RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 MBD3O95983 291 aa12.44□□□□□ -0.42
SYNPO2-201ENST00000307142 SLC9C2Q5TAH2 1124 aa12.44□□□□□ -0.42
SYNPO2-201ENST00000307142 PARP10Q53GL7 1025 aa12.44□□□□□ -0.42
SYNPO2-201ENST00000307142 NIM1KQ8IY84 436 aa12.44□□□□□ -0.42
SYNPO2-201ENST00000307142 MIGA1Q8NAN2 632 aa12.44□□□□□ -0.42
SYNPO2-201ENST00000307142 PA2G4Q9UQ80 394 aaKnown RBP12.44□□□□□ -0.42
SYNPO2-201ENST00000307142 SSR1P43307 286 aaKnown RBP12.43□□□□□ -0.42
SYNPO2-201ENST00000307142 PIK3C2GO75747 1445 aa12.43□□□□□ -0.42
SYNPO2-201ENST00000307142 LARP6Q9BRS8 491 aaKnown RBP12.43□□□□□ -0.42
SYNPO2-201ENST00000307142 UPF3BQ9BZI7 483 aaKnown RBP12.43□□□□□ -0.42
SYNPO2-201ENST00000307142 KRT23Q9C075 422 aa12.43□□□□□ -0.42
SYNPO2-201ENST00000307142 ALDH1B1P30837 517 aa12.43□□□□□ -0.42
SYNPO2-201ENST00000307142 METAP2P50579 478 aaKnown RBP eCLIP12.43□□□□□ -0.42
SYNPO2-201ENST00000307142 WTAPQ15007 396 aa12.43□□□□□ -0.42
SYNPO2-201ENST00000307142 SUPT20HQ8NEM7 779 aa12.43□□□□□ -0.42
SYNPO2-201ENST00000307142 PHAXQ9H814 394 aaKnown RBP12.43□□□□□ -0.42
SYNPO2-201ENST00000307142 MCM9Q9NXL9 1143 aa12.43□□□□□ -0.42
SYNPO2-201ENST00000307142 PRKG1Q13976 671 aa12.43□□□□□ -0.42
SYNPO2-201ENST00000307142 PUS7Q96PZ0 661 aaKnown RBP12.43□□□□□ -0.42
SYNPO2-201ENST00000307142 BICC1Q9H694 974 aaKnown RBP12.43□□□□□ -0.42
SYNPO2-201ENST00000307142 LUC7LQ9NQ29 371 aaKnown RBP12.43□□□□□ -0.42
SYNPO2-201ENST00000307142 MYO6Q9UM54 1294 aa12.43□□□□□ -0.42
SYNPO2-201ENST00000307142 GSE1Q14687 1217 aa12.43□□□□□ -0.42
SYNPO2-201ENST00000307142 RHPN1Q8TCX5 695 aa12.43□□□□□ -0.42
SYNPO2-201ENST00000307142 TSG101Q99816 390 aa12.43□□□□□ -0.42
SYNPO2-201ENST00000307142 SAP30BPQ9UHR5 308 aaKnown RBP12.43□□□□□ -0.42
SYNPO2-201ENST00000307142 ABCA8O94911 1581 aa12.43□□□□□ -0.42
SYNPO2-201ENST00000307142 POTEJP0CG39 1038 aa12.43□□□□□ -0.42
SYNPO2-201ENST00000307142 PDE6BP35913 854 aa12.43□□□□□ -0.42
SYNPO2-201ENST00000307142 CCDC178Q5BJE1 867 aa12.43□□□□□ -0.42
SYNPO2-201ENST00000307142 DNAJC5Q9H3Z4 198 aa12.43□□□□□ -0.42
SYNPO2-201ENST00000307142 A1BGP04217 495 aa12.42□□□□□ -0.42
SYNPO2-201ENST00000307142 SAMD9LQ8IVG5 1584 aa12.42□□□□□ -0.42
SYNPO2-201ENST00000307142 ZFYP08048 801 aaPredicted RBP12.42□□□□□ -0.42
SYNPO2-201ENST00000307142 RAB3GAP1Q15042 981 aa12.42□□□□□ -0.42
SYNPO2-201ENST00000307142 SLC26A6Q9BXS9 759 aa12.42□□□□□ -0.42
SYNPO2-201ENST00000307142 ZNF335Q9H4Z2 1342 aaPredicted RBP12.42□□□□□ -0.42
SYNPO2-201ENST00000307142 FLAD1Q8NFF5 587 aa12.42□□□□□ -0.42
SYNPO2-201ENST00000307142 SHROOM2Q13796 1616 aa12.42□□□□□ -0.42
SYNPO2-201ENST00000307142 DPY19L2Q6NUT2 758 aa12.42□□□□□ -0.42
SYNPO2-201ENST00000307142 PLXNC1O60486 1568 aa12.42□□□□□ -0.42
SYNPO2-201ENST00000307142 ITGA6P23229 1130 aa12.42□□□□□ -0.42
SYNPO2-201ENST00000307142 HEATR3Q7Z4Q2 680 aa12.42□□□□□ -0.42
SYNPO2-201ENST00000307142 ESR2Q92731 530 aa12.42□□□□□ -0.42
SYNPO2-201ENST00000307142 PHACTR3Q96KR7 559 aa12.42□□□□□ -0.42
SYNPO2-201ENST00000307142 TMOD4Q9NZQ9 345 aa12.42□□□□□ -0.42
SYNPO2-201ENST00000307142 PAG1Q9NWQ8 432 aa12.41□□□□□ -0.42
SYNPO2-201ENST00000307142 ARHGEF5Q12774 1597 aa12.41□□□□□ -0.42
SYNPO2-201ENST00000307142 LGR6Q9HBX8 967 aa12.41□□□□□ -0.42
SYNPO2-201ENST00000307142 PREX2Q70Z35 1606 aa12.41□□□□□ -0.42
SYNPO2-201ENST00000307142 KRT24Q2M2I5 525 aa12.41□□□□□ -0.42
SYNPO2-201ENST00000307142 LINS1Q8NG48 757 aa12.41□□□□□ -0.42
SYNPO2-201ENST00000307142 PLBD2Q8NHP8 589 aa12.41□□□□□ -0.42
SYNPO2-201ENST00000307142 CALML4Q96GE6 196 aa12.41□□□□□ -0.42
SYNPO2-201ENST00000307142 USP16Q9Y5T5 823 aa12.41□□□□□ -0.42
SYNPO2-201ENST00000307142 B4DLN1 442 aa12.41□□□□□ -0.42
SYNPO2-201ENST00000307142 CCDC192P0DO97 292 aa12.41□□□□□ -0.42
SYNPO2-201ENST00000307142 MRPL12P52815 198 aaKnown RBP12.41□□□□□ -0.42
SYNPO2-201ENST00000307142 KRT27Q7Z3Y8 459 aa12.41□□□□□ -0.42
SYNPO2-201ENST00000307142 MRPL50Q8N5N7 158 aaKnown RBP12.41□□□□□ -0.42
SYNPO2-201ENST00000307142 MNS1Q8NEH6 495 aa12.41□□□□□ -0.42
SYNPO2-201ENST00000307142 CARD14Q9BXL6 1004 aa12.41□□□□□ -0.42
SYNPO2-201ENST00000307142 IARSP41252 1262 aaKnown RBP12.4□□□□□ -0.42
SYNPO2-201ENST00000307142 TFCP2Q12800 502 aa12.4□□□□□ -0.42
SYNPO2-201ENST00000307142 NLRP1Q9C000 1473 aa12.4□□□□□ -0.42
SYNPO2-201ENST00000307142 MCM5P33992 734 aa12.4□□□□□ -0.42
SYNPO2-201ENST00000307142 FERMT3Q86UX7 667 aa12.4□□□□□ -0.42
SYNPO2-201ENST00000307142 PDE8AO60658 829 aa12.4□□□□□ -0.42
SYNPO2-201ENST00000307142 BICD1Q96G01 975 aa12.4□□□□□ -0.42
SYNPO2-201ENST00000307142 RSPH6AQ9H0K4 717 aa12.4□□□□□ -0.42
SYNPO2-201ENST00000307142 PPIP5K2O43314 1243 aa12.4□□□□□ -0.42
SYNPO2-201ENST00000307142 FAM196AQ6ZSG2 479 aa12.4□□□□□ -0.42
SYNPO2-201ENST00000307142 SPC24Q8NBT2 197 aa12.4□□□□□ -0.42
SYNPO2-201ENST00000307142 NEK1Q96PY6 1258 aa12.4□□□□□ -0.42
SYNPO2-201ENST00000307142 SYCP3Q8IZU3 236 aa12.4□□□□□ -0.42
SYNPO2-201ENST00000307142 DENND2AQ9ULE3 1009 aa12.4□□□□□ -0.42
SYNPO2-201ENST00000307142 SH3TC1Q8TE82 1336 aa12.4□□□□□ -0.42
SYNPO2-201ENST00000307142 H7C1D1 291 aa12.4□□□□□ -0.43
SYNPO2-201ENST00000307142 SKIDA1Q1XH10 827 aa12.4□□□□□ -0.43
SYNPO2-201ENST00000307142 CNNM2Q9H8M5 875 aa12.4□□□□□ -0.43
SYNPO2-201ENST00000307142 HIBADHP31937 336 aaKnown RBP12.39□□□□□ -0.43
SYNPO2-201ENST00000307142 TRAF1Q13077 416 aa12.39□□□□□ -0.43
SYNPO2-201ENST00000307142 FAM182BQ5T319 152 aa12.39□□□□□ -0.43
SYNPO2-201ENST00000307142 EIF5P55010 431 aaKnown RBP12.39□□□□□ -0.43
SYNPO2-201ENST00000307142 DNAJC10Q8IXB1 793 aa12.39□□□□□ -0.43
SYNPO2-201ENST00000307142 SMARCC2Q8TAQ2 1214 aa12.39□□□□□ -0.43
SYNPO2-201ENST00000307142 TCP11L1Q9NUJ3 509 aa12.39□□□□□ -0.43
SYNPO2-201ENST00000307142 PZPP20742 1482 aa12.39□□□□□ -0.43
SYNPO2-201ENST00000307142 MAGI2Q86UL8 1455 aa12.39□□□□□ -0.43
SYNPO2-201ENST00000307142 PPFIA3O75145 1194 aa12.39□□□□□ -0.43
SYNPO2-201ENST00000307142 MAP3K9P80192 1104 aa12.39□□□□□ -0.43
SYNPO2-201ENST00000307142 TCIRG1Q13488 830 aa12.39□□□□□ -0.43
SYNPO2-201ENST00000307142 TRAK2O60296 914 aa12.39□□□□□ -0.43
SYNPO2-201ENST00000307142 NASPP49321 788 aaPredicted RBP12.39□□□□□ -0.43
SYNPO2-201ENST00000307142 NFKBIBQ15653 356 aa12.39□□□□□ -0.43
SYNPO2-201ENST00000307142 MCMDC2Q4G0Z9 681 aa12.39□□□□□ -0.43
SYNPO2-201ENST00000307142 DDX21Q9NR30 783 aaKnown RBP eCLIP12.39□□□□□ -0.43
SYNPO2-201ENST00000307142 SH2B1Q9NRF2 756 aaPredicted RBP12.39□□□□□ -0.43
SYNPO2-201ENST00000307142 PLEKHG1Q9ULL1 1385 aa12.39□□□□□ -0.43
SYNPO2-201ENST00000307142 ARHGEF12Q9NZN5 1544 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms