RNA–Protein interactions for RNA: ENST00000268720.9

CPNE7-201, Transcript of copine 7, humanhuman

TSL 1 (best) BASIC

Gene CPNE7, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-201ENST00000268720 CAMK4Q16566 473 aa22.79■■□□□ 1.24
CPNE7-201ENST00000268720 TOM1L2Q6ZVM7 507 aa22.79■■□□□ 1.24
CPNE7-201ENST00000268720 SEC62Q99442 399 aaKnown RBP22.79■■□□□ 1.24
CPNE7-201ENST00000268720 FSD1Q9BTV5 496 aa22.79■■□□□ 1.24
CPNE7-201ENST00000268720 TFCP2Q12800 502 aa22.79■■□□□ 1.24
CPNE7-201ENST00000268720 TSC1Q92574 1164 aa22.79■■□□□ 1.24
CPNE7-201ENST00000268720 COPRSQ9NQ92 184 aa22.79■■□□□ 1.24
CPNE7-201ENST00000268720 DBNLQ9UJU6 430 aaKnown RBP22.79■■□□□ 1.24
CPNE7-201ENST00000268720 TPCN1Q9ULQ1 816 aa22.79■■□□□ 1.24
CPNE7-201ENST00000268720 FAM177BA6PVY3 158 aa22.78■■□□□ 1.24
CPNE7-201ENST00000268720 ZNF500O60304 480 aaPredicted RBP22.78■■□□□ 1.24
CPNE7-201ENST00000268720 PKD1L3Q7Z443 1732 aa22.78■■□□□ 1.24
CPNE7-201ENST00000268720 TTC12Q9H892 705 aaPredicted RBP22.78■■□□□ 1.24
CPNE7-201ENST00000268720 TTLL7Q6ZT98 887 aa22.77■■□□□ 1.24
CPNE7-201ENST00000268720 MAP4K1Q92918 833 aa22.77■■□□□ 1.24
CPNE7-201ENST00000268720 DNAJC2Q99543 621 aaKnown RBP22.77■■□□□ 1.24
CPNE7-201ENST00000268720 GLI3P10071 1580 aa22.77■■□□□ 1.23
CPNE7-201ENST00000268720 CREB3L3Q68CJ9 461 aa22.76■■□□□ 1.23
CPNE7-201ENST00000268720 ZCRB1Q8TBF4 217 aaKnown RBP22.76■■□□□ 1.23
CPNE7-201ENST00000268720 ZSWIM6Q9HCJ5 1215 aa22.76■■□□□ 1.23
CPNE7-201ENST00000268720 TFIP11Q9UBB9 837 aaKnown RBP22.76■■□□□ 1.23
CPNE7-201ENST00000268720 F13A1P00488 732 aa22.76■■□□□ 1.23
CPNE7-201ENST00000268720 A1BGP04217 495 aa22.76■■□□□ 1.23
CPNE7-201ENST00000268720 CASP7P55210 303 aa22.76■■□□□ 1.23
CPNE7-201ENST00000268720 RABL6Q3YEC7 729 aaPredicted RBP22.76■■□□□ 1.23
CPNE7-201ENST00000268720 CDC37L1Q7L3B6 337 aa22.76■■□□□ 1.23
CPNE7-201ENST00000268720 PLBD2Q8NHP8 589 aa22.76■■□□□ 1.23
CPNE7-201ENST00000268720 DDX11Q96FC9 970 aa22.76■■□□□ 1.23
CPNE7-201ENST00000268720 FAM13BQ9NYF5 915 aa22.76■■□□□ 1.23
CPNE7-201ENST00000268720 CCDC39Q9UFE4 941 aa22.76■■□□□ 1.23
CPNE7-201ENST00000268720 ABCC6O95255 1503 aa22.76■■□□□ 1.23
CPNE7-201ENST00000268720 WDR17Q8IZU2 1322 aa22.76■■□□□ 1.23
CPNE7-201ENST00000268720 KCNB2Q92953 911 aa22.75■■□□□ 1.23
CPNE7-201ENST00000268720 TNNI3KQ59H18 835 aa22.75■■□□□ 1.23
CPNE7-201ENST00000268720 FPGT-TNNI3KV9GXZ4 949 aa22.75■■□□□ 1.23
CPNE7-201ENST00000268720 LMBR1LQ6UX01 489 aa22.75■■□□□ 1.23
CPNE7-201ENST00000268720 SYAP1Q96A49 352 aaPredicted RBP22.75■■□□□ 1.23
CPNE7-201ENST00000268720 CYP46A1Q9Y6A2 500 aa22.75■■□□□ 1.23
CPNE7-201ENST00000268720 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.74■■□□□ 1.23
CPNE7-201ENST00000268720 GLIPR1L2Q4G1C9 344 aa22.74■■□□□ 1.23
CPNE7-201ENST00000268720 VPS53Q5VIR6 699 aa22.74■■□□□ 1.23
CPNE7-201ENST00000268720 DBNDD2Q9BQY9 259 aa22.74■■□□□ 1.23
CPNE7-201ENST00000268720 SLC27A2O14975 620 aa22.73■■□□□ 1.23
CPNE7-201ENST00000268720 ZKSCAN1P17029 563 aaPredicted RBP22.73■■□□□ 1.23
CPNE7-201ENST00000268720 BCL11BQ9C0K0 894 aaPredicted RBP22.73■■□□□ 1.23
CPNE7-201ENST00000268720 MTMR6Q9Y217 621 aa22.73■■□□□ 1.23
CPNE7-201ENST00000268720 ARFGEF2Q9Y6D5 1785 aa22.73■■□□□ 1.23
CPNE7-201ENST00000268720 AFDNP55196 1824 aaKnown RBP22.73■■□□□ 1.23
CPNE7-201ENST00000268720 A0A0G2JLW4 131 aa22.73■■□□□ 1.23
CPNE7-201ENST00000268720 CEBPZQ03701 1054 aaKnown RBP22.73■■□□□ 1.23
CPNE7-201ENST00000268720 SPC24Q8NBT2 197 aa22.73■■□□□ 1.23
CPNE7-201ENST00000268720 PCDH11XQ9BZA7 1347 aa22.72■■□□□ 1.23
CPNE7-201ENST00000268720 PCDH11YQ9BZA8 1340 aa22.72■■□□□ 1.23
CPNE7-201ENST00000268720 UQCRHLA0A096LP55 91 aa22.72■■□□□ 1.23
CPNE7-201ENST00000268720 UQCRHP07919 91 aa22.72■■□□□ 1.23
CPNE7-201ENST00000268720 TM6SF1Q9BZW5 370 aa22.72■■□□□ 1.23
CPNE7-201ENST00000268720 XIRP1Q702N8 1843 aaKnown RBP22.72■■□□□ 1.23
CPNE7-201ENST00000268720 HIP1O00291 1037 aa22.72■■□□□ 1.23
CPNE7-201ENST00000268720 DDX46Q7L014 1031 aaKnown RBP22.72■■□□□ 1.23
CPNE7-201ENST00000268720 CCDC85AQ96PX6 553 aaPredicted RBP22.72■■□□□ 1.23
CPNE7-201ENST00000268720 ZNF330Q9Y3S2 320 aaPredicted RBP22.72■■□□□ 1.23
CPNE7-201ENST00000268720 AP5Z1O43299 807 aa22.71■■□□□ 1.23
CPNE7-201ENST00000268720 ZBTB3Q9H5J0 574 aa22.71■■□□□ 1.23
CPNE7-201ENST00000268720 SNRKQ9NRH2 765 aa22.71■■□□□ 1.23
CPNE7-201ENST00000268720 STRN4Q9NRL3 753 aa22.71■■□□□ 1.23
CPNE7-201ENST00000268720 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.71■■□□□ 1.23
CPNE7-201ENST00000268720 MED23Q9ULK4 1368 aa22.71■■□□□ 1.23
CPNE7-201ENST00000268720 JAK2O60674 1132 aa22.71■■□□□ 1.23
CPNE7-201ENST00000268720 FOXO4P98177 505 aa22.71■■□□□ 1.23
CPNE7-201ENST00000268720 CKAP2LQ8IYA6 745 aa22.71■■□□□ 1.23
CPNE7-201ENST00000268720 COL15A1P39059 1388 aa22.7■■□□□ 1.23
CPNE7-201ENST00000268720 ATP5JP18859 108 aa22.7■■□□□ 1.22
CPNE7-201ENST00000268720 A0A087WWV3 80 aa22.7■■□□□ 1.22
CPNE7-201ENST00000268720 SLAIN2Q9P270 581 aa22.7■■□□□ 1.22
CPNE7-201ENST00000268720 ADCY5O95622 1261 aa22.69■■□□□ 1.22
CPNE7-201ENST00000268720 PLEKHG2Q9H7P9 1386 aa22.69■■□□□ 1.22
CPNE7-201ENST00000268720 COL5A2P05997 1499 aaPredicted RBP22.69■■□□□ 1.22
CPNE7-201ENST00000268720 DNTTIP2Q5QJE6 756 aaKnown RBP22.69■■□□□ 1.22
CPNE7-201ENST00000268720 LARP1BQ659C4 914 aaKnown RBP22.69■■□□□ 1.22
CPNE7-201ENST00000268720 NAP1L2Q9ULW6 460 aaPredicted RBP22.69■■□□□ 1.22
CPNE7-201ENST00000268720 H7C1W4 665 aa22.68■■□□□ 1.22
CPNE7-201ENST00000268720 SOS2Q07890 1332 aaPredicted RBP22.68■■□□□ 1.22
CPNE7-201ENST00000268720 TAF5LO75529 589 aa22.68■■□□□ 1.22
CPNE7-201ENST00000268720 PHF14O94880 888 aa22.67■■□□□ 1.22
CPNE7-201ENST00000268720 CHST3Q7LGC8 479 aa22.67■■□□□ 1.22
CPNE7-201ENST00000268720 IL2RBP14784 551 aa22.67■■□□□ 1.22
CPNE7-201ENST00000268720 LIG1P18858 919 aa22.67■■□□□ 1.22
CPNE7-201ENST00000268720 CCDC183Q5T5S1 534 aa22.67■■□□□ 1.22
CPNE7-201ENST00000268720 ZNF335Q9H4Z2 1342 aaPredicted RBP22.67■■□□□ 1.22
CPNE7-201ENST00000268720 ERVV-2B6SEH9 535 aa22.66■■□□□ 1.22
CPNE7-201ENST00000268720 ATG9AQ7Z3C6 839 aa22.66■■□□□ 1.22
CPNE7-201ENST00000268720 TTC6Q86TZ1 520 aa22.66■■□□□ 1.22
CPNE7-201ENST00000268720 PDCL3Q9H2J4 239 aa22.66■■□□□ 1.22
CPNE7-201ENST00000268720 ZNF594Q96JF6 807 aaPredicted RBP22.66■■□□□ 1.22
CPNE7-201ENST00000268720 TIMM10P62072 90 aa22.65■■□□□ 1.22
CPNE7-201ENST00000268720 FTOQ9C0B1 505 aaKnown RBP eCLIP22.65■■□□□ 1.22
CPNE7-201ENST00000268720 CWC25Q9NXE8 425 aaPredicted RBP22.65■■□□□ 1.22
CPNE7-201ENST00000268720 NEUROD6Q96NK8 337 aa22.65■■□□□ 1.22
CPNE7-201ENST00000268720 LAMB4A4D0S4 1761 aa22.65■■□□□ 1.22
CPNE7-201ENST00000268720 HSP90AB3PQ58FF7 597 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms