RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 ANTXR1Q9H6X2 564 aa25.62■■□□□ 1.69
YBX3-202ENST00000279550 BCL2L12Q9HB09 334 aa25.62■■□□□ 1.69
YBX3-202ENST00000279550 C4AP0C0L4 1744 aa25.62■■□□□ 1.69
YBX3-202ENST00000279550 MAP4K4O95819 1239 aaPredicted RBP25.61■■□□□ 1.69
YBX3-202ENST00000279550 CHMLP26374 656 aa25.61■■□□□ 1.69
YBX3-202ENST00000279550 RABL6Q3YEC7 729 aaPredicted RBP25.61■■□□□ 1.69
YBX3-202ENST00000279550 PARP10Q53GL7 1025 aa25.61■■□□□ 1.69
YBX3-202ENST00000279550 SNX21Q969T3 373 aa25.61■■□□□ 1.69
YBX3-202ENST00000279550 RFX5P48382 616 aaPredicted RBP25.6■■□□□ 1.69
YBX3-202ENST00000279550 ESYT1Q9BSJ8 1104 aa25.6■■□□□ 1.69
YBX3-202ENST00000279550 SIL1Q9H173 461 aa25.6■■□□□ 1.69
YBX3-202ENST00000279550 TRMT112Q9UI30 125 aaKnown RBP25.6■■□□□ 1.69
YBX3-202ENST00000279550 G3BP1Q13283 466 aaKnown RBP eCLIP25.6■■□□□ 1.69
YBX3-202ENST00000279550 HSCBQ8IWL3 235 aa25.6■■□□□ 1.69
YBX3-202ENST00000279550 FOXO4P98177 505 aa25.59■■□□□ 1.69
YBX3-202ENST00000279550 EN1Q05925 392 aaPredicted RBP25.59■■□□□ 1.69
YBX3-202ENST00000279550 SUSD4Q5VX71 490 aa25.59■■□□□ 1.69
YBX3-202ENST00000279550 CLASRPQ8N2M8 674 aaKnown RBP25.59■■□□□ 1.69
YBX3-202ENST00000279550 SPRYD3Q8NCJ5 442 aa25.59■■□□□ 1.69
YBX3-202ENST00000279550 CAMKK2Q96RR4 588 aa25.59■■□□□ 1.69
YBX3-202ENST00000279550 CDHR2Q9BYE9 1310 aa25.58■■□□□ 1.69
YBX3-202ENST00000279550 CD2BP2O95400 341 aaKnown RBP25.58■■□□□ 1.69
YBX3-202ENST00000279550 SF3B2Q13435 895 aaKnown RBP25.58■■□□□ 1.69
YBX3-202ENST00000279550 ZNF827Q17R98 1081 aa25.58■■□□□ 1.69
YBX3-202ENST00000279550 AKT1S1Q96B36 256 aa25.58■■□□□ 1.69
YBX3-202ENST00000279550 EZH2Q15910 746 aaKnown RBP25.57■■□□□ 1.68
YBX3-202ENST00000279550 SYNE4Q8N205 404 aa25.57■■□□□ 1.68
YBX3-202ENST00000279550 REC8O95072 547 aa25.57■■□□□ 1.68
YBX3-202ENST00000279550 TBC1D9BQ66K14 1250 aa25.57■■□□□ 1.68
YBX3-202ENST00000279550 LMBR1LQ6UX01 489 aa25.57■■□□□ 1.68
YBX3-202ENST00000279550 AACSQ86V21 672 aa25.57■■□□□ 1.68
YBX3-202ENST00000279550 UTP14AQ9BVJ6 771 aaKnown RBP25.57■■□□□ 1.68
YBX3-202ENST00000279550 PLA2G12BQ9BX93 195 aa25.57■■□□□ 1.68
YBX3-202ENST00000279550 TFCP2L1Q9NZI6 479 aa25.57■■□□□ 1.68
YBX3-202ENST00000279550 TTC41PQ6P2S7 1318 aa25.56■■□□□ 1.68
YBX3-202ENST00000279550 AK9Q5TCS8 1911 aa25.56■■□□□ 1.68
YBX3-202ENST00000279550 NFKBIBQ15653 356 aa25.55■■□□□ 1.68
YBX3-202ENST00000279550 EAF2Q96CJ1 260 aaPredicted RBP25.55■■□□□ 1.68
YBX3-202ENST00000279550 COPRSQ9NQ92 184 aa25.55■■□□□ 1.68
YBX3-202ENST00000279550 SH3TC1Q8TE82 1336 aa25.55■■□□□ 1.68
YBX3-202ENST00000279550 FAM177BA6PVY3 158 aa25.54■■□□□ 1.68
YBX3-202ENST00000279550 NTSR2O95665 410 aa25.54■■□□□ 1.68
YBX3-202ENST00000279550 IFIT2P09913 472 aaKnown RBP25.54■■□□□ 1.68
YBX3-202ENST00000279550 BAG6P46379 1132 aa25.54■■□□□ 1.68
YBX3-202ENST00000279550 PTPN12Q05209 780 aaKnown RBP25.54■■□□□ 1.68
YBX3-202ENST00000279550 IRS4O14654 1257 aaPredicted RBP25.54■■□□□ 1.68
YBX3-202ENST00000279550 BICDL1Q6ZP65 573 aa25.54■■□□□ 1.68
YBX3-202ENST00000279550 ECHDC1Q9NTX5 307 aa25.54■■□□□ 1.68
YBX3-202ENST00000279550 TLR7Q9NYK1 1049 aaKnown RBP25.54■■□□□ 1.68
YBX3-202ENST00000279550 SETDB2Q96T68 719 aa25.53■■□□□ 1.68
YBX3-202ENST00000279550 IL25Q9H293 177 aa25.53■■□□□ 1.68
YBX3-202ENST00000279550 GLRX3O76003 335 aaKnown RBP25.52■■□□□ 1.68
YBX3-202ENST00000279550 CCDC8Q9H0W5 538 aaPredicted RBP25.52■■□□□ 1.68
YBX3-202ENST00000279550 CHMP3Q9Y3E7 222 aa25.51■■□□□ 1.68
YBX3-202ENST00000279550 RABEP1Q15276 862 aa25.51■■□□□ 1.67
YBX3-202ENST00000279550 PDE8AO60658 829 aa25.5■■□□□ 1.67
YBX3-202ENST00000279550 GYS1P13807 737 aa25.5■■□□□ 1.67
YBX3-202ENST00000279550 DEFB132Q7Z7B7 95 aa25.5■■□□□ 1.67
YBX3-202ENST00000279550 CNTROBQ8N137 903 aa25.5■■□□□ 1.67
YBX3-202ENST00000279550 CSF1RP07333 972 aa25.49■■□□□ 1.67
YBX3-202ENST00000279550 CTSWP56202 376 aa25.49■■□□□ 1.67
YBX3-202ENST00000279550 GPATCH3Q96I76 525 aa25.49■■□□□ 1.67
YBX3-202ENST00000279550 COL24A1Q17RW2 1714 aa25.49■■□□□ 1.67
YBX3-202ENST00000279550 FLAD1Q8NFF5 587 aa25.49■■□□□ 1.67
YBX3-202ENST00000279550 TFCP2Q12800 502 aa25.48■■□□□ 1.67
YBX3-202ENST00000279550 CCDC125Q86Z20 511 aa25.48■■□□□ 1.67
YBX3-202ENST00000279550 TTLL11Q8NHH1 800 aa25.48■■□□□ 1.67
YBX3-202ENST00000279550 NYXQ9GZU5 481 aa25.48■■□□□ 1.67
YBX3-202ENST00000279550 HCLS1P14317 486 aaPredicted RBP25.47■■□□□ 1.67
YBX3-202ENST00000279550 HSP90B1P14625 803 aaKnown RBP25.47■■□□□ 1.67
YBX3-202ENST00000279550 COL23A1Q86Y22 540 aaPredicted RBP25.47■■□□□ 1.67
YBX3-202ENST00000279550 ANO8Q9HCE9 1232 aaPredicted RBP25.47■■□□□ 1.67
YBX3-202ENST00000279550 FRAT2O75474 233 aaPredicted RBP25.46■■□□□ 1.67
YBX3-202ENST00000279550 NFIXQ14938 502 aa25.46■■□□□ 1.67
YBX3-202ENST00000279550 ANO2Q9NQ90 1003 aa25.46■■□□□ 1.67
YBX3-202ENST00000279550 CARMIL3Q8ND23 1372 aa25.46■■□□□ 1.67
YBX3-202ENST00000279550 K7ELQ4 463 aaPredicted RBP25.46■■□□□ 1.67
YBX3-202ENST00000279550 NBPF5PQ86XG9 351 aaPredicted RBP25.46■■□□□ 1.67
YBX3-202ENST00000279550 CCDC57Q2TAC2 916 aa25.45■■□□□ 1.66
YBX3-202ENST00000279550 ERFEQ4G0M1 354 aa25.45■■□□□ 1.66
YBX3-202ENST00000279550 PNPLA7Q6ZV29 1317 aa25.45■■□□□ 1.66
YBX3-202ENST00000279550 MYH3P11055 1940 aa25.45■■□□□ 1.66
YBX3-202ENST00000279550 DDX60Q8IY21 1712 aaKnown RBP25.44■■□□□ 1.66
YBX3-202ENST00000279550 SGSM2O43147 1006 aa25.44■■□□□ 1.66
YBX3-202ENST00000279550 DDIT3P35638 169 aa25.44■■□□□ 1.66
YBX3-202ENST00000279550 SLC15A2Q16348 729 aa25.44■■□□□ 1.66
YBX3-202ENST00000279550 CCDC85AQ96PX6 553 aaPredicted RBP25.44■■□□□ 1.66
YBX3-202ENST00000279550 PALD1Q9ULE6 856 aa25.44■■□□□ 1.66
YBX3-202ENST00000279550 LAMB2P55268 1798 aa25.44■■□□□ 1.66
YBX3-202ENST00000279550 GTF2E1P29083 439 aaPredicted RBP25.43■■□□□ 1.66
YBX3-202ENST00000279550 TNNI3KQ59H18 835 aa25.43■■□□□ 1.66
YBX3-202ENST00000279550 TPTE2Q6XPS3 522 aa25.43■■□□□ 1.66
YBX3-202ENST00000279550 GREM2Q9H772 168 aa25.43■■□□□ 1.66
YBX3-202ENST00000279550 FPGT-TNNI3KV9GXZ4 949 aa25.43■■□□□ 1.66
YBX3-202ENST00000279550 IFIT5Q13325 482 aaKnown RBP25.43■■□□□ 1.66
YBX3-202ENST00000279550 ATG9AQ7Z3C6 839 aa25.43■■□□□ 1.66
YBX3-202ENST00000279550 STK32BQ9NY57 414 aa25.43■■□□□ 1.66
YBX3-202ENST00000279550 CHMP5Q9NZZ3 219 aa25.42■■□□□ 1.66
YBX3-202ENST00000279550 DBNLQ9UJU6 430 aaKnown RBP25.42■■□□□ 1.66
YBX3-202ENST00000279550 ITGA6P23229 1130 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms