RNA–Protein interactions for RNA: ENST00000210227.4

PTBP3-201, Transcript of polypyrimidine tract binding protein 3, humanhuman

TSL 2

Gene PTBP3, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-201ENST00000210227 SH3TC1Q8TE82 1336 aa25.49■■□□□ 1.67
PTBP3-201ENST00000210227 CDHR2Q9BYE9 1310 aa25.49■■□□□ 1.67
PTBP3-201ENST00000210227 GMPSP49915 693 aaPredicted RBP25.49■■□□□ 1.67
PTBP3-201ENST00000210227 KIAA2012Q0VF49 1180 aa25.49■■□□□ 1.67
PTBP3-201ENST00000210227 TCIRG1Q13488 830 aa25.49■■□□□ 1.67
PTBP3-201ENST00000210227 KRT24Q2M2I5 525 aa25.49■■□□□ 1.67
PTBP3-201ENST00000210227 DDX46Q7L014 1031 aaKnown RBP25.49■■□□□ 1.67
PTBP3-201ENST00000210227 MPNDQ8N594 471 aa25.49■■□□□ 1.67
PTBP3-201ENST00000210227 ECE1P42892 770 aa25.48■■□□□ 1.67
PTBP3-201ENST00000210227 GRAPQ13588 217 aa25.48■■□□□ 1.67
PTBP3-201ENST00000210227 GRAPLQ8TC17 118 aaPredicted RBP25.48■■□□□ 1.67
PTBP3-201ENST00000210227 GRM1Q13255 1194 aa25.47■■□□□ 1.67
PTBP3-201ENST00000210227 CIAPIN1Q6FI81 312 aa25.47■■□□□ 1.67
PTBP3-201ENST00000210227 CYP4F22Q6NT55 531 aa25.47■■□□□ 1.67
PTBP3-201ENST00000210227 TLL2Q9Y6L7 1015 aa25.47■■□□□ 1.67
PTBP3-201ENST00000210227 CCDC146Q8IYE0 955 aa25.46■■□□□ 1.67
PTBP3-201ENST00000210227 CHPF2Q9P2E5 772 aa25.46■■□□□ 1.67
PTBP3-201ENST00000210227 CHL1O00533 1208 aa25.45■■□□□ 1.66
PTBP3-201ENST00000210227 RAD17O75943 681 aa25.45■■□□□ 1.66
PTBP3-201ENST00000210227 NEUROD2Q15784 382 aa25.45■■□□□ 1.66
PTBP3-201ENST00000210227 GPR101Q96P66 508 aaPredicted RBP25.45■■□□□ 1.66
PTBP3-201ENST00000210227 COL4A1P02462 1669 aa25.45■■□□□ 1.66
PTBP3-201ENST00000210227 ZNF428Q96B54 188 aa25.44■■□□□ 1.66
PTBP3-201ENST00000210227 GLIS2Q9BZE0 524 aaPredicted RBP25.44■■□□□ 1.66
PTBP3-201ENST00000210227 MYBBP1AQ9BQG0 1328 aaKnown RBP25.43■■□□□ 1.66
PTBP3-201ENST00000210227 TNIP1Q15025 636 aa25.43■■□□□ 1.66
PTBP3-201ENST00000210227 TMC4Q7Z404 712 aa25.43■■□□□ 1.66
PTBP3-201ENST00000210227 BCL2L13Q9BXK5 485 aa25.43■■□□□ 1.66
PTBP3-201ENST00000210227 LAS1LQ9Y4W2 734 aaKnown RBP25.43■■□□□ 1.66
PTBP3-201ENST00000210227 CELF2O95319 508 aaKnown RBP25.42■■□□□ 1.66
PTBP3-201ENST00000210227 HDGFL1Q5TGJ6 251 aa25.42■■□□□ 1.66
PTBP3-201ENST00000210227 PLBD2Q8NHP8 589 aa25.42■■□□□ 1.66
PTBP3-201ENST00000210227 BEGAINQ9BUH8 593 aa25.42■■□□□ 1.66
PTBP3-201ENST00000210227 TRIM35Q9UPQ4 493 aa25.42■■□□□ 1.66
PTBP3-201ENST00000210227 YDJCA8MPS7 323 aa25.41■■□□□ 1.66
PTBP3-201ENST00000210227 SAPCD2Q86UD0 394 aa25.41■■□□□ 1.66
PTBP3-201ENST00000210227 TRPM4Q8TD43 1214 aa25.41■■□□□ 1.66
PTBP3-201ENST00000210227 PGAP2Q9UHJ9 254 aa25.41■■□□□ 1.66
PTBP3-201ENST00000210227 HOXB7P09629 217 aa25.4■■□□□ 1.66
PTBP3-201ENST00000210227 ZC3H15Q8WU90 426 aaKnown RBP25.4■■□□□ 1.66
PTBP3-201ENST00000210227 ABHD8Q96I13 439 aa25.4■■□□□ 1.66
PTBP3-201ENST00000210227 AOC2O75106 756 aa25.39■■□□□ 1.66
PTBP3-201ENST00000210227 HIRAP54198 1017 aaPredicted RBP25.39■■□□□ 1.66
PTBP3-201ENST00000210227 RUNDC1Q96C34 613 aa25.39■■□□□ 1.66
PTBP3-201ENST00000210227 ISCA1Q9BUE6 129 aa25.39■■□□□ 1.66
PTBP3-201ENST00000210227 SHTN1A0MZ66 631 aa25.38■■□□□ 1.65
PTBP3-201ENST00000210227 ANKRD13DQ6ZTN6 518 aa25.38■■□□□ 1.65
PTBP3-201ENST00000210227 FAM89AQ96GI7 184 aa25.38■■□□□ 1.65
PTBP3-201ENST00000210227 POLR2AP24928 1970 aaKnown RBP25.37■■□□□ 1.65
PTBP3-201ENST00000210227 ATP5J2-PTCD1G3V325 749 aa25.37■■□□□ 1.65
PTBP3-201ENST00000210227 MAP2K2P36507 400 aa25.37■■□□□ 1.65
PTBP3-201ENST00000210227 WDR43Q15061 677 aaKnown RBP eCLIP25.37■■□□□ 1.65
PTBP3-201ENST00000210227 MICALL2Q8IY33 904 aa25.37■■□□□ 1.65
PTBP3-201ENST00000210227 CELF1Q92879 486 aaKnown RBP25.37■■□□□ 1.65
PTBP3-201ENST00000210227 ZNF408Q9H9D4 720 aa25.37■■□□□ 1.65
PTBP3-201ENST00000210227 DBF4Q9UBU7 674 aaPredicted RBP25.37■■□□□ 1.65
PTBP3-201ENST00000210227 CNOT7Q9UIV1 285 aaKnown RBP25.37■■□□□ 1.65
PTBP3-201ENST00000210227 SF3B3Q15393 1217 aaKnown RBP25.36■■□□□ 1.65
PTBP3-201ENST00000210227 HHIPL1Q96JK4 782 aa25.36■■□□□ 1.65
PTBP3-201ENST00000210227 SCN9AQ15858 1988 aa25.36■■□□□ 1.65
PTBP3-201ENST00000210227 WASHC4Q2M389 1173 aa25.35■■□□□ 1.65
PTBP3-201ENST00000210227 CDC37L1Q7L3B6 337 aa25.35■■□□□ 1.65
PTBP3-201ENST00000210227 DBNDD1Q9H9R9 158 aa25.35■■□□□ 1.65
PTBP3-201ENST00000210227 TSKSQ9UJT2 592 aa25.35■■□□□ 1.65
PTBP3-201ENST00000210227 H7C1D1 291 aa25.34■■□□□ 1.65
PTBP3-201ENST00000210227 HYPKQ9NX55 129 aa25.34■■□□□ 1.65
PTBP3-201ENST00000210227 NSFL1CQ9UNZ2 370 aaKnown RBP25.34■■□□□ 1.65
PTBP3-201ENST00000210227 ZBTB12Q9Y330 459 aaPredicted RBP25.34■■□□□ 1.65
PTBP3-201ENST00000210227 CASP8AP2Q9UKL3 1982 aa25.34■■□□□ 1.65
PTBP3-201ENST00000210227 PSMD14O00487 310 aa25.33■■□□□ 1.65
PTBP3-201ENST00000210227 RTL5Q5HYW3 569 aaPredicted RBP25.33■■□□□ 1.65
PTBP3-201ENST00000210227 DPF2Q92785 391 aa25.33■■□□□ 1.65
PTBP3-201ENST00000210227 PSME4Q14997 1843 aa25.33■■□□□ 1.64
PTBP3-201ENST00000210227 GPSM2P81274 684 aa25.32■■□□□ 1.64
PTBP3-201ENST00000210227 DDX10Q13206 875 aaKnown RBP25.32■■□□□ 1.64
PTBP3-201ENST00000210227 DUSP27Q5VZP5 1158 aa25.32■■□□□ 1.64
PTBP3-201ENST00000210227 CFAP44Q96MT7 982 aa25.32■■□□□ 1.64
PTBP3-201ENST00000210227 POLLQ9UGP5 575 aa25.32■■□□□ 1.64
PTBP3-201ENST00000210227 C6orf229H3BNL8 230 aa25.31■■□□□ 1.64
PTBP3-201ENST00000210227 RIMBP2O15034 1052 aa25.31■■□□□ 1.64
PTBP3-201ENST00000210227 BRPF1P55201 1214 aaPredicted RBP25.31■■□□□ 1.64
PTBP3-201ENST00000210227 ADAMTS8Q9UP79 889 aa25.31■■□□□ 1.64
PTBP3-201ENST00000210227 IRS4O14654 1257 aaPredicted RBP25.3■■□□□ 1.64
PTBP3-201ENST00000210227 CA12O43570 354 aa25.3■■□□□ 1.64
PTBP3-201ENST00000210227 ECE2O60344 883 aa25.3■■□□□ 1.64
PTBP3-201ENST00000210227 TRIM28Q13263 835 aaKnown RBP25.3■■□□□ 1.64
PTBP3-201ENST00000210227 SAMD7Q7Z3H4 446 aa25.3■■□□□ 1.64
PTBP3-201ENST00000210227 USP48Q86UV5 1035 aa25.3■■□□□ 1.64
PTBP3-201ENST00000210227 MBIPQ9NS73 344 aa25.3■■□□□ 1.64
PTBP3-201ENST00000210227 RTL9Q8NET4 1388 aa25.3■■□□□ 1.64
PTBP3-201ENST00000210227 TBC1D10BQ4KMP7 808 aaPredicted RBP25.29■■□□□ 1.64
PTBP3-201ENST00000210227 EGFRP00533 1210 aa25.28■■□□□ 1.64
PTBP3-201ENST00000210227 RPS12P25398 132 aaKnown RBP25.28■■□□□ 1.64
PTBP3-201ENST00000210227 EYA3Q99504 573 aa25.28■■□□□ 1.64
PTBP3-201ENST00000210227 HUNKP57058 714 aa25.27■■□□□ 1.64
PTBP3-201ENST00000210227 GOLGA2Q08379 1002 aa25.27■■□□□ 1.64
PTBP3-201ENST00000210227 DOK7Q18PE1 504 aa25.27■■□□□ 1.64
PTBP3-201ENST00000210227 DLK2Q6UY11 383 aa25.27■■□□□ 1.64
PTBP3-201ENST00000210227 TBC1D16Q8TBP0 767 aa25.27■■□□□ 1.64
PTBP3-201ENST00000210227 KCNQ5Q9NR82 932 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms