RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 LMBR1LQ6UX01 489 aa26.57■■□□□ 1.84
CCDC9-201ENST00000221922 TMEM87AQ8NBN3 555 aa26.57■■□□□ 1.84
CCDC9-201ENST00000221922 ATG3Q9NT62 314 aa26.57■■□□□ 1.84
CCDC9-201ENST00000221922 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.57■■□□□ 1.84
CCDC9-201ENST00000221922 NECTIN1Q15223 517 aa26.56■■□□□ 1.84
CCDC9-201ENST00000221922 TNNI3KQ59H18 835 aa26.56■■□□□ 1.84
CCDC9-201ENST00000221922 VPS53Q5VIR6 699 aa26.56■■□□□ 1.84
CCDC9-201ENST00000221922 FPGT-TNNI3KV9GXZ4 949 aa26.56■■□□□ 1.84
CCDC9-201ENST00000221922 ATP5JP18859 108 aa26.56■■□□□ 1.84
CCDC9-201ENST00000221922 CYP46A1Q9Y6A2 500 aa26.56■■□□□ 1.84
CCDC9-201ENST00000221922 TCHHQ07283 1943 aa26.55■■□□□ 1.84
CCDC9-201ENST00000221922 OFD1O75665 1012 aa26.55■■□□□ 1.84
CCDC9-201ENST00000221922 MAP4K1Q92918 833 aa26.55■■□□□ 1.84
CCDC9-201ENST00000221922 ISCA1Q9BUE6 129 aa26.55■■□□□ 1.84
CCDC9-201ENST00000221922 ZSWIM6Q9HCJ5 1215 aa26.55■■□□□ 1.84
CCDC9-201ENST00000221922 RFX7Q2KHR2 1363 aa26.55■■□□□ 1.84
CCDC9-201ENST00000221922 TFCP2Q12800 502 aa26.54■■□□□ 1.84
CCDC9-201ENST00000221922 RUFY3Q7L099 469 aa26.54■■□□□ 1.84
CCDC9-201ENST00000221922 FAM227BQ96M60 508 aa26.54■■□□□ 1.84
CCDC9-201ENST00000221922 JAKMIP1Q96N16 626 aaKnown RBP26.54■■□□□ 1.84
CCDC9-201ENST00000221922 RBM8AQ9Y5S9 174 aaKnown RBP26.54■■□□□ 1.84
CCDC9-201ENST00000221922 STARD3NLO95772 234 aa26.54■■□□□ 1.84
CCDC9-201ENST00000221922 KCNJ4P48050 445 aa26.54■■□□□ 1.84
CCDC9-201ENST00000221922 USP48Q86UV5 1035 aa26.54■■□□□ 1.84
CCDC9-201ENST00000221922 DNAJC10Q8IXB1 793 aa26.54■■□□□ 1.84
CCDC9-201ENST00000221922 ZSCAN31Q96LW9 406 aaPredicted RBP26.54■■□□□ 1.84
CCDC9-201ENST00000221922 NRAPQ86VF7 1730 aa26.53■■□□□ 1.84
CCDC9-201ENST00000221922 PDRG1Q9NUG6 133 aa26.53■■□□□ 1.84
CCDC9-201ENST00000221922 MED23Q9ULK4 1368 aa26.53■■□□□ 1.84
CCDC9-201ENST00000221922 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.53■■□□□ 1.84
CCDC9-201ENST00000221922 TRIM28Q13263 835 aaKnown RBP26.53■■□□□ 1.84
CCDC9-201ENST00000221922 TSPY26PQ9H489 355 aa26.53■■□□□ 1.84
CCDC9-201ENST00000221922 EIF2AK3Q9NZJ5 1116 aaKnown RBP26.53■■□□□ 1.84
CCDC9-201ENST00000221922 DBNLQ9UJU6 430 aaKnown RBP26.53■■□□□ 1.84
CCDC9-201ENST00000221922 ZNF500O60304 480 aaPredicted RBP26.52■■□□□ 1.84
CCDC9-201ENST00000221922 GADD45BO75293 160 aaPredicted RBP26.52■■□□□ 1.84
CCDC9-201ENST00000221922 TCIRG1Q13488 830 aa26.52■■□□□ 1.84
CCDC9-201ENST00000221922 RNF20Q5VTR2 975 aa26.52■■□□□ 1.84
CCDC9-201ENST00000221922 CREB3L3Q68CJ9 461 aa26.52■■□□□ 1.84
CCDC9-201ENST00000221922 SH2B1Q9NRF2 756 aaPredicted RBP26.52■■□□□ 1.84
CCDC9-201ENST00000221922 PHLPP1O60346 1717 aa26.52■■□□□ 1.84
CCDC9-201ENST00000221922 EXOC5O00471 708 aa26.51■■□□□ 1.83
CCDC9-201ENST00000221922 PHF14O94880 888 aa26.51■■□□□ 1.83
CCDC9-201ENST00000221922 TPM2P07951 284 aa26.51■■□□□ 1.83
CCDC9-201ENST00000221922 PSMA5P28066 241 aa26.51■■□□□ 1.83
CCDC9-201ENST00000221922 A0A0D9SFI3 127 aa26.51■■□□□ 1.83
CCDC9-201ENST00000221922 JCADQ9P266 1359 aa26.51■■□□□ 1.83
CCDC9-201ENST00000221922 ZSCAN22P10073 491 aaPredicted RBP26.5■■□□□ 1.83
CCDC9-201ENST00000221922 MCM5P33992 734 aa26.5■■□□□ 1.83
CCDC9-201ENST00000221922 KIF6Q6ZMV9 814 aa26.5■■□□□ 1.83
CCDC9-201ENST00000221922 CDCA7Q9BWT1 371 aaPredicted RBP26.5■■□□□ 1.83
CCDC9-201ENST00000221922 GDPD2Q9HCC8 539 aa26.5■■□□□ 1.83
CCDC9-201ENST00000221922 ADCK5Q3MIX3 580 aa26.49■■□□□ 1.83
CCDC9-201ENST00000221922 GPR108Q9NPR9 543 aa26.49■■□□□ 1.83
CCDC9-201ENST00000221922 SMC3Q9UQE7 1217 aa26.49■■□□□ 1.83
CCDC9-201ENST00000221922 CHMP3Q9Y3E7 222 aa26.49■■□□□ 1.83
CCDC9-201ENST00000221922 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.48■■□□□ 1.83
CCDC9-201ENST00000221922 ATG9AQ7Z3C6 839 aa26.48■■□□□ 1.83
CCDC9-201ENST00000221922 HMG20BQ9P0W2 317 aa26.48■■□□□ 1.83
CCDC9-201ENST00000221922 DOT1LQ8TEK3 1739 aa26.48■■□□□ 1.83
CCDC9-201ENST00000221922 SLC27A2O14975 620 aa26.48■■□□□ 1.83
CCDC9-201ENST00000221922 STX6O43752 255 aa26.48■■□□□ 1.83
CCDC9-201ENST00000221922 ZKSCAN5Q9Y2L8 839 aa26.48■■□□□ 1.83
CCDC9-201ENST00000221922 SYT1P21579 422 aa26.47■■□□□ 1.83
CCDC9-201ENST00000221922 CCDC39Q9UFE4 941 aa26.47■■□□□ 1.83
CCDC9-201ENST00000221922 CPA1P15085 419 aa26.46■■□□□ 1.83
CCDC9-201ENST00000221922 IL15P40933 162 aaPredicted RBP26.46■■□□□ 1.83
CCDC9-201ENST00000221922 FOXD4L6Q3SYB3 417 aaPredicted RBP26.46■■□□□ 1.83
CCDC9-201ENST00000221922 FOXD4L3Q6VB84 417 aaPredicted RBP26.46■■□□□ 1.83
CCDC9-201ENST00000221922 MAP3K15Q6ZN16 1313 aa26.46■■□□□ 1.83
CCDC9-201ENST00000221922 CIAO1O76071 339 aa26.46■■□□□ 1.83
CCDC9-201ENST00000221922 TERF1P54274 439 aa26.46■■□□□ 1.83
CCDC9-201ENST00000221922 HAUS7Q99871 368 aa26.46■■□□□ 1.83
CCDC9-201ENST00000221922 RNF214Q8ND24 703 aa26.45■■□□□ 1.83
CCDC9-201ENST00000221922 DBNDD2Q9BQY9 259 aa26.45■■□□□ 1.83
CCDC9-201ENST00000221922 THRAP3Q9Y2W1 955 aaKnown RBP26.45■■□□□ 1.83
CCDC9-201ENST00000221922 ANKRD36CQ5JPF3 1778 aa26.45■■□□□ 1.82
CCDC9-201ENST00000221922 PCCAP05165 728 aaPredicted RBP26.45■■□□□ 1.82
CCDC9-201ENST00000221922 CYP19A1P11511 503 aaPredicted RBP26.45■■□□□ 1.82
CCDC9-201ENST00000221922 CNPY2Q9Y2B0 182 aa26.45■■□□□ 1.82
CCDC9-201ENST00000221922 EYA2O00167 538 aa26.44■■□□□ 1.82
CCDC9-201ENST00000221922 F13A1P00488 732 aa26.44■■□□□ 1.82
CCDC9-201ENST00000221922 ANKRD1Q15327 319 aa26.44■■□□□ 1.82
CCDC9-201ENST00000221922 TSGA10IPQ3SY00 556 aa26.44■■□□□ 1.82
CCDC9-201ENST00000221922 TICAM2Q86XR7 235 aa26.44■■□□□ 1.82
CCDC9-201ENST00000221922 SLC4A9Q96Q91 983 aa26.44■■□□□ 1.82
CCDC9-201ENST00000221922 PLA2G12BQ9BX93 195 aa26.44■■□□□ 1.82
CCDC9-201ENST00000221922 ZNF330Q9Y3S2 320 aaPredicted RBP26.44■■□□□ 1.82
CCDC9-201ENST00000221922 ATP6V1DQ9Y5K8 247 aa26.44■■□□□ 1.82
CCDC9-201ENST00000221922 SPATA31A1Q5TZJ5 1347 aa26.44■■□□□ 1.82
CCDC9-201ENST00000221922 GIGYF2Q6Y7W6 1299 aaKnown RBP26.43■■□□□ 1.82
CCDC9-201ENST00000221922 FAM184AQ8NB25 1140 aa26.43■■□□□ 1.82
CCDC9-201ENST00000221922 PRKCSHP14314 528 aaPredicted RBP26.43■■□□□ 1.82
CCDC9-201ENST00000221922 CCDC183Q5T5S1 534 aa26.43■■□□□ 1.82
CCDC9-201ENST00000221922 ALDH8A1Q9H2A2 487 aaPredicted RBP26.43■■□□□ 1.82
CCDC9-201ENST00000221922 ZNF609O15014 1411 aa26.42■■□□□ 1.82
CCDC9-201ENST00000221922 RRP9O43818 475 aaKnown RBP26.42■■□□□ 1.82
CCDC9-201ENST00000221922 TAF5LO75529 589 aa26.42■■□□□ 1.82
CCDC9-201ENST00000221922 LARGE1O95461 756 aa26.42■■□□□ 1.82
CCDC9-201ENST00000221922 UBE2HP62256 183 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms