RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 CCDC173Q0VFZ6 552 aa15.82■□□□□ 0.12
CPNE1-201ENST00000317677 G3BP1Q13283 466 aaKnown RBP eCLIP15.82■□□□□ 0.121e-8■□□□□ 11.2
CPNE1-201ENST00000317677 ITPK1Q13572 414 aa15.82■□□□□ 0.12
CPNE1-201ENST00000317677 BCL11BQ9C0K0 894 aaPredicted RBP15.82■□□□□ 0.12
CPNE1-201ENST00000317677 GZF1Q9H116 711 aaPredicted RBP15.82■□□□□ 0.12
CPNE1-201ENST00000317677 IL25Q9H293 177 aa15.82■□□□□ 0.12
CPNE1-201ENST00000317677 TLR7Q9NYK1 1049 aaKnown RBP15.82■□□□□ 0.12
CPNE1-201ENST00000317677 TRIM28Q13263 835 aaKnown RBP15.81■□□□□ 0.12
CPNE1-201ENST00000317677 HS1BP3Q53T59 392 aa15.81■□□□□ 0.12
CPNE1-201ENST00000317677 INTS5Q6P9B9 1019 aaKnown RBP15.81■□□□□ 0.12
CPNE1-201ENST00000317677 CLASRPQ8N2M8 674 aaKnown RBP15.81■□□□□ 0.12
CPNE1-201ENST00000317677 RILPL2Q969X0 211 aa15.81■□□□□ 0.12
CPNE1-201ENST00000317677 RGPD3A6NKT7 1758 aaPredicted RBP15.8■□□□□ 0.12
CPNE1-201ENST00000317677 TRIM6-TRIM34B2RNG4 842 aa15.8■□□□□ 0.12
CPNE1-201ENST00000317677 TTC41PQ6P2S7 1318 aa15.8■□□□□ 0.12
CPNE1-201ENST00000317677 GIGYF2Q6Y7W6 1299 aaKnown RBP15.8■□□□□ 0.12
CPNE1-201ENST00000317677 KIF6Q6ZMV9 814 aa15.8■□□□□ 0.12
CPNE1-201ENST00000317677 RGPD4Q7Z3J3 1758 aa15.8■□□□□ 0.12
CPNE1-201ENST00000317677 AACSQ86V21 672 aa15.8■□□□□ 0.12
CPNE1-201ENST00000317677 ZNF831Q5JPB2 1677 aa15.8■□□□□ 0.12
CPNE1-201ENST00000317677 PALLDQ8WX93 1383 aa15.8■□□□□ 0.12
CPNE1-201ENST00000317677 PTF1AQ7RTS3 328 aa15.8■□□□□ 0.12
CPNE1-201ENST00000317677 ESYT1Q9BSJ8 1104 aa15.8■□□□□ 0.12
CPNE1-201ENST00000317677 LOC102724428A0A0B4J2F2 783 aa15.79■□□□□ 0.12
CPNE1-201ENST00000317677 ERC2O15083 957 aa15.79■□□□□ 0.12
CPNE1-201ENST00000317677 PTMSP20962 102 aa15.79■□□□□ 0.12
CPNE1-201ENST00000317677 SIK1P57059 783 aa15.79■□□□□ 0.12
CPNE1-201ENST00000317677 DMTNQ08495 405 aa15.79■□□□□ 0.12
CPNE1-201ENST00000317677 ARXQ96QS3 562 aa15.79■□□□□ 0.12
CPNE1-201ENST00000317677 CCDC8Q9H0W5 538 aaPredicted RBP15.79■□□□□ 0.12
CPNE1-201ENST00000317677 CD2BP2O95400 341 aaKnown RBP15.78■□□□□ 0.12
CPNE1-201ENST00000317677 IL6STP40189 918 aaPredicted RBP15.78■□□□□ 0.12
CPNE1-201ENST00000317677 EIF5P55010 431 aaKnown RBP15.78■□□□□ 0.12
CPNE1-201ENST00000317677 SKOR2Q2VWA4 1001 aaPredicted RBP15.78■□□□□ 0.12
CPNE1-201ENST00000317677 SYNE4Q8N205 404 aa15.78■□□□□ 0.12
CPNE1-201ENST00000317677 ECHDC1Q9NTX5 307 aa15.78■□□□□ 0.12
CPNE1-201ENST00000317677 PSDA5PKW4 1024 aaPredicted RBP15.78■□□□□ 0.12
CPNE1-201ENST00000317677 PLSCR1O15162 318 aa15.78■□□□□ 0.12
CPNE1-201ENST00000317677 ATP6V1AP38606 617 aa15.78■□□□□ 0.12
CPNE1-201ENST00000317677 CASC1Q6TDU7 716 aa15.78■□□□□ 0.12
CPNE1-201ENST00000317677 TBC1D2BQ9UPU7 963 aa15.78■□□□□ 0.12
CPNE1-201ENST00000317677 BTAF1O14981 1849 aa15.78■□□□□ 0.12
CPNE1-201ENST00000317677 DYNC1I1O14576 645 aa15.77■□□□□ 0.12
CPNE1-201ENST00000317677 PCCAP05165 728 aaPredicted RBP15.77■□□□□ 0.12
CPNE1-201ENST00000317677 IFIT2P09913 472 aaKnown RBP15.77■□□□□ 0.12
CPNE1-201ENST00000317677 GPTP24298 496 aa15.77■□□□□ 0.12
CPNE1-201ENST00000317677 CRKLP46109 303 aaKnown RBP15.77■□□□□ 0.12
CPNE1-201ENST00000317677 TFCP2Q12800 502 aa15.77■□□□□ 0.12
CPNE1-201ENST00000317677 ATG9AQ7Z3C6 839 aa15.77■□□□□ 0.12
CPNE1-201ENST00000317677 NLRP10Q86W26 655 aa15.77■□□□□ 0.12
CPNE1-201ENST00000317677 NHSQ6T4R5 1651 aa15.77■□□□□ 0.11
CPNE1-201ENST00000317677 GLRX3O76003 335 aaKnown RBP15.76■□□□□ 0.11
CPNE1-201ENST00000317677 FAM89AQ96GI7 184 aa15.76■□□□□ 0.11
CPNE1-201ENST00000317677 CCDC87Q9NVE4 849 aa15.76■□□□□ 0.11
CPNE1-201ENST00000317677 MYH3P11055 1940 aa15.76■□□□□ 0.11
CPNE1-201ENST00000317677 DZIP3Q86Y13 1208 aaKnown RBP15.76■□□□□ 0.11
CPNE1-201ENST00000317677 SNX21Q969T3 373 aa15.76■□□□□ 0.11
CPNE1-201ENST00000317677 ZNF594Q96JF6 807 aaPredicted RBP15.76■□□□□ 0.11
CPNE1-201ENST00000317677 UBN2Q6ZU65 1347 aa15.75■□□□□ 0.11
CPNE1-201ENST00000317677 BCORQ6W2J9 1755 aa15.75■□□□□ 0.11
CPNE1-201ENST00000317677 ZNF500O60304 480 aaPredicted RBP15.75■□□□□ 0.11
CPNE1-201ENST00000317677 PDIA4P13667 645 aaKnown RBP15.75■□□□□ 0.11
CPNE1-201ENST00000317677 R3HDM1Q15032 1099 aaKnown RBP15.75■□□□□ 0.11
CPNE1-201ENST00000317677 ZBTB38Q8NAP3 1195 aaPredicted RBP15.75■□□□□ 0.11
CPNE1-201ENST00000317677 PLA2G12BQ9BX93 195 aa15.75■□□□□ 0.11
CPNE1-201ENST00000317677 DBNLQ9UJU6 430 aaKnown RBP15.75■□□□□ 0.11
CPNE1-201ENST00000317677 CHMP3Q9Y3E7 222 aa15.75■□□□□ 0.11
CPNE1-201ENST00000317677 ERVV-1B6SEH8 477 aa15.75■□□□□ 0.11
CPNE1-201ENST00000317677 REC8O95072 547 aa15.75■□□□□ 0.11
CPNE1-201ENST00000317677 TNNI3KQ59H18 835 aa15.75■□□□□ 0.11
CPNE1-201ENST00000317677 FPGT-TNNI3KV9GXZ4 949 aa15.75■□□□□ 0.11
CPNE1-201ENST00000317677 LRRC24Q50LG9 513 aa15.74■□□□□ 0.11
CPNE1-201ENST00000317677 ZNF34Q8IZ26 560 aa15.74■□□□□ 0.11
CPNE1-201ENST00000317677 CNTROBQ8N137 903 aa15.74■□□□□ 0.11
CPNE1-201ENST00000317677 FAM13BQ9NYF5 915 aa15.74■□□□□ 0.11
CPNE1-201ENST00000317677 CDHR2Q9BYE9 1310 aa15.74■□□□□ 0.11
CPNE1-201ENST00000317677 PUS3Q9BZE2 481 aaKnown RBP15.73■□□□□ 0.11
CPNE1-201ENST00000317677 LRP5O75197 1615 aa15.73■□□□□ 0.11
CPNE1-201ENST00000317677 KIF20AO95235 890 aa15.73■□□□□ 0.11
CPNE1-201ENST00000317677 CSF1RP07333 972 aa15.73■□□□□ 0.11
CPNE1-201ENST00000317677 KCNQ4P56696 695 aa15.73■□□□□ 0.11
CPNE1-201ENST00000317677 HSP90AB3PQ58FF7 597 aa15.73■□□□□ 0.11
CPNE1-201ENST00000317677 GAS2L3Q86XJ1 694 aa15.73■□□□□ 0.11
CPNE1-201ENST00000317677 LINC00116Q8NCU8 138 aa15.73■□□□□ 0.11
CPNE1-201ENST00000317677 SMARCC1Q92922 1105 aaPredicted RBP15.73■□□□□ 0.11
CPNE1-201ENST00000317677 CAMTA2O94983 1202 aa15.72■□□□□ 0.11
CPNE1-201ENST00000317677 MSNP26038 577 aaKnown RBP15.72■□□□□ 0.11
CPNE1-201ENST00000317677 DDIT3P35638 169 aa15.72■□□□□ 0.11
CPNE1-201ENST00000317677 SPRYD3Q8NCJ5 442 aa15.72■□□□□ 0.11
CPNE1-201ENST00000317677 GPATCH3Q96I76 525 aa15.72■□□□□ 0.11
CPNE1-201ENST00000317677 DBNDD2Q9BQY9 259 aa15.72■□□□□ 0.11
CPNE1-201ENST00000317677 GTPBP4Q9BZE4 634 aaKnown RBP15.72■□□□□ 0.11
CPNE1-201ENST00000317677 PALD1Q9ULE6 856 aa15.72■□□□□ 0.11
CPNE1-201ENST00000317677 DDX60Q8IY21 1712 aaKnown RBP15.72■□□□□ 0.11
CPNE1-201ENST00000317677 SGSM2O43147 1006 aa15.71■□□□□ 0.11
CPNE1-201ENST00000317677 HSCBQ8IWL3 235 aa15.71■□□□□ 0.11
CPNE1-201ENST00000317677 CCDC85AQ96PX6 553 aaPredicted RBP15.71■□□□□ 0.11
CPNE1-201ENST00000317677 EYA2O00167 538 aa15.71■□□□□ 0.1
CPNE1-201ENST00000317677 BBXQ8WY36 941 aaPredicted RBP15.71■□□□□ 0.1
CPNE1-201ENST00000317677 CCDC94Q9BW85 323 aaPredicted RBP15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms