RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 CCDC121Q6ZUS5 278 aa5.48□□□□□ -1.53
RC3H1-201ENST00000258349 CCDC40Q4G0X9 1142 aa5.48□□□□□ -1.53
RC3H1-201ENST00000258349 DAAM2Q86T65 1068 aa5.48□□□□□ -1.53
RC3H1-201ENST00000258349 IL1RAPL2Q9NP60 686 aa5.48□□□□□ -1.53
RC3H1-201ENST00000258349 ANKRD12Q6UB98 2062 aa5.48□□□□□ -1.53
RC3H1-201ENST00000258349 GOLGA8AA7E2F4 631 aa5.48□□□□□ -1.53
RC3H1-201ENST00000258349 CLCN1P35523 988 aa5.48□□□□□ -1.53
RC3H1-201ENST00000258349 CYLC1P35663 651 aaPredicted RBP5.48□□□□□ -1.53
RC3H1-201ENST00000258349 METAP2P50579 478 aaKnown RBP eCLIP5.48□□□□□ -1.53
RC3H1-201ENST00000258349 GNG11P61952 73 aa5.48□□□□□ -1.53
RC3H1-201ENST00000258349 ANO6Q4KMQ2 910 aa5.48□□□□□ -1.53
RC3H1-201ENST00000258349 FMNL3Q8IVF7 1028 aa5.48□□□□□ -1.53
RC3H1-201ENST00000258349 ZHX1Q9UKY1 873 aaPredicted RBP5.48□□□□□ -1.53
RC3H1-201ENST00000258349 NOP2P46087 812 aaKnown RBP5.48□□□□□ -1.53
RC3H1-201ENST00000258349 PDE4BQ07343 736 aa5.48□□□□□ -1.53
RC3H1-201ENST00000258349 SPTY2D1Q68D10 685 aaPredicted RBP5.48□□□□□ -1.53
RC3H1-201ENST00000258349 CCDC97Q96F63 343 aaPredicted RBP5.48□□□□□ -1.53
RC3H1-201ENST00000258349 SNX21Q969T3 373 aa5.48□□□□□ -1.53
RC3H1-201ENST00000258349 HOMER2Q9NSB8 354 aa5.48□□□□□ -1.53
RC3H1-201ENST00000258349 MACROD2A1Z1Q3 448 aa5.48□□□□□ -1.53
RC3H1-201ENST00000258349 STAT6P42226 847 aa5.48□□□□□ -1.53
RC3H1-201ENST00000258349 RBM25P49756 843 aaKnown RBP5.48□□□□□ -1.53
RC3H1-201ENST00000258349 KIAA0753Q2KHM9 967 aa5.48□□□□□ -1.53
RC3H1-201ENST00000258349 TMEM67Q5HYA8 995 aa5.48□□□□□ -1.53
RC3H1-201ENST00000258349 SPDYE4A6NLX3 237 aa5.48□□□□□ -1.53
RC3H1-201ENST00000258349 MINDY4BA8MYZ0 360 aa5.48□□□□□ -1.53
RC3H1-201ENST00000258349 ZPR1O75312 459 aa5.48□□□□□ -1.53
RC3H1-201ENST00000258349 MFSD6Q6ZSS7 791 aa5.48□□□□□ -1.53
RC3H1-201ENST00000258349 FAM200AQ8TCP9 573 aa5.48□□□□□ -1.53
RC3H1-201ENST00000258349 BOLA2Q9H3K6 86 aa5.48□□□□□ -1.53
RC3H1-201ENST00000258349 WDR62O43379 1518 aa5.48□□□□□ -1.53
RC3H1-201ENST00000258349 GRIN2AQ12879 1464 aa5.48□□□□□ -1.53
RC3H1-201ENST00000258349 USP37Q86T82 979 aa5.48□□□□□ -1.53
RC3H1-201ENST00000258349 SYCP3Q8IZU3 236 aa5.48□□□□□ -1.53
RC3H1-201ENST00000258349 KLHL34Q8N239 644 aa5.48□□□□□ -1.53
RC3H1-201ENST00000258349 IFIT3O14879 490 aaKnown RBP5.48□□□□□ -1.53
RC3H1-201ENST00000258349 PRPF4BQ13523 1007 aaKnown RBP5.48□□□□□ -1.53
RC3H1-201ENST00000258349 LMBR1Q8WVP7 490 aa5.48□□□□□ -1.53
RC3H1-201ENST00000258349 DDX23Q9BUQ8 820 aaKnown RBP5.48□□□□□ -1.53
RC3H1-201ENST00000258349 KRT23Q9C075 422 aa5.48□□□□□ -1.53
RC3H1-201ENST00000258349 NLRP5P59047 1200 aa5.47□□□□□ -1.53
RC3H1-201ENST00000258349 B4GALNT4Q76KP1 1039 aa5.47□□□□□ -1.53
RC3H1-201ENST00000258349 RTL1A6NKG5 1358 aa5.47□□□□□ -1.53
RC3H1-201ENST00000258349 SHANK2Q9UPX8 1470 aa5.47□□□□□ -1.53
RC3H1-201ENST00000258349 MPHOSPH6Q99547 160 aaKnown RBP5.47□□□□□ -1.53
RC3H1-201ENST00000258349 ADAMTS12P58397 1594 aa5.47□□□□□ -1.53
RC3H1-201ENST00000258349 RTL9Q8NET4 1388 aa5.47□□□□□ -1.53
RC3H1-201ENST00000258349 DDX46Q7L014 1031 aaKnown RBP5.47□□□□□ -1.53
RC3H1-201ENST00000258349 HDXQ7Z353 690 aa5.47□□□□□ -1.53
RC3H1-201ENST00000258349 ZSCAN29Q8IWY8 852 aaPredicted RBP5.47□□□□□ -1.53
RC3H1-201ENST00000258349 CRACR2BQ8N4Y2 399 aaPredicted RBP5.47□□□□□ -1.53
RC3H1-201ENST00000258349 NCOA7Q8NI08 942 aa5.47□□□□□ -1.53
RC3H1-201ENST00000258349 IQCGQ9H095 443 aaKnown RBP5.47□□□□□ -1.53
RC3H1-201ENST00000258349 CNNM2Q9H8M5 875 aa5.47□□□□□ -1.53
RC3H1-201ENST00000258349 CTAGE15A4D2H0 777 aa5.47□□□□□ -1.53
RC3H1-201ENST00000258349 RANBP6O60518 1105 aaKnown RBP5.47□□□□□ -1.53
RC3H1-201ENST00000258349 CTAGE8P0CG41 777 aa5.47□□□□□ -1.53
RC3H1-201ENST00000258349 SPAG1Q07617 926 aa5.47□□□□□ -1.53
RC3H1-201ENST00000258349 CTAGE6Q86UF2 777 aa5.47□□□□□ -1.53
RC3H1-201ENST00000258349 CTAGE4Q8IX94 777 aa5.47□□□□□ -1.53
RC3H1-201ENST00000258349 ACTN2P35609 894 aa5.47□□□□□ -1.53
RC3H1-201ENST00000258349 RBM27Q9P2N5 1060 aaKnown RBP5.47□□□□□ -1.53
RC3H1-201ENST00000258349 SKILP12757 684 aa5.47□□□□□ -1.53
RC3H1-201ENST00000258349 LIG1P18858 919 aa5.47□□□□□ -1.53
RC3H1-201ENST00000258349 SYT1P21579 422 aa5.47□□□□□ -1.53
RC3H1-201ENST00000258349 VAV2P52735 878 aa5.47□□□□□ -1.53
RC3H1-201ENST00000258349 NOLC1Q14978 699 aaKnown RBP eCLIP5.47□□□□□ -1.53
RC3H1-201ENST00000258349 MCM10Q7L590 875 aa5.47□□□□□ -1.53
RC3H1-201ENST00000258349 WDR66Q8TBY9 1149 aa5.47□□□□□ -1.53
RC3H1-201ENST00000258349 BICDL2A1A5D9 508 aa5.47□□□□□ -1.53
RC3H1-201ENST00000258349 TBCAO75347 108 aaKnown RBP5.47□□□□□ -1.53
RC3H1-201ENST00000258349 DNA2P51530 1060 aa5.47□□□□□ -1.53
RC3H1-201ENST00000258349 CCT2P78371 535 aaKnown RBP5.47□□□□□ -1.53
RC3H1-201ENST00000258349 TRIM47Q96LD4 638 aa5.47□□□□□ -1.53
RC3H1-201ENST00000258349 TMOD3Q9NYL9 352 aa5.47□□□□□ -1.53
RC3H1-201ENST00000258349 MYH1P12882 1939 aa5.47□□□□□ -1.53
RC3H1-201ENST00000258349 MYH2Q9UKX2 1941 aa5.47□□□□□ -1.53
RC3H1-201ENST00000258349 MYH4Q9Y623 1939 aa5.47□□□□□ -1.53
RC3H1-201ENST00000258349 GSTO1P78417 241 aa5.47□□□□□ -1.53
RC3H1-201ENST00000258349 IPO4Q8TEX9 1081 aaKnown RBP5.47□□□□□ -1.53
RC3H1-201ENST00000258349 ECHDC1Q9NTX5 307 aa5.47□□□□□ -1.53
RC3H1-201ENST00000258349 TMCO5BA8MYB1 307 aa5.46□□□□□ -1.53
RC3H1-201ENST00000258349 N4BP3O15049 544 aa5.46□□□□□ -1.53
RC3H1-201ENST00000258349 KRT83P78385 493 aa5.46□□□□□ -1.53
RC3H1-201ENST00000258349 CCDC50Q8IVM0 306 aa5.46□□□□□ -1.53
RC3H1-201ENST00000258349 TMX1Q9H3N1 280 aa5.46□□□□□ -1.53
RC3H1-201ENST00000258349 TACC1O75410 805 aa5.46□□□□□ -1.53
RC3H1-201ENST00000258349 ZNF444Q8N0Y2 327 aaPredicted RBP5.46□□□□□ -1.53
RC3H1-201ENST00000258349 DBF4Q9UBU7 674 aaPredicted RBP5.46□□□□□ -1.53
RC3H1-201ENST00000258349 DCAF8L1A6NGE4 600 aa5.46□□□□□ -1.53
RC3H1-201ENST00000258349 BIN1O00499 593 aa5.46□□□□□ -1.53
RC3H1-201ENST00000258349 ATP5DP30049 168 aa5.46□□□□□ -1.53
RC3H1-201ENST00000258349 C20orf194Q5TEA3 1177 aa5.46□□□□□ -1.53
RC3H1-201ENST00000258349 RSRC1Q96IZ7 334 aaKnown RBP5.46□□□□□ -1.53
RC3H1-201ENST00000258349 CCDC77Q9BR77 488 aa5.46□□□□□ -1.53
RC3H1-201ENST00000258349 ABCF2Q9UG63 623 aa5.46□□□□□ -1.53
RC3H1-201ENST00000258349 A6NNZ2 444 aa5.46□□□□□ -1.54
RC3H1-201ENST00000258349 ATP2A1O14983 1001 aa5.46□□□□□ -1.54
RC3H1-201ENST00000258349 UBA7P41226 1012 aa5.46□□□□□ -1.54
RC3H1-201ENST00000258349 TUBB2AQ13885 445 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms