RNA–Protein interactions for RNA: ENST00000327443.8

SP1-201, Transcript of Sp1 transcription factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SP1, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-201ENST00000327443 TEX35Q5T0J7 233 aa11.59□□□□□ -0.55
SP1-201ENST00000327443 SNX21Q969T3 373 aa11.59□□□□□ -0.55
SP1-201ENST00000327443 KIF3CO14782 793 aa11.59□□□□□ -0.55
SP1-201ENST00000327443 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.59□□□□□ -0.55
SP1-201ENST00000327443 NUTM2GQ5VZR2 741 aa11.59□□□□□ -0.55
SP1-201ENST00000327443 NAIF1Q69YI7 327 aaPredicted RBP11.59□□□□□ -0.55
SP1-201ENST00000327443 ARMCX6Q7L4S7 300 aa11.59□□□□□ -0.55
SP1-201ENST00000327443 WDR17Q8IZU2 1322 aa11.58□□□□□ -0.56
SP1-201ENST00000327443 SMTNL1A8MU46 457 aa11.58□□□□□ -0.56
SP1-201ENST00000327443 MAGEA9P43362 315 aa11.58□□□□□ -0.56
SP1-201ENST00000327443 SMARCE1Q969G3 411 aa11.58□□□□□ -0.56
SP1-201ENST00000327443 ADCY5O95622 1261 aa11.58□□□□□ -0.56
SP1-201ENST00000327443 CCDC112Q8NEF3 446 aa11.58□□□□□ -0.56
SP1-201ENST00000327443 SLC24A3Q9HC58 644 aa11.58□□□□□ -0.56
SP1-201ENST00000327443 MBIPQ9NS73 344 aa11.58□□□□□ -0.56
SP1-201ENST00000327443 IRAK4Q9NWZ3 460 aa11.58□□□□□ -0.56
SP1-201ENST00000327443 NSFL1CQ9UNZ2 370 aaKnown RBP11.58□□□□□ -0.56
SP1-201ENST00000327443 CD2BP2O95400 341 aaKnown RBP11.57□□□□□ -0.56
SP1-201ENST00000327443 LIG1P18858 919 aa11.57□□□□□ -0.56
SP1-201ENST00000327443 EXOSC9Q06265 439 aaKnown RBP11.57□□□□□ -0.56
SP1-201ENST00000327443 TTLL5Q6EMB2 1281 aa11.57□□□□□ -0.56
SP1-201ENST00000327443 SUGP1Q8IWZ8 645 aaKnown RBP11.57□□□□□ -0.56
SP1-201ENST00000327443 TSPY26PQ9H489 355 aa11.57□□□□□ -0.56
SP1-201ENST00000327443 PXDNLA1KZ92 1463 aa11.57□□□□□ -0.56
SP1-201ENST00000327443 CCDC196A0A1B0GTZ2 297 aa11.57□□□□□ -0.56
SP1-201ENST00000327443 KCNA4P22459 653 aa11.57□□□□□ -0.56
SP1-201ENST00000327443 TRDNQ13061 729 aa11.57□□□□□ -0.56
SP1-201ENST00000327443 CCDC96Q2M329 555 aa11.57□□□□□ -0.56
SP1-201ENST00000327443 C16orf45Q96MC5 204 aaPredicted RBP11.57□□□□□ -0.56
SP1-201ENST00000327443 NBPF3Q9H094 633 aa11.57□□□□□ -0.56
SP1-201ENST00000327443 PDZRN3Q9UPQ7 1066 aa11.57□□□□□ -0.56
SP1-201ENST00000327443 VAMP4O75379 141 aa11.56□□□□□ -0.56
SP1-201ENST00000327443 LAMB4A4D0S4 1761 aa11.56□□□□□ -0.56
SP1-201ENST00000327443 ZKSCAN2Q63HK3 967 aa11.56□□□□□ -0.56
SP1-201ENST00000327443 UBR2Q8IWV8 1755 aa11.56□□□□□ -0.56
SP1-201ENST00000327443 CICQ96RK0 1608 aaPredicted RBP11.55□□□□□ -0.56
SP1-201ENST00000327443 HEG1Q9ULI3 1381 aa11.55□□□□□ -0.56
SP1-201ENST00000327443 PLCB2Q00722 1185 aa11.55□□□□□ -0.56
SP1-201ENST00000327443 KCNF1Q9H3M0 494 aa11.55□□□□□ -0.56
SP1-201ENST00000327443 AXIN2Q9Y2T1 843 aa11.55□□□□□ -0.56
SP1-201ENST00000327443 DISP2A7MBM2 1401 aa11.55□□□□□ -0.56
SP1-201ENST00000327443 MEGF6O75095 1541 aa11.55□□□□□ -0.56
SP1-201ENST00000327443 NPHP1O15259 732 aa11.55□□□□□ -0.56
SP1-201ENST00000327443 TOM1O60784 492 aa11.55□□□□□ -0.56
SP1-201ENST00000327443 IPO7O95373 1038 aaKnown RBP11.55□□□□□ -0.56
SP1-201ENST00000327443 TPM3P06753 285 aa11.55□□□□□ -0.56
SP1-201ENST00000327443 FBXO18Q8NFZ0 1043 aa11.55□□□□□ -0.56
SP1-201ENST00000327443 CEP89Q96ST8 783 aa11.55□□□□□ -0.56
SP1-201ENST00000327443 NUCKS1Q9H1E3 243 aaKnown RBP11.55□□□□□ -0.56
SP1-201ENST00000327443 SPG7Q9UQ90 795 aa11.55□□□□□ -0.56
SP1-201ENST00000327443 EXOC6BQ9Y2D4 811 aa11.55□□□□□ -0.56
SP1-201ENST00000327443 MTA1Q13330 715 aa11.55□□□□□ -0.56
SP1-201ENST00000327443 TAF7Q15545 349 aaPredicted RBP11.55□□□□□ -0.56
SP1-201ENST00000327443 CC2D2BQ6DHV5 1058 aa11.55□□□□□ -0.56
SP1-201ENST00000327443 MMS22LQ6ZRQ5 1243 aa11.55□□□□□ -0.56
SP1-201ENST00000327443 AK9Q5TCS8 1911 aa11.54□□□□□ -0.56
SP1-201ENST00000327443 NEBLO76041 1014 aa11.54□□□□□ -0.56
SP1-201ENST00000327443 ELF2Q15723 593 aa11.54□□□□□ -0.56
SP1-201ENST00000327443 C1QTNF12Q5T7M4 302 aa11.54□□□□□ -0.56
SP1-201ENST00000327443 TBC1D22AQ8WUA7 517 aa11.54□□□□□ -0.56
SP1-201ENST00000327443 CHAMP1Q96JM3 812 aa11.54□□□□□ -0.56
SP1-201ENST00000327443 PAIP2Q9BPZ3 127 aaKnown RBP11.54□□□□□ -0.56
SP1-201ENST00000327443 PTPRCP08575 1304 aa11.54□□□□□ -0.56
SP1-201ENST00000327443 GPS2Q13227 327 aa11.54□□□□□ -0.56
SP1-201ENST00000327443 MRPL50Q8N5N7 158 aaKnown RBP11.54□□□□□ -0.56
SP1-201ENST00000327443 KIF2CQ99661 725 aa11.54□□□□□ -0.56
SP1-201ENST00000327443 K7ELQ4 463 aaPredicted RBP11.53□□□□□ -0.56
SP1-201ENST00000327443 CTAGE5O15320 804 aa11.53□□□□□ -0.56
SP1-201ENST00000327443 TATP17735 454 aaPredicted RBP11.53□□□□□ -0.56
SP1-201ENST00000327443 PLA2G4AP47712 749 aa11.53□□□□□ -0.56
SP1-201ENST00000327443 TSR2Q969E8 191 aaKnown RBP11.53□□□□□ -0.56
SP1-201ENST00000327443 ZNF215Q9UL58 517 aaPredicted RBP11.53□□□□□ -0.56
SP1-201ENST00000327443 FAXDC2Q96IV6 333 aa11.53□□□□□ -0.56
SP1-201ENST00000327443 FAM210AQ96ND0 272 aa11.53□□□□□ -0.56
SP1-201ENST00000327443 EIF3CLB5ME19 914 aaKnown RBP11.52□□□□□ -0.56
SP1-201ENST00000327443 ANKRD65E5RJM6 399 aa11.52□□□□□ -0.56
SP1-201ENST00000327443 NKX1-1Q15270 411 aaPredicted RBP11.52□□□□□ -0.56
SP1-201ENST00000327443 TWISTNBQ3B726 338 aaPredicted RBP11.52□□□□□ -0.56
SP1-201ENST00000327443 GOLGA5Q8TBA6 731 aa11.52□□□□□ -0.56
SP1-201ENST00000327443 SSH1Q8WYL5 1049 aa11.52□□□□□ -0.56
SP1-201ENST00000327443 EIF3CQ99613 913 aaKnown RBP11.52□□□□□ -0.56
SP1-201ENST00000327443 PAXBP1Q9Y5B6 917 aa11.52□□□□□ -0.56
SP1-201ENST00000327443 FHOD1Q9Y613 1164 aa11.52□□□□□ -0.56
SP1-201ENST00000327443 ABCC4O15439 1325 aa11.52□□□□□ -0.56
SP1-201ENST00000327443 NUCB2P80303 420 aa11.52□□□□□ -0.57
SP1-201ENST00000327443 PKP1Q13835 747 aa11.52□□□□□ -0.57
SP1-201ENST00000327443 ATF7IPQ6VMQ6 1270 aa11.52□□□□□ -0.57
SP1-201ENST00000327443 IL17REQ8NFR9 667 aa11.52□□□□□ -0.57
SP1-201ENST00000327443 PPM1EQ8WY54 764 aa11.52□□□□□ -0.57
SP1-201ENST00000327443 RAPGEF4Q8WZA2 1011 aa11.52□□□□□ -0.57
SP1-201ENST00000327443 API5Q9BZZ5 524 aaKnown RBP11.52□□□□□ -0.57
SP1-201ENST00000327443 ZCCHC17Q9NP64 241 aaKnown RBP11.52□□□□□ -0.57
SP1-201ENST00000327443 PAX7P23759 505 aa11.51□□□□□ -0.57
SP1-201ENST00000327443 C1orf141Q5JVX7 400 aa11.51□□□□□ -0.57
SP1-201ENST00000327443 LMOD2Q6P5Q4 547 aa11.51□□□□□ -0.57
SP1-201ENST00000327443 ANKRD23Q86SG2 305 aa11.51□□□□□ -0.57
SP1-201ENST00000327443 SPC24Q8NBT2 197 aa11.51□□□□□ -0.57
SP1-201ENST00000327443 DDX17Q92841 729 aaKnown RBP11.51□□□□□ -0.57
SP1-201ENST00000327443 CDCA7Q9BWT1 371 aaPredicted RBP11.51□□□□□ -0.57
SP1-201ENST00000327443 GLI3P10071 1580 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms