RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 NfkbibQ60778 359 aa25.83■■□□□ 1.72
Ccdc88a-202ENSMUST00000109477 Pde3bQ61409 1100 aa25.83■■□□□ 1.72
Ccdc88a-202ENSMUST00000109477 Lrp5Q91VN0 1614 aa25.82■■□□□ 1.72
Ccdc88a-202ENSMUST00000109477 Slurp2P0DP59 97 aa25.82■■□□□ 1.72
Ccdc88a-202ENSMUST00000109477 Arid3aQ62431 601 aa25.82■■□□□ 1.72
Ccdc88a-202ENSMUST00000109477 Pde4bB1AWC9 736 aa25.81■■□□□ 1.72
Ccdc88a-202ENSMUST00000109477 Duox1A2AQ92 1551 aa25.81■■□□□ 1.72
Ccdc88a-202ENSMUST00000109477 Kdm3aQ6PCM1 1323 aa25.8■■□□□ 1.72
Ccdc88a-202ENSMUST00000109477 Itga6Q61739 1091 aa25.8■■□□□ 1.72
Ccdc88a-202ENSMUST00000109477 Rabep1O35551 862 aa25.8■■□□□ 1.72
Ccdc88a-202ENSMUST00000109477 CalcaP70160 136 aa25.8■■□□□ 1.72
Ccdc88a-202ENSMUST00000109477 Gsdma2Q32M21 443 aa25.8■■□□□ 1.72
Ccdc88a-202ENSMUST00000109477 DbnlQ62418 436 aa25.8■■□□□ 1.72
Ccdc88a-202ENSMUST00000109477 Unc5clQ6R653 518 aa25.8■■□□□ 1.72
Ccdc88a-202ENSMUST00000109477 4931408C20RikE9PWP9 1381 aa25.79■■□□□ 1.72
Ccdc88a-202ENSMUST00000109477 Prune1Q8BIW1 454 aa25.79■■□□□ 1.72
Ccdc88a-202ENSMUST00000109477 Fam102bQ8BQS4 339 aa25.79■■□□□ 1.72
Ccdc88a-202ENSMUST00000109477 Brf1Q8CFK2 676 aa25.79■■□□□ 1.72
Ccdc88a-202ENSMUST00000109477 Ftl2P49945 183 aa25.78■■□□□ 1.72
Ccdc88a-202ENSMUST00000109477 PsdQ5DTT2 1024 aa25.78■■□□□ 1.72
Ccdc88a-202ENSMUST00000109477 Plcd4Q8K3R3 807 aa25.78■■□□□ 1.72
Ccdc88a-202ENSMUST00000109477 Ncoa5Q91W39 579 aaKnown RBP25.78■■□□□ 1.72
Ccdc88a-202ENSMUST00000109477 Togaram1Q6A070 1776 aaKnown RBP25.78■■□□□ 1.72
Ccdc88a-202ENSMUST00000109477 Atp8a2P98200 1148 aa25.77■■□□□ 1.72
Ccdc88a-202ENSMUST00000109477 Brpf1B2RRD7 1212 aa25.77■■□□□ 1.72
Ccdc88a-202ENSMUST00000109477 Hsp90b1P08113 802 aaKnown RBP25.77■■□□□ 1.72
Ccdc88a-202ENSMUST00000109477 Dbndd1Q9CZ00 160 aa25.77■■□□□ 1.72
Ccdc88a-202ENSMUST00000109477 Cfap44E9Q5M6 1843 aa25.76■■□□□ 1.71
Ccdc88a-202ENSMUST00000109477 Gpr182P43142 395 aa25.76■■□□□ 1.71
Ccdc88a-202ENSMUST00000109477 Wdhd1P59328 1117 aa25.76■■□□□ 1.71
Ccdc88a-202ENSMUST00000109477 Mctp2Q5RJH2 878 aa25.76■■□□□ 1.71
Ccdc88a-202ENSMUST00000109477 Gpr150Q8BL07 427 aa25.76■■□□□ 1.71
Ccdc88a-202ENSMUST00000109477 Rhot2Q8JZN7 620 aa25.76■■□□□ 1.71
Ccdc88a-202ENSMUST00000109477 Stk3Q9JI10 497 aa25.76■■□□□ 1.71
Ccdc88a-202ENSMUST00000109477 Foxo3Q9WVH4 672 aa25.76■■□□□ 1.71
Ccdc88a-202ENSMUST00000109477 Prdm11A2AGX3 565 aa25.75■■□□□ 1.71
Ccdc88a-202ENSMUST00000109477 Ppip5k2Q6ZQB6 1129 aa25.75■■□□□ 1.71
Ccdc88a-202ENSMUST00000109477 GorabQ8BRM2 368 aa25.75■■□□□ 1.71
Ccdc88a-202ENSMUST00000109477 Zbtb45Q52KG4 520 aa25.74■■□□□ 1.71
Ccdc88a-202ENSMUST00000109477 Slc38a10Q5I012 1090 aa25.74■■□□□ 1.71
Ccdc88a-202ENSMUST00000109477 Snrpa1P57784 255 aaKnown RBP25.74■■□□□ 1.71
Ccdc88a-202ENSMUST00000109477 Dnai1Q8C0M8 701 aa25.73■■□□□ 1.71
Ccdc88a-202ENSMUST00000109477 Timm10P62073 90 aa25.72■■□□□ 1.71
Ccdc88a-202ENSMUST00000109477 Zkscan8Q8BSL0 588 aa25.72■■□□□ 1.71
Ccdc88a-202ENSMUST00000109477 Mtfr1lQ9CWE0 289 aa25.72■■□□□ 1.71
Ccdc88a-202ENSMUST00000109477 Nphp3Q7TNH6 1325 aa25.72■■□□□ 1.71
Ccdc88a-202ENSMUST00000109477 Zswim8Q3UHH1 1832 aaKnown RBP25.72■■□□□ 1.71
Ccdc88a-202ENSMUST00000109477 Anxa1P10107 346 aaKnown RBP25.71■■□□□ 1.71
Ccdc88a-202ENSMUST00000109477 ChgaP26339 463 aaKnown RBP25.71■■□□□ 1.71
Ccdc88a-202ENSMUST00000109477 Nol8Q3UHX0 1147 aaKnown RBP25.71■■□□□ 1.71
Ccdc88a-202ENSMUST00000109477 Tmem266Q8BZB3 538 aa25.71■■□□□ 1.71
Ccdc88a-202ENSMUST00000109477 Kif2cQ922S8 721 aa25.71■■□□□ 1.71
Ccdc88a-202ENSMUST00000109477 Il1rapl2Q9ERS6 686 aa25.71■■□□□ 1.71
Ccdc88a-202ENSMUST00000109477 Plekho1Q9JIY0 408 aa25.71■■□□□ 1.71
Ccdc88a-202ENSMUST00000109477 Ambra1A2AH22 1300 aa25.7■■□□□ 1.71
Ccdc88a-202ENSMUST00000109477 EspnlQ3UYR4 1005 aa25.7■■□□□ 1.7
Ccdc88a-202ENSMUST00000109477 Asap2Q7SIG6 958 aa25.7■■□□□ 1.7
Ccdc88a-202ENSMUST00000109477 Fbxo3Q9DC63 480 aa25.69■■□□□ 1.7
Ccdc88a-202ENSMUST00000109477 StrcQ8VIM6 1809 aa25.69■■□□□ 1.7
Ccdc88a-202ENSMUST00000109477 Bin2D3Z6Q9 489 aa25.68■■□□□ 1.7
Ccdc88a-202ENSMUST00000109477 Plbd2Q3TCN2 594 aa25.68■■□□□ 1.7
Ccdc88a-202ENSMUST00000109477 Ppp1r9bQ6R891 817 aaKnown RBP25.68■■□□□ 1.7
Ccdc88a-202ENSMUST00000109477 Kif13bA0A286YCV9 1847 aa25.68■■□□□ 1.7
Ccdc88a-202ENSMUST00000109477 Gm10093D3YYI8 482 aa25.68■■□□□ 1.7
Ccdc88a-202ENSMUST00000109477 Hdac1O09106 482 aaKnown RBP25.68■■□□□ 1.7
Ccdc88a-202ENSMUST00000109477 Rnf123Q5XPI3 1314 aa25.68■■□□□ 1.7
Ccdc88a-202ENSMUST00000109477 Sptbn5F6UCX4 1208 aa25.67■■□□□ 1.7
Ccdc88a-202ENSMUST00000109477 Znf692Q3U381 531 aa25.67■■□□□ 1.7
Ccdc88a-202ENSMUST00000109477 Sf3b3Q921M3 1217 aaKnown RBP25.67■■□□□ 1.7
Ccdc88a-202ENSMUST00000109477 Tfip11Q9ERA6 838 aaKnown RBP25.67■■□□□ 1.7
Ccdc88a-202ENSMUST00000109477 Rbbp8nlA2ABX0 614 aa25.66■■□□□ 1.7
Ccdc88a-202ENSMUST00000109477 Atp2b3Q0VF55 1220 aa25.66■■□□□ 1.7
Ccdc88a-202ENSMUST00000109477 Rab3gap1Q80UJ7 981 aa25.66■■□□□ 1.7
Ccdc88a-202ENSMUST00000109477 EappQ5BU09 281 aa25.66■■□□□ 1.7
Ccdc88a-202ENSMUST00000109477 Pde8bE9Q4S1 865 aa25.65■■□□□ 1.7
Ccdc88a-202ENSMUST00000109477 Vps54Q5SPW0 977 aa25.65■■□□□ 1.7
Ccdc88a-202ENSMUST00000109477 Krt25Q8VCW2 446 aa25.65■■□□□ 1.7
Ccdc88a-202ENSMUST00000109477 St5Q924W7 1134 aa25.65■■□□□ 1.7
Ccdc88a-202ENSMUST00000109477 TsksO54887 585 aa25.64■■□□□ 1.7
Ccdc88a-202ENSMUST00000109477 Tnpo1Q8BFY9 898 aaKnown RBP25.64■■□□□ 1.7
Ccdc88a-202ENSMUST00000109477 Gja10Q9WUS4 505 aa25.64■■□□□ 1.7
Ccdc88a-202ENSMUST00000109477 Slc4a1P04919 929 aa25.63■■□□□ 1.69
Ccdc88a-202ENSMUST00000109477 En2P09066 324 aa25.63■■□□□ 1.69
Ccdc88a-202ENSMUST00000109477 VeztQ3ZK22 780 aa25.63■■□□□ 1.69
Ccdc88a-202ENSMUST00000109477 Scn11aQ9R053 1765 aa25.63■■□□□ 1.69
Ccdc88a-202ENSMUST00000109477 Ppfia1B2RXQ2 1266 aa25.63■■□□□ 1.69
Ccdc88a-202ENSMUST00000109477 Ube4aE9Q735 1028 aa25.63■■□□□ 1.69
Ccdc88a-202ENSMUST00000109477 Eva1cP58659 440 aa25.63■■□□□ 1.69
Ccdc88a-202ENSMUST00000109477 Plekhf1Q3TB82 279 aa25.63■■□□□ 1.69
Ccdc88a-202ENSMUST00000109477 Znrd1-asQ8R0E5 213 aa25.63■■□□□ 1.69
Ccdc88a-202ENSMUST00000109477 Aknad1E9Q8N6 675 aa25.62■■□□□ 1.69
Ccdc88a-202ENSMUST00000109477 Ppil4Q9CXG3 492 aaKnown RBP25.62■■□□□ 1.69
Ccdc88a-202ENSMUST00000109477 Kcnq5Q9JK45 933 aa25.62■■□□□ 1.69
Ccdc88a-202ENSMUST00000109477 Col3a1P08121 1464 aa25.61■■□□□ 1.69
Ccdc88a-202ENSMUST00000109477 Col4a5Q63ZW6 1691 aa25.6■■□□□ 1.69
Ccdc88a-202ENSMUST00000109477 1700029H14RikE9PY36 240 aa25.6■■□□□ 1.69
Ccdc88a-202ENSMUST00000109477 Ddx11Q6AXC6 880 aa25.6■■□□□ 1.69
Ccdc88a-202ENSMUST00000109477 Ift57Q8BXG3 429 aa25.6■■□□□ 1.69
Ccdc88a-202ENSMUST00000109477 Strip1Q8C079 837 aa25.6■■□□□ 1.69
Ccdc88a-202ENSMUST00000109477 Rdm1Q9CQK3 281 aa25.6■■□□□ 1.69
Retrieved 100 of 22,080 RNA–protein pairs in 75.7 ms