■□□□ 1.04
TDP2-202ENST00000378198 PIBF1Q8WXW3 757 aa21.54■■□□□ 1.04
TDP2-202ENST00000378198 SPATA32Q96LK8 384 aa21.54■■□□□ 1.04
TDP2-202ENST00000378198 PALLDQ8WX93 1383 aa21.54■■□□□ 1.04
TDP2-202ENST00000378198 MAP3K11Q16584 847 aa21.54■■□□□ 1.04
TDP2-202ENST00000378198 Q6ZUG5 572 aa21.54■■□□□ 1.04
TDP2-202ENST00000378198 UBR2Q8IWV8 1755 aa21.53■■□□□ 1.04
TDP2-202ENST00000378198 GOLGA6L4A6NEF3 574 aa21.53■■□□□ 1.04
TDP2-202ENST00000378198 CYP21A2P08686 494 aa21.53■■□□□ 1.04
TDP2-202ENST00000378198 FOXO4P98177 505 aa21.53■■□□□ 1.04
TDP2-202ENST00000378198 FAM173BQ6P4H8 233 aa21.53■■□□□ 1.04
TDP2-202ENST00000378198 DDX17Q92841 729 aaKnown RBP21.53■■□□□ 1.04
TDP2-202ENST00000378198 GPR108Q9NPR9 543 aa21.53■■□□□ 1.04
TDP2-202ENST00000378198 TJP1Q07157 1748 aa21.53■■□□□ 1.04
TDP2-202ENST00000378198 UQCRHLA0A096LP55 91 aa21.52■■□□□ 1.04
TDP2-202ENST00000378198 UQCRHP07919 91 aa21.52■■□□□ 1.04
TDP2-202ENST00000378198 HMGB1P09429 215 aaKnown RBP21.52■■□□□ 1.04
TDP2-202ENST00000378198 CHRNA2Q15822 529 aa21.52■■□□□ 1.04
TDP2-202ENST00000378198 CCDC129Q6ZRS4 1044 aa21.52■■□□□ 1.04
TDP2-202ENST00000378198 CABLES1Q8TDN4 633 aa21.52■■□□□ 1.04
TDP2-202ENST00000378198 SEC62Q99442 399 aaKnown RBP21.52■■□□□ 1.04
TDP2-202ENST00000378198 NDUFB9Q9Y6M9 179 aa21.52■■□□□ 1.04
TDP2-202ENST00000378198 TPM3P06753 285 aa21.52■■□□□ 1.04
TDP2-202ENST00000378198 LIG1P18858 919 aa21.52■■□□□ 1.04
TDP2-202ENST00000378198 HELLSQ9NRZ9 838 aa21.52■■□□□ 1.04
TDP2-202ENST00000378198 SPEF2Q9C093 1822 aa21.52■■□□□ 1.03
TDP2-202ENST00000378198 CPDO75976 1380 aa21.51■■□□□ 1.03
TDP2-202ENST00000378198 PRKCSHP14314 528 aaPredicted RBP21.51■■□□□ 1.03
TDP2-202ENST00000378198 DDX46Q7L014 1031 aaKnown RBP21.51■■□□□ 1.03
TDP2-202ENST00000378198 PDCL3Q9H2J4 239 aa21.51■■□□□ 1.03
TDP2-202ENST00000378198 DDX19AQ9NUU7 478 aaKnown RBP21.51■■□□□ 1.03
TDP2-202ENST00000378198 TMEM94Q12767 1356 aa21.51■■□□□ 1.03
TDP2-202ENST00000378198 STRCP1A6NGW2 1772 aa21.51■■□□□ 1.03
TDP2-202ENST00000378198 HSP90B1P14625 803 aaKnown RBP21.51■■□□□ 1.03
TDP2-202ENST00000378198 GLIPR1L2Q4G1C9 344 aa21.51■■□□□ 1.03
TDP2-202ENST00000378198 FAM200AQ8TCP9 573 aa21.51■■□□□ 1.03
TDP2-202ENST00000378198 LEO1Q8WVC0 666 aaPredicted RBP21.51■■□□□ 1.03
TDP2-202ENST00000378198 ZNF830Q96NB3 372 aaPredicted RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms