RNA–Protein interactions for RNA: ENSMUST00000216558.1

Ubp1-206, Transcript of Upstream-binding protein 1, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ubp1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-206ENSMUST00000216558 4931408C20RikE9PWP9 1381 aa18.92■□□□□ 0.62
Ubp1-206ENSMUST00000216558 Rad50P70388 1312 aa18.92■□□□□ 0.62
Ubp1-206ENSMUST00000216558 Zkscan16A2ALW2 728 aa18.92■□□□□ 0.62
Ubp1-206ENSMUST00000216558 Cyp2c23E9Q5K4 494 aa18.92■□□□□ 0.62
Ubp1-206ENSMUST00000216558 Slc38a10Q5I012 1090 aa18.92■□□□□ 0.62
Ubp1-206ENSMUST00000216558 Rbbp8nlA2ABX0 614 aa18.91■□□□□ 0.62
Ubp1-206ENSMUST00000216558 Ms4a2P20490 235 aa18.91■□□□□ 0.62
Ubp1-206ENSMUST00000216558 Gimap8Q75N62 688 aa18.91■□□□□ 0.62
Ubp1-206ENSMUST00000216558 Ppil4Q9CXG3 492 aaKnown RBP18.91■□□□□ 0.62
Ubp1-206ENSMUST00000216558 Zfyve9A2A8R0 1397 aa18.91■□□□□ 0.62
Ubp1-206ENSMUST00000216558 Duox1A2AQ92 1551 aa18.9■□□□□ 0.62
Ubp1-206ENSMUST00000216558 ZyxQ62523 564 aa18.9■□□□□ 0.62
Ubp1-206ENSMUST00000216558 Zkscan8Q8BSL0 588 aa18.9■□□□□ 0.62
Ubp1-206ENSMUST00000216558 Q8BT18 775 aa18.9■□□□□ 0.62
Ubp1-206ENSMUST00000216558 Cfap44E9Q5M6 1843 aa18.9■□□□□ 0.62
Ubp1-206ENSMUST00000216558 Hmgb2P30681 210 aaKnown RBP18.89■□□□□ 0.62
Ubp1-206ENSMUST00000216558 Ddx11Q6AXC6 880 aa18.89■□□□□ 0.62
Ubp1-206ENSMUST00000216558 Top1mtQ8R4U6 593 aa18.89■□□□□ 0.62
Ubp1-206ENSMUST00000216558 Snrpa1P57784 255 aaKnown RBP18.89■□□□□ 0.61
Ubp1-206ENSMUST00000216558 Plbd2Q3TCN2 594 aa18.89■□□□□ 0.61
Ubp1-206ENSMUST00000216558 Vps54Q5SPW0 977 aa18.89■□□□□ 0.61
Ubp1-206ENSMUST00000216558 Krt25Q8VCW2 446 aa18.89■□□□□ 0.61
Ubp1-206ENSMUST00000216558 RtcbQ99LF4 505 aaKnown RBP18.89■□□□□ 0.61
Ubp1-206ENSMUST00000216558 Rdm1Q9CQK3 281 aa18.89■□□□□ 0.61
Ubp1-206ENSMUST00000216558 Stox1B2RQL2 990 aa18.88■□□□□ 0.61
Ubp1-206ENSMUST00000216558 Bin2D3Z6Q9 489 aa18.88■□□□□ 0.61
Ubp1-206ENSMUST00000216558 Slc4a1P04919 929 aa18.88■□□□□ 0.61
Ubp1-206ENSMUST00000216558 Bmp2kQ91Z96 1138 aa18.88■□□□□ 0.61
Ubp1-206ENSMUST00000216558 LlphQ9D945 130 aaKnown RBP18.88■□□□□ 0.61
Ubp1-206ENSMUST00000216558 Kcnq5Q9JK45 933 aa18.88■□□□□ 0.61
Ubp1-206ENSMUST00000216558 Catsper2A2ARP9 588 aa18.87■□□□□ 0.61
Ubp1-206ENSMUST00000216558 TsksO54887 585 aa18.87■□□□□ 0.61
Ubp1-206ENSMUST00000216558 Plekho1Q9JIY0 408 aa18.87■□□□□ 0.61
Ubp1-206ENSMUST00000216558 Anxa1P10107 346 aaKnown RBP18.86■□□□□ 0.61
Ubp1-206ENSMUST00000216558 Plekhf1Q3TB82 279 aa18.86■□□□□ 0.61
Ubp1-206ENSMUST00000216558 Jakmip1Q8BVL9 626 aa18.86■□□□□ 0.61
Ubp1-206ENSMUST00000216558 Rtn4Q99P72 1162 aaKnown RBP18.86■□□□□ 0.61
Ubp1-206ENSMUST00000216558 Ubr3Q5U430 1889 aa18.86■□□□□ 0.61
Ubp1-206ENSMUST00000216558 Pde8bE9Q4S1 865 aa18.85■□□□□ 0.61
Ubp1-206ENSMUST00000216558 CltaO08585 235 aa18.85■□□□□ 0.61
Ubp1-206ENSMUST00000216558 Ubxn10Q8BG34 277 aa18.85■□□□□ 0.61
Ubp1-206ENSMUST00000216558 Cyp27a1Q9DBG1 533 aa18.85■□□□□ 0.61
Ubp1-206ENSMUST00000216558 Mlh1Q9JK91 760 aa18.85■□□□□ 0.61
Ubp1-206ENSMUST00000216558 Foxo3Q9WVH4 672 aa18.85■□□□□ 0.61
Ubp1-206ENSMUST00000216558 Ubn2Q80WC1 1314 aa18.85■□□□□ 0.61
Ubp1-206ENSMUST00000216558 Atp2b3Q0VF55 1220 aa18.85■□□□□ 0.61
Ubp1-206ENSMUST00000216558 Ifit2Q64112 472 aa18.85■□□□□ 0.61
Ubp1-206ENSMUST00000216558 Ankrd13dQ6PD24 605 aa18.85■□□□□ 0.61
Ubp1-206ENSMUST00000216558 AnlnQ8K298 1121 aaKnown RBP18.85■□□□□ 0.61
Ubp1-206ENSMUST00000216558 Col3a1P08121 1464 aa18.84■□□□□ 0.61
Ubp1-206ENSMUST00000216558 Pde4bB1AWC9 736 aa18.84■□□□□ 0.61
Ubp1-206ENSMUST00000216558 Mdm2P23804 489 aa18.84■□□□□ 0.61
Ubp1-206ENSMUST00000216558 Srp68Q8BMA6 625 aaKnown RBP18.84■□□□□ 0.61
Ubp1-206ENSMUST00000216558 Ift57Q8BXG3 429 aa18.84■□□□□ 0.61
Ubp1-206ENSMUST00000216558 Sf3b3Q921M3 1217 aaKnown RBP18.84■□□□□ 0.61
Ubp1-206ENSMUST00000216558 PhaxQ9JJT9 385 aaKnown RBP18.84■□□□□ 0.61
Ubp1-206ENSMUST00000216558 Add2Q9QYB8 725 aa18.84■□□□□ 0.61
Ubp1-206ENSMUST00000216558 Npc1l1Q6T3U4 1333 aa18.84■□□□□ 0.61
Ubp1-206ENSMUST00000216558 Vars2Q3U2A8 1060 aa18.83■□□□□ 0.61
Ubp1-206ENSMUST00000216558 Rab3gap1Q80UJ7 981 aa18.83■□□□□ 0.61
Ubp1-206ENSMUST00000216558 Tshz3Q8CGV9 1081 aa18.83■□□□□ 0.61
Ubp1-206ENSMUST00000216558 Sept1P42209 366 aa18.82■□□□□ 0.6
Ubp1-206ENSMUST00000216558 Ddx46Q569Z5 1032 aaKnown RBP18.82■□□□□ 0.6
Ubp1-206ENSMUST00000216558 Kiaa0319Q5SZV5 1081 aa18.82■□□□□ 0.6
Ubp1-206ENSMUST00000216558 Amhr2Q8K592 568 aa18.82■□□□□ 0.6
Ubp1-206ENSMUST00000216558 Cyp3a57D3YYZ0 503 aa18.82■□□□□ 0.6
Ubp1-206ENSMUST00000216558 Ube4aE9Q735 1028 aa18.82■□□□□ 0.6
Ubp1-206ENSMUST00000216558 Golim4Q8BXA1 655 aa18.82■□□□□ 0.6
Ubp1-206ENSMUST00000216558 Ccne2Q9Z238 404 aa18.82■□□□□ 0.6
Ubp1-206ENSMUST00000216558 Rfx1P48377 963 aa18.81■□□□□ 0.6
Ubp1-206ENSMUST00000216558 TnksQ6PFX9 1320 aa18.81■□□□□ 0.6
Ubp1-206ENSMUST00000216558 Fam160b2Q80YR2 744 aa18.81■□□□□ 0.6
Ubp1-206ENSMUST00000216558 Ppp4r3bQ922R5 820 aa18.81■□□□□ 0.6
Ubp1-206ENSMUST00000216558 Scn11aQ9R053 1765 aa18.81■□□□□ 0.6
Ubp1-206ENSMUST00000216558 MecomP14404 1042 aa18.8■□□□□ 0.6
Ubp1-206ENSMUST00000216558 Nek11Q8C0Q4 628 aa18.8■□□□□ 0.6
Ubp1-206ENSMUST00000216558 StrbpQ91WM1 672 aaKnown RBP18.8■□□□□ 0.6
Ubp1-206ENSMUST00000216558 Riok1Q922Q2 567 aa18.8■□□□□ 0.6
Ubp1-206ENSMUST00000216558 Myt1Q8CFC2 1127 aa18.79■□□□□ 0.6
Ubp1-206ENSMUST00000216558 Erc1Q99MI1 1120 aa18.79■□□□□ 0.6
Ubp1-206ENSMUST00000216558 Ak2Q9WTP6 239 aa18.79■□□□□ 0.6
Ubp1-206ENSMUST00000216558 Znfx1Q8R151 1909 aaKnown RBP18.79■□□□□ 0.6
Ubp1-206ENSMUST00000216558 Rbm8a2A0A0N4SUH6 174 aa18.78■□□□□ 0.6
Ubp1-206ENSMUST00000216558 Speer4dL7N216 212 aa18.78■□□□□ 0.6
Ubp1-206ENSMUST00000216558 Gm4340L7N2C4 268 aa18.78■□□□□ 0.6
Ubp1-206ENSMUST00000216558 NpeppsQ11011 920 aa18.78■□□□□ 0.6
Ubp1-206ENSMUST00000216558 RubcnlQ3TD16 648 aa18.78■□□□□ 0.6
Ubp1-206ENSMUST00000216558 Pim2Q62070 370 aa18.78■□□□□ 0.6
Ubp1-206ENSMUST00000216558 Sugp2Q8CH09 1067 aa18.78■□□□□ 0.6
Ubp1-206ENSMUST00000216558 Rbm8aQ9CWZ3 174 aa18.78■□□□□ 0.6
Ubp1-206ENSMUST00000216558 Dbndd1Q9CZ00 160 aa18.78■□□□□ 0.6
Ubp1-206ENSMUST00000216558 Ccdc7Q9D541 371 aa18.78■□□□□ 0.6
Ubp1-206ENSMUST00000216558 Spata31d1bE9QA57 1361 aa18.78■□□□□ 0.6
Ubp1-206ENSMUST00000216558 Setdb1O88974 1307 aa18.78■□□□□ 0.6
Ubp1-206ENSMUST00000216558 Snapc4Q8BP86 1333 aa18.78■□□□□ 0.6
Ubp1-206ENSMUST00000216558 Kcnb2A6H8H5 907 aa18.78■□□□□ 0.6
Ubp1-206ENSMUST00000216558 Ubap1lG3UW59 384 aa18.78■□□□□ 0.6
Ubp1-206ENSMUST00000216558 Rbm26Q6NZN0 1012 aaKnown RBP18.78■□□□□ 0.6
Ubp1-206ENSMUST00000216558 Abtb2Q7TQI7 1024 aa18.78■□□□□ 0.6
Ubp1-206ENSMUST00000216558 Mb21d2Q8C525 428 aa18.78■□□□□ 0.6
Retrieved 100 of 22,080 RNA–protein pairs in 168.3 ms