RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 ANKRD13DQ6ZTN6 518 aa12.72□□□□□ -0.37
ABCF1-202ENST00000376545 KLHDC4Q8TBB5 520 aa12.72□□□□□ -0.37
ABCF1-202ENST00000376545 ZNF496Q96IT1 587 aaPredicted RBP12.72□□□□□ -0.37
ABCF1-202ENST00000376545 DBNLQ9UJU6 430 aaKnown RBP12.72□□□□□ -0.37
ABCF1-202ENST00000376545 TNNI3KQ59H18 835 aa12.71□□□□□ -0.37
ABCF1-202ENST00000376545 LARP1BQ659C4 914 aaKnown RBP12.71□□□□□ -0.37
ABCF1-202ENST00000376545 TICAM2Q86XR7 235 aa12.71□□□□□ -0.37
ABCF1-202ENST00000376545 MYD88Q99836 296 aa12.71□□□□□ -0.37
ABCF1-202ENST00000376545 FPGT-TNNI3KV9GXZ4 949 aa12.71□□□□□ -0.37
ABCF1-202ENST00000376545 ADCY5O95622 1261 aa12.71□□□□□ -0.37
ABCF1-202ENST00000376545 SNRPA1P09661 255 aaKnown RBP12.71□□□□□ -0.37
ABCF1-202ENST00000376545 TTC6Q86TZ1 520 aa12.71□□□□□ -0.37
ABCF1-202ENST00000376545 IFNL2Q8IZJ0 200 aa12.71□□□□□ -0.37
ABCF1-202ENST00000376545 RAPGEF4Q8WZA2 1011 aa12.71□□□□□ -0.37
ABCF1-202ENST00000376545 SIL1Q9H173 461 aa12.71□□□□□ -0.37
ABCF1-202ENST00000376545 USP25Q9UHP3 1055 aa12.71□□□□□ -0.37
ABCF1-202ENST00000376545 R3HCC1Q9Y3T6 440 aaKnown RBP12.71□□□□□ -0.37
ABCF1-202ENST00000376545 PAPPAQ13219 1627 aa12.71□□□□□ -0.38
ABCF1-202ENST00000376545 CDC37L1Q7L3B6 337 aa12.71□□□□□ -0.38
ABCF1-202ENST00000376545 KIAA2012Q0VF49 1180 aa12.7□□□□□ -0.38
ABCF1-202ENST00000376545 PIBF1Q8WXW3 757 aa12.7□□□□□ -0.38
ABCF1-202ENST00000376545 PDCL3Q9H2J4 239 aa12.7□□□□□ -0.38
ABCF1-202ENST00000376545 ZNF609O15014 1411 aa12.7□□□□□ -0.38
ABCF1-202ENST00000376545 MYL6BP14649 208 aa12.7□□□□□ -0.38
ABCF1-202ENST00000376545 TATP17735 454 aaPredicted RBP12.7□□□□□ -0.38
ABCF1-202ENST00000376545 KRT85P78386 507 aa12.7□□□□□ -0.38
ABCF1-202ENST00000376545 KRT32Q14532 448 aa12.7□□□□□ -0.38
ABCF1-202ENST00000376545 GIMAP6Q6P9H5 292 aa12.7□□□□□ -0.38
ABCF1-202ENST00000376545 RBM43Q6ZSC3 357 aaKnown RBP12.7□□□□□ -0.38
ABCF1-202ENST00000376545 DCAF5Q96JK2 942 aa12.7□□□□□ -0.38
ABCF1-202ENST00000376545 C19orf44Q9H6X5 657 aa12.7□□□□□ -0.38
ABCF1-202ENST00000376545 USP16Q9Y5T5 823 aa12.7□□□□□ -0.38
ABCF1-202ENST00000376545 SPEF2Q9C093 1822 aa12.7□□□□□ -0.38
ABCF1-202ENST00000376545 AP5Z1O43299 807 aa12.69□□□□□ -0.38
ABCF1-202ENST00000376545 DCCP43146 1447 aa12.69□□□□□ -0.38
ABCF1-202ENST00000376545 KCNJ4P48050 445 aa12.69□□□□□ -0.38
ABCF1-202ENST00000376545 RBM10P98175 930 aaKnown RBP12.69□□□□□ -0.38
ABCF1-202ENST00000376545 DDX54Q8TDD1 881 aaKnown RBP12.69□□□□□ -0.38
ABCF1-202ENST00000376545 HAUS7Q99871 368 aa12.69□□□□□ -0.38
ABCF1-202ENST00000376545 VPS37CA5D8V6 355 aaPredicted RBP12.69□□□□□ -0.38
ABCF1-202ENST00000376545 SASS6Q6UVJ0 657 aa12.69□□□□□ -0.38
ABCF1-202ENST00000376545 SPTLC3Q9NUV7 552 aa12.69□□□□□ -0.38
ABCF1-202ENST00000376545 STRCP1A6NGW2 1772 aa12.69□□□□□ -0.38
ABCF1-202ENST00000376545 TFCP2Q12800 502 aa12.68□□□□□ -0.38
ABCF1-202ENST00000376545 PALLDQ8WX93 1383 aa12.68□□□□□ -0.38
ABCF1-202ENST00000376545 CYP27B1O15528 508 aa12.68□□□□□ -0.38
ABCF1-202ENST00000376545 GTF3C6Q969F1 213 aa12.68□□□□□ -0.38
ABCF1-202ENST00000376545 PTMAP06454 111 aaKnown RBP12.68□□□□□ -0.38
ABCF1-202ENST00000376545 ZC3H6P61129 1189 aaKnown RBP12.68□□□□□ -0.38
ABCF1-202ENST00000376545 LMOD2Q6P5Q4 547 aa12.68□□□□□ -0.38
ABCF1-202ENST00000376545 EDC3Q96F86 508 aaKnown RBP12.68□□□□□ -0.38
ABCF1-202ENST00000376545 FMNL2Q96PY5 1086 aa12.68□□□□□ -0.38
ABCF1-202ENST00000376545 SCAND2PQ9GZW5 306 aaPredicted RBP12.68□□□□□ -0.38
ABCF1-202ENST00000376545 SH3TC1Q8TE82 1336 aa12.67□□□□□ -0.38
ABCF1-202ENST00000376545 DYNC1I1O14576 645 aa12.67□□□□□ -0.38
ABCF1-202ENST00000376545 DTNBO60941 627 aa12.67□□□□□ -0.38
ABCF1-202ENST00000376545 PLBD2Q8NHP8 589 aa12.67□□□□□ -0.38
ABCF1-202ENST00000376545 U3KPZ7 1027 aaPredicted RBP12.67□□□□□ -0.38
ABCF1-202ENST00000376545 CCDC192P0DO97 292 aa12.67□□□□□ -0.38
ABCF1-202ENST00000376545 AEBP2Q6ZN18 517 aaPredicted RBP12.67□□□□□ -0.38
ABCF1-202ENST00000376545 UQCRHLA0A096LP55 91 aa12.66□□□□□ -0.38
ABCF1-202ENST00000376545 H7C1W4 665 aa12.66□□□□□ -0.38
ABCF1-202ENST00000376545 UQCRHP07919 91 aa12.66□□□□□ -0.38
ABCF1-202ENST00000376545 FOXO4P98177 505 aa12.66□□□□□ -0.38
ABCF1-202ENST00000376545 PROSER2Q86WR7 435 aaPredicted RBP12.66□□□□□ -0.38
ABCF1-202ENST00000376545 NEK1Q96PY6 1258 aa12.66□□□□□ -0.38
ABCF1-202ENST00000376545 GPR108Q9NPR9 543 aa12.66□□□□□ -0.38
ABCF1-202ENST00000376545 NLRP2Q9NX02 1062 aa12.66□□□□□ -0.38
ABCF1-202ENST00000376545 CPDO75976 1380 aa12.66□□□□□ -0.38
ABCF1-202ENST00000376545 LIG1P18858 919 aa12.66□□□□□ -0.38
ABCF1-202ENST00000376545 MCMDC2Q4G0Z9 681 aa12.66□□□□□ -0.38
ABCF1-202ENST00000376545 SMARCC2Q8TAQ2 1214 aa12.66□□□□□ -0.38
ABCF1-202ENST00000376545 DDX60Q8IY21 1712 aaKnown RBP12.66□□□□□ -0.38
ABCF1-202ENST00000376545 RESTQ13127 1097 aa12.66□□□□□ -0.38
ABCF1-202ENST00000376545 LEO1Q8WVC0 666 aaPredicted RBP12.66□□□□□ -0.38
ABCF1-202ENST00000376545 TCEANC2Q96MN5 208 aa12.66□□□□□ -0.38
ABCF1-202ENST00000376545 AGXT2Q9BYV1 514 aa12.66□□□□□ -0.38
ABCF1-202ENST00000376545 CYP21A2P08686 494 aa12.65□□□□□ -0.38
ABCF1-202ENST00000376545 NOLC1Q14978 699 aaKnown RBP eCLIP12.65□□□□□ -0.38
ABCF1-202ENST00000376545 UBE3BQ7Z3V4 1068 aa12.65□□□□□ -0.38
ABCF1-202ENST00000376545 KBTBD3Q8NAB2 608 aa12.65□□□□□ -0.38
ABCF1-202ENST00000376545 DBNDD2Q9BQY9 259 aa12.65□□□□□ -0.38
ABCF1-202ENST00000376545 MRVI1Q9Y6F6 885 aa12.65□□□□□ -0.38
ABCF1-202ENST00000376545 TNS3Q68CZ2 1445 aa12.65□□□□□ -0.38
ABCF1-202ENST00000376545 KCPQ6ZWJ8 1503 aa12.65□□□□□ -0.38
ABCF1-202ENST00000376545 PDE4CQ08493 712 aa12.65□□□□□ -0.38
ABCF1-202ENST00000376545 ATG9AQ7Z3C6 839 aa12.65□□□□□ -0.38
ABCF1-202ENST00000376545 TTC5Q8N0Z6 440 aa12.65□□□□□ -0.38
ABCF1-202ENST00000376545 FAM200AQ8TCP9 573 aa12.65□□□□□ -0.38
ABCF1-202ENST00000376545 SHANK3Q9BYB0 1731 aa12.64□□□□□ -0.39
ABCF1-202ENST00000376545 TPM3P06753 285 aa12.64□□□□□ -0.39
ABCF1-202ENST00000376545 MAP3K11Q16584 847 aa12.64□□□□□ -0.39
ABCF1-202ENST00000376545 FAM173BQ6P4H8 233 aa12.64□□□□□ -0.39
ABCF1-202ENST00000376545 LLPHQ9BRT6 129 aaKnown RBP12.64□□□□□ -0.39
ABCF1-202ENST00000376545 NUP62CLQ9H1M0 184 aa12.64□□□□□ -0.39
ABCF1-202ENST00000376545 DDX19AQ9NUU7 478 aaKnown RBP12.64□□□□□ -0.39
ABCF1-202ENST00000376545 A0A087WZG4 1122 aa12.64□□□□□ -0.39
ABCF1-202ENST00000376545 GTF2F1P35269 517 aaKnown RBP eCLIP12.64□□□□□ -0.39
ABCF1-202ENST00000376545 FERMT3Q86UX7 667 aa12.64□□□□□ -0.39
ABCF1-202ENST00000376545 ZNF830Q96NB3 372 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms