RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 LMBR1LQ6UX01 489 aa26.57■■□□□ 1.84
CCDC9-201ENST00000221922 TMEM87AQ8NBN3 555 aa26.57■■□□□ 1.84
CCDC9-201ENST00000221922 ATG3Q9NT62 314 aa26.57■■□□□ 1.84
CCDC9-201ENST00000221922 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.57■■□□□ 1.84
CCDC9-201ENST00000221922 NECTIN1Q15223 517 aa26.56■■□□□ 1.84
CCDC9-201ENST00000221922 TNNI3KQ59H18 835 aa26.56■■□□□ 1.84
CCDC9-201ENST00000221922 VPS53Q5VIR6 699 aa26.56■■□□□ 1.84
CCDC9-201ENST00000221922 FPGT-TNNI3KV9GXZ4 949 aa26.56■■□□□ 1.84
CCDC9-201ENST00000221922 ATP5JP18859 108 aa26.56■■□□□ 1.84
CCDC9-201ENST00000221922 CYP46A1Q9Y6A2 500 aa26.56■■□□□ 1.84
CCDC9-201ENST00000221922 TCHHQ07283 1943 aa26.55■■□□□ 1.84
CCDC9-201ENST00000221922 OFD1O75665 1012 aa26.55■■□□□ 1.84
CCDC9-201ENST00000221922 MAP4K1Q92918 833 aa26.55■■□□□ 1.84
CCDC9-201ENST00000221922 ISCA1Q9BUE6 129 aa26.55■■□□□ 1.84
CCDC9-201ENST00000221922 ZSWIM6Q9HCJ5 1215 aa26.55■■□□□ 1.84
CCDC9-201ENST00000221922 RFX7Q2KHR2 1363 aa26.55■■□□□ 1.84
CCDC9-201ENST00000221922 TFCP2Q12800 502 aa26.54■■□□□ 1.84
CCDC9-201ENST00000221922 RUFY3Q7L099 469 aa26.54■■□□□ 1.84
CCDC9-201ENST00000221922 FAM227BQ96M60 508 aa26.54■■□□□ 1.84
CCDC9-201ENST00000221922 JAKMIP1Q96N16 626 aaKnown RBP26.54■■□□□ 1.84
CCDC9-201ENST00000221922 RBM8AQ9Y5S9 174 aaKnown RBP26.54■■□□□ 1.84
CCDC9-201ENST00000221922 STARD3NLO95772 234 aa26.54■■□□□ 1.84
CCDC9-201ENST00000221922 KCNJ4P48050 445 aa26.54■■□□□ 1.84
CCDC9-201ENST00000221922 USP48Q86UV5 1035 aa26.54■■□□□ 1.84
CCDC9-201ENST00000221922 DNAJC10Q8IXB1 793 aa26.54■■□□□ 1.84
CCDC9-201ENST00000221922 ZSCAN31Q96LW9 406 aaPredicted RBP26.54■■□□□ 1.84
CCDC9-201ENST00000221922 NRAPQ86VF7 1730 aa26.53■■□□□ 1.84
CCDC9-201ENST00000221922 PDRG1Q9NUG6 133 aa26.53■■□□□ 1.84
CCDC9-201ENST00000221922 MED23Q9ULK4 1368 aa26.53■■□□□ 1.84
CCDC9-201ENST00000221922 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.53■■□□□ 1.84
CCDC9-201ENST00000221922 TRIM28Q13263 835 aaKnown RBP26.53■■□□□ 1.84
CCDC9-201ENST00000221922 TSPY26PQ9H489 355 aa26.53■■□□□ 1.84
CCDC9-201ENST00000221922 EIF2AK3Q9NZJ5 1116 aaKnown RBP26.53■■□□□ 1.84
CCDC9-201ENST00000221922 DBNLQ9UJU6 430 aaKnown RBP26.53■■□□□ 1.84
CCDC9-201ENST00000221922 ZNF500O60304 480 aaPredicted RBP26.52■■□□□ 1.84
CCDC9-201ENST00000221922 GADD45BO75293 160 aaPredicted RBP26.52■■□□□ 1.84
CCDC9-201ENST00000221922 TCIRG1Q13488 830 aa26.52■■□□□ 1.84
CCDC9-201ENST00000221922 RNF20Q5VTR2 975 aa26.52■■□□□ 1.84
CCDC9-201ENST00000221922 CREB3L3Q68CJ9 461 aa26.52■■□□□ 1.84
CCDC9-201ENST00000221922 SH2B1Q9NRF2 756 aaPredicted RBP26.52■■□□□ 1.84
CCDC9-201ENST00000221922 PHLPP1O60346 1717 aa26.52■■□□□ 1.84
CCDC9-201ENST00000221922 EXOC5O00471 708 aa26.51■■□□□ 1.83
CCDC9-201ENST00000221922 PHF14O94880 888 aa26.51■■□□□ 1.83
CCDC9-201ENST00000221922 TPM2P07951 284 aa26.51■■□□□ 1.83
CCDC9-201ENST00000221922 PSMA5P28066 241 aa26.51■■□□□ 1.83
CCDC9-201ENST00000221922 A0A0D9SFI3 127 aa26.51■■□□□ 1.83
CCDC9-201ENST00000221922 JCADQ9P266 1359 aa26.51■■□□□ 1.83
CCDC9-201ENST00000221922 ZSCAN22P10073 491 aaPredicted RBP26.5■■□□□ 1.83
CCDC9-201ENST00000221922 MCM5P33992 734 aa26.5■■□□□ 1.83
CCDC9-201ENST00000221922 KIF6Q6ZMV9 814 aa26.5■■□□□ 1.83
CCDC9-201ENST00000221922 CDCA7Q9BWT1 371 aaPredicted RBP26.5■■□□□ 1.83
CCDC9-201ENST00000221922 GDPD2Q9HCC8 539 aa26.5■■□□□ 1.83
CCDC9-201ENST00000221922 ADCK5Q3MIX3 580 aa26.49■■□□□ 1.83
CCDC9-201ENST00000221922 GPR108Q9NPR9 543 aa26.49■■□□□ 1.83
CCDC9-201ENST00000221922 SMC3Q9UQE7 1217 aa26.49■■□□□ 1.83
CCDC9-201ENST00000221922 CHMP3Q9Y3E7 222 aa26.49■■□□□ 1.83
CCDC9-201ENST00000221922 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.48■■□□□ 1.83
CCDC9-201ENST00000221922 ATG9AQ7Z3C6 839 aa26.48■■□□□ 1.83
CCDC9-201ENST00000221922 HMG20BQ9P0W2 317 aa26.48■■□□□ 1.83
CCDC9-201ENST00000221922 DOT1LQ8TEK3 1739 aa26.48■■□□□ 1.83
CCDC9-201ENST00000221922 SLC27A2O14975 620 aa26.48■■□□□ 1.83
CCDC9-201ENST00000221922 STX6O43752 255 aa26.48■■□□□ 1.83
CCDC9-201ENST00000221922 ZKSCAN5Q9Y2L8 839 aa26.48■■□□□ 1.83
CCDC9-201ENST00000221922 SYT1P21579 422 aa26.47■■□□□ 1.83
CCDC9-201ENST00000221922 CCDC39Q9UFE4 941 aa26.47■■□□□ 1.83
CCDC9-201ENST00000221922 CPA1P15085 419 aa26.46■■□□□ 1.83
CCDC9-201ENST00000221922 IL15P40933 162 aaPredicted RBP26.46■■□□□ 1.83
CCDC9-201ENST00000221922 FOXD4L6Q3SYB3 417 aaPredicted RBP26.46■■□□□ 1.83
CCDC9-201ENST00000221922 FOXD4L3Q6VB84 417 aaPredicted RBP26.46■■□□□ 1.83
CCDC9-201ENST00000221922 MAP3K15Q6ZN16 1313 aa26.46■■□□□ 1.83
CCDC9-201ENST00000221922 CIAO1O76071 339 aa26.46■■□□□ 1.83
CCDC9-201ENST00000221922 TERF1P54274 439 aa26.46■■□□□ 1.83
CCDC9-201ENST00000221922 HAUS7Q99871 368 aa26.46■■□□□ 1.83
CCDC9-201ENST00000221922 RNF214Q8ND24 703 aa26.45■■□□□ 1.83
CCDC9-201ENST00000221922 DBNDD2Q9BQY9 259 aa26.45■■□□□ 1.83
CCDC9-201ENST00000221922 THRAP3Q9Y2W1 955 aaKnown RBP26.45■■□□□ 1.83
CCDC9-201ENST00000221922 ANKRD36CQ5JPF3 1778 aa26.45■■□□□ 1.82
CCDC9-201ENST00000221922 PCCAP05165 728 aaPredicted RBP26.45■■□□□ 1.82
CCDC9-201ENST00000221922 CYP19A1P11511 503 aaPredicted RBP26.45■■□□□ 1.82
CCDC9-201ENST00000221922 CNPY2Q9Y2B0 182 aa26.45■■□□□ 1.82
CCDC9-201ENST00000221922 EYA2O00167 538 aa26.44■■□□□ 1.82
CCDC9-201ENST00000221922 F13A1P00488 732 aa26.44■■□□□ 1.82
CCDC9-201ENST00000221922 ANKRD1Q15327 319 aa26.44■■□□□ 1.82
CCDC9-201ENST00000221922 TSGA10IPQ3SY00 556 aa26.44■■□□□ 1.82
CCDC9-201ENST00000221922 TICAM2Q86XR7 235 aa26.44■■□□□ 1.82
CCDC9-201ENST00000221922 SLC4A9Q96Q91 983 aa26.44■■□□□ 1.82
CCDC9-201ENST00000221922 PLA2G12BQ9BX93 195 aa26.44■■□□□ 1.82
CCDC9-201ENST00000221922 ZNF330Q9Y3S2 320 aaPredicted RBP26.44■■□□□ 1.82
CCDC9-201ENST00000221922 ATP6V1DQ9Y5K8 247 aa26.44■■□□□ 1.82
CCDC9-201ENST00000221922 SPATA31A1Q5TZJ5 1347 aa26.44■■□□□ 1.82
CCDC9-201ENST00000221922 GIGYF2Q6Y7W6 1299 aaKnown RBP26.43■■□□□ 1.82
CCDC9-201ENST00000221922 FAM184AQ8NB25 1140 aa26.43■■□□□ 1.82
CCDC9-201ENST00000221922 PRKCSHP14314 528 aaPredicted RBP26.43■■□□□ 1.82
CCDC9-201ENST00000221922 CCDC183Q5T5S1 534 aa26.43■■□□□ 1.82
CCDC9-201ENST00000221922 ALDH8A1Q9H2A2 487 aaPredicted RBP26.43■■□□□ 1.82
CCDC9-201ENST00000221922 ZNF609O15014 1411 aa26.42■■□□□ 1.82
CCDC9-201ENST00000221922 RRP9O43818 475 aaKnown RBP26.42■■□□□ 1.82
CCDC9-201ENST00000221922 TAF5LO75529 589 aa26.42■■□□□ 1.82
CCDC9-201ENST00000221922 LARGE1O95461 756 aa26.42■■□□□ 1.82
CCDC9-201ENST00000221922 UBE2HP62256 183 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms