RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 MSNP26038 577 aaKnown RBP26.33■■□□□ 1.81
TPM4-201ENST00000300933 CCDC129Q6ZRS4 1044 aa26.33■■□□□ 1.81
TPM4-201ENST00000300933 RBM10P98175 930 aaKnown RBP26.32■■□□□ 1.8
TPM4-201ENST00000300933 TTC14Q96N46 770 aa26.32■■□□□ 1.8
TPM4-201ENST00000300933 HLFQ16534 295 aa26.32■■□□□ 1.8
TPM4-201ENST00000300933 CCDC191Q8NCU4 936 aa26.32■■□□□ 1.8
TPM4-201ENST00000300933 TOGARAM1Q9Y4F4 1720 aa26.32■■□□□ 1.8
TPM4-201ENST00000300933 PPP1R9BQ96SB3 815 aa26.32■■□□□ 1.8
TPM4-201ENST00000300933 LAMB4A4D0S4 1761 aa26.31■■□□□ 1.8
TPM4-201ENST00000300933 NECTIN1Q15223 517 aa26.31■■□□□ 1.8
TPM4-201ENST00000300933 CLEC17AQ6ZS10 378 aa26.31■■□□□ 1.8
TPM4-201ENST00000300933 NUTM2BA6NNL0 878 aaPredicted RBP26.3■■□□□ 1.8
TPM4-201ENST00000300933 NUTM2EB1AL46 878 aaPredicted RBP26.3■■□□□ 1.8
TPM4-201ENST00000300933 CREB3L3Q68CJ9 461 aa26.3■■□□□ 1.8
TPM4-201ENST00000300933 NUTM2AQ8IVF1 878 aaPredicted RBP26.3■■□□□ 1.8
TPM4-201ENST00000300933 IL17RAQ96F46 866 aa26.3■■□□□ 1.8
TPM4-201ENST00000300933 PDCL3Q9H2J4 239 aa26.3■■□□□ 1.8
TPM4-201ENST00000300933 EXOC5O00471 708 aa26.3■■□□□ 1.8
TPM4-201ENST00000300933 PRIM1P49642 420 aaKnown RBP26.3■■□□□ 1.8
TPM4-201ENST00000300933 TPRNQ4KMQ1 711 aa26.3■■□□□ 1.8
TPM4-201ENST00000300933 LMBRD1Q9NUN5 540 aa26.3■■□□□ 1.8
TPM4-201ENST00000300933 TNS2Q63HR2 1409 aa26.3■■□□□ 1.8
TPM4-201ENST00000300933 NHSL1Q5SYE7 1610 aa26.29■■□□□ 1.8
TPM4-201ENST00000300933 UBR2Q8IWV8 1755 aa26.29■■□□□ 1.8
TPM4-201ENST00000300933 ATP5JP18859 108 aa26.29■■□□□ 1.8
TPM4-201ENST00000300933 TCIRG1Q13488 830 aa26.29■■□□□ 1.8
TPM4-201ENST00000300933 KLHL40Q2TBA0 621 aa26.29■■□□□ 1.8
TPM4-201ENST00000300933 MAP4K1Q92918 833 aa26.28■■□□□ 1.8
TPM4-201ENST00000300933 CAVIN1Q6NZI2 390 aaKnown RBP26.28■■□□□ 1.8
TPM4-201ENST00000300933 ACSBG1Q96GR2 724 aa26.28■■□□□ 1.8
TPM4-201ENST00000300933 EPB41L2O43491 1005 aaKnown RBP26.27■■□□□ 1.8
TPM4-201ENST00000300933 PDRG1Q9NUG6 133 aa26.27■■□□□ 1.8
TPM4-201ENST00000300933 STARD3NLO95772 234 aa26.27■■□□□ 1.8
TPM4-201ENST00000300933 ISCA1Q9BUE6 129 aa26.27■■□□□ 1.8
TPM4-201ENST00000300933 GDPD2Q9HCC8 539 aa26.27■■□□□ 1.8
TPM4-201ENST00000300933 TBC1D2BQ9UPU7 963 aa26.27■■□□□ 1.8
TPM4-201ENST00000300933 GOLIM4O00461 696 aa26.26■■□□□ 1.79
TPM4-201ENST00000300933 SLC27A2O14975 620 aa26.26■■□□□ 1.79
TPM4-201ENST00000300933 KIF6Q6ZMV9 814 aa26.26■■□□□ 1.79
TPM4-201ENST00000300933 ZBTB1Q9Y2K1 713 aa26.26■■□□□ 1.79
TPM4-201ENST00000300933 OFD1O75665 1012 aa26.26■■□□□ 1.79
TPM4-201ENST00000300933 LIMCH1Q9UPQ0 1083 aa26.26■■□□□ 1.79
TPM4-201ENST00000300933 COL15A1P39059 1388 aa26.25■■□□□ 1.79
TPM4-201ENST00000300933 CCDC83Q8IWF9 413 aa26.25■■□□□ 1.79
TPM4-201ENST00000300933 NECAB1Q8N987 351 aa26.25■■□□□ 1.79
TPM4-201ENST00000300933 RBM27Q9P2N5 1060 aaKnown RBP26.25■■□□□ 1.79
TPM4-201ENST00000300933 NSFL1CQ9UNZ2 370 aaKnown RBP26.25■■□□□ 1.79
TPM4-201ENST00000300933 BRD1O95696 1058 aa26.25■■□□□ 1.79
TPM4-201ENST00000300933 ZKSCAN1P17029 563 aaPredicted RBP26.25■■□□□ 1.79
TPM4-201ENST00000300933 INTS4Q96HW7 963 aaKnown RBP26.25■■□□□ 1.79
TPM4-201ENST00000300933 HIP1O00291 1037 aa26.24■■□□□ 1.79
TPM4-201ENST00000300933 R3HCC1Q9Y3T6 440 aaKnown RBP26.24■■□□□ 1.79
TPM4-201ENST00000300933 CYP46A1Q9Y6A2 500 aa26.24■■□□□ 1.79
TPM4-201ENST00000300933 EYA2O00167 538 aa26.24■■□□□ 1.79
TPM4-201ENST00000300933 PIP4K2BP78356 416 aa26.24■■□□□ 1.79
TPM4-201ENST00000300933 CCDC57Q2TAC2 916 aa26.23■■□□□ 1.79
TPM4-201ENST00000300933 SNRKQ9NRH2 765 aa26.23■■□□□ 1.79
TPM4-201ENST00000300933 GPT2Q8TD30 523 aa26.22■■□□□ 1.79
TPM4-201ENST00000300933 HAUS7Q99871 368 aa26.22■■□□□ 1.79
TPM4-201ENST00000300933 ZSWIM6Q9HCJ5 1215 aa26.22■■□□□ 1.79
TPM4-201ENST00000300933 A0A1B0GUL7 405 aa26.22■■□□□ 1.79
TPM4-201ENST00000300933 FAM177BA6PVY3 158 aa26.22■■□□□ 1.79
TPM4-201ENST00000300933 TAF5LO75529 589 aa26.22■■□□□ 1.79
TPM4-201ENST00000300933 NUP188Q5SRE5 1749 aa26.22■■□□□ 1.79
TPM4-201ENST00000300933 CYP19A1P11511 503 aaPredicted RBP26.22■■□□□ 1.79
TPM4-201ENST00000300933 FAM13BQ9NYF5 915 aa26.22■■□□□ 1.79
TPM4-201ENST00000300933 ROBO1Q9Y6N7 1651 aa26.21■■□□□ 1.79
TPM4-201ENST00000300933 IL15P40933 162 aaPredicted RBP26.21■■□□□ 1.79
TPM4-201ENST00000300933 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.21■■□□□ 1.79
TPM4-201ENST00000300933 PAPPAQ13219 1627 aa26.21■■□□□ 1.79
TPM4-201ENST00000300933 ADORA1P30542 326 aa26.21■■□□□ 1.79
TPM4-201ENST00000300933 ZSCAN23Q3MJ62 389 aa26.21■■□□□ 1.79
TPM4-201ENST00000300933 MED23Q9ULK4 1368 aa26.2■■□□□ 1.78
TPM4-201ENST00000300933 ZNF609O15014 1411 aa26.2■■□□□ 1.78
TPM4-201ENST00000300933 ME3Q16798 604 aa26.2■■□□□ 1.78
TPM4-201ENST00000300933 TAF7LQ5H9L4 462 aa26.2■■□□□ 1.78
TPM4-201ENST00000300933 TEX13AQ9BXU3 409 aaPredicted RBP26.2■■□□□ 1.78
TPM4-201ENST00000300933 TJP1Q07157 1748 aa26.19■■□□□ 1.78
TPM4-201ENST00000300933 RBSNQ9H1K0 784 aa26.19■■□□□ 1.78
TPM4-201ENST00000300933 MAP3K15Q6ZN16 1313 aa26.19■■□□□ 1.78
TPM4-201ENST00000300933 FKBP4Q02790 459 aaKnown RBP eCLIP26.19■■□□□ 1.78
TPM4-201ENST00000300933 TPCN1Q9ULQ1 816 aa26.19■■□□□ 1.78
TPM4-201ENST00000300933 BCL9O00512 1426 aa26.18■■□□□ 1.78
TPM4-201ENST00000300933 VPS53Q5VIR6 699 aa26.18■■□□□ 1.78
TPM4-201ENST00000300933 GIGYF2Q6Y7W6 1299 aaKnown RBP26.18■■□□□ 1.78
TPM4-201ENST00000300933 CEP126Q9P2H0 1117 aa26.18■■□□□ 1.78
TPM4-201ENST00000300933 ITGB4P16144 1822 aa26.18■■□□□ 1.78
TPM4-201ENST00000300933 KCNB2Q92953 911 aa26.18■■□□□ 1.78
TPM4-201ENST00000300933 PAG1Q9NWQ8 432 aa26.18■■□□□ 1.78
TPM4-201ENST00000300933 DISP2A7MBM2 1401 aa26.17■■□□□ 1.78
TPM4-201ENST00000300933 ST3GAL1Q11201 340 aa26.17■■□□□ 1.78
TPM4-201ENST00000300933 ARID3AQ99856 593 aa26.17■■□□□ 1.78
TPM4-201ENST00000300933 SMC3Q9UQE7 1217 aa26.17■■□□□ 1.78
TPM4-201ENST00000300933 STK3Q13188 491 aa26.17■■□□□ 1.78
TPM4-201ENST00000300933 NLRP10Q86W26 655 aa26.17■■□□□ 1.78
TPM4-201ENST00000300933 A0A0G2JLW4 131 aa26.16■■□□□ 1.78
TPM4-201ENST00000300933 IFIT1P09914 478 aaKnown RBP26.16■■□□□ 1.78
TPM4-201ENST00000300933 ZBTB38Q8NAP3 1195 aaPredicted RBP26.16■■□□□ 1.78
TPM4-201ENST00000300933 GREM2Q9H772 168 aa26.16■■□□□ 1.78
TPM4-201ENST00000300933 RPAP1Q9BWH6 1393 aaPredicted RBP26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms