RNA–Protein interactions for RNA: ENSMUST00000108362.7

Sptbn4-202, Transcript of Spectrin beta chain, mousemouse

TSL 1 (best) BASIC

Gene Sptbn4, Length 4,861 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4-202ENSMUST00000108362 Q3UJC8 639 aa18.43■□□□□ 0.54
Sptbn4-202ENSMUST00000108362 Rbm33Q9CXK9 1231 aaKnown RBP18.43■□□□□ 0.54
Sptbn4-202ENSMUST00000108362 Tubb4aQ9D6F9 444 aa18.43■□□□□ 0.54
Sptbn4-202ENSMUST00000108362 Cpsf1Q9EPU4 1441 aaKnown RBP18.43■□□□□ 0.54
Sptbn4-202ENSMUST00000108362 Gnat3Q3V3I2 354 aa18.43■□□□□ 0.54
Sptbn4-202ENSMUST00000108362 Specc1Q5SXY1 1067 aa18.43■□□□□ 0.54
Sptbn4-202ENSMUST00000108362 Ccdc122Q8BVN0 290 aa18.43■□□□□ 0.54
Sptbn4-202ENSMUST00000108362 Sptlc2P97363 560 aaKnown RBP18.42■□□□□ 0.54
Sptbn4-202ENSMUST00000108362 Zranb1Q7M760 708 aa18.42■□□□□ 0.54
Sptbn4-202ENSMUST00000108362 Akap8Q9DBR0 687 aaKnown RBP18.42■□□□□ 0.54
Sptbn4-202ENSMUST00000108362 Naip6Q9JIB6 1403 aa18.42■□□□□ 0.54
Sptbn4-202ENSMUST00000108362 MycnP03966 462 aaKnown RBP18.42■□□□□ 0.54
Sptbn4-202ENSMUST00000108362 Dact3Q0PHV7 610 aa18.42■□□□□ 0.54
Sptbn4-202ENSMUST00000108362 Matr3Q8K310 846 aaKnown RBP18.42■□□□□ 0.54
Sptbn4-202ENSMUST00000108362 Mrps25Q9D125 171 aaKnown RBP18.42■□□□□ 0.54
Sptbn4-202ENSMUST00000108362 Olr1Q9EQ09 363 aa18.42■□□□□ 0.54
Sptbn4-202ENSMUST00000108362 Gramd4Q8CB44 633 aa18.41■□□□□ 0.54
Sptbn4-202ENSMUST00000108362 Nup160Q9Z0W3 1402 aaKnown RBP18.41■□□□□ 0.54
Sptbn4-202ENSMUST00000108362 Cdk13Q69ZA1 1511 aaKnown RBP18.41■□□□□ 0.54
Sptbn4-202ENSMUST00000108362 Gm28510A0A087WP28 240 aa18.41■□□□□ 0.54
Sptbn4-202ENSMUST00000108362 Fam170aQ66LM6 333 aa18.41■□□□□ 0.54
Sptbn4-202ENSMUST00000108362 Amotl1Q9D4H4 968 aa18.41■□□□□ 0.54
Sptbn4-202ENSMUST00000108362 Paip2Q9D6V8 124 aa18.41■□□□□ 0.54
Sptbn4-202ENSMUST00000108362 Triml1Q8BVP1 470 aa18.41■□□□□ 0.54
Sptbn4-202ENSMUST00000108362 Slc5a1Q8C3K6 665 aa18.41■□□□□ 0.54
Sptbn4-202ENSMUST00000108362 Rassf4Q8CB96 322 aa18.41■□□□□ 0.54
Sptbn4-202ENSMUST00000108362 Setdb1O88974 1307 aa18.41■□□□□ 0.54
Sptbn4-202ENSMUST00000108362 Kcnh5Q920E3 988 aa18.41■□□□□ 0.54
Sptbn4-202ENSMUST00000108362 Psmb7P70195 277 aa18.4■□□□□ 0.54
Sptbn4-202ENSMUST00000108362 Krt25Q8VCW2 446 aa18.4■□□□□ 0.54
Sptbn4-202ENSMUST00000108362 2310002L09RikQ9D7L5 217 aa18.4■□□□□ 0.54
Sptbn4-202ENSMUST00000108362 Znf287Q9EQB9 759 aa18.4■□□□□ 0.54
Sptbn4-202ENSMUST00000108362 Gapvd1Q6PAR5 1458 aa18.4■□□□□ 0.54
Sptbn4-202ENSMUST00000108362 Echdc1Q9D9V3 322 aa18.4■□□□□ 0.54
Sptbn4-202ENSMUST00000108362 Sept14Q9DA97 430 aa18.4■□□□□ 0.54
Sptbn4-202ENSMUST00000108362 Ccdc6D3YZP9 469 aa18.4■□□□□ 0.54
Sptbn4-202ENSMUST00000108362 Clcn1Q64347 994 aa18.4■□□□□ 0.54
Sptbn4-202ENSMUST00000108362 PdiltQ9DAN1 588 aa18.4■□□□□ 0.54
Sptbn4-202ENSMUST00000108362 Zfp853A0A1D5RM95 733 aa18.4■□□□□ 0.54
Sptbn4-202ENSMUST00000108362 Cnpy2Q9QXT0 182 aa18.4■□□□□ 0.54
Sptbn4-202ENSMUST00000108362 Gm28919A0A087WP35 240 aa18.39■□□□□ 0.54
Sptbn4-202ENSMUST00000108362 AU022751B1B0V2 589 aa18.39■□□□□ 0.54
Sptbn4-202ENSMUST00000108362 Ripply1Q2WG77 201 aa18.39■□□□□ 0.54
Sptbn4-202ENSMUST00000108362 Pik3ap1Q9EQ32 811 aa18.39■□□□□ 0.54
Sptbn4-202ENSMUST00000108362 Egfl6Q9JJZ5 550 aa18.39■□□□□ 0.54
Sptbn4-202ENSMUST00000108362 Pkd2l2Q9JLG4 621 aa18.39■□□□□ 0.54
Sptbn4-202ENSMUST00000108362 Ptgs1P22437 602 aa18.39■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Map3k11Q80XI6 850 aa18.39■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Nbr1P97432 988 aa18.39■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Dph6Q9CQ28 267 aa18.39■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Sbno1Q689Z5 1390 aa18.39■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Lztfl1Q9JHQ5 299 aa18.39■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Nphp3Q7TNH6 1325 aa18.38■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Ppp1r10Q80W00 888 aaKnown RBP18.38■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Irx4Q9QY61 515 aa18.38■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Ppp1r21Q3TDD9 780 aa18.38■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Cplx4Q80WM3 160 aa18.38■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Tbc1d8bA3KGB4 1114 aa18.38■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Ccdc121E9Q6D3 323 aa18.38■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Gbp1Q01514 589 aa18.38■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 GptQ8QZR5 496 aa18.38■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 NsmfQ99NF2 532 aa18.38■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Fam186bD3Z420 943 aa18.38■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Aldh8a1Q8BH00 487 aa18.38■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Gle1Q8R322 699 aa18.38■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Gm7347D3YYI9 267 aa18.37■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Speer4aF8VPX6 267 aa18.37■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Pdzrn3Q69ZS0 1063 aa18.37■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Ankrd24Q80VM7 985 aa18.37■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Cdan1Q8CC12 1239 aa18.37■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Exoc1Q8R3S6 894 aa18.37■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 SfpqQ8VIJ6 699 aaKnown RBP18.37■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 WtapQ9ER69 396 aa18.37■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Atp1a4Q9WV27 1032 aa18.37■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Sycp2lA0A0M3U1B0 842 aa18.37■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Mindy4Q3UQI9 744 aa18.37■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Cnot6lQ8VEG6 555 aa18.37■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Atp8b2P98199 1209 aa18.37■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Ccdc162pQ0VG85 912 aa18.36■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Tti2Q8BGV4 512 aa18.36■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Sept6Q9R1T4 434 aa18.36■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Rnf216P58283 853 aa18.36■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Krt15Q61414 452 aa18.36■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Luc7l2Q7TNC4 392 aaKnown RBP18.36■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Zbtb43Q9DAI4 467 aa18.36■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Atf7ipQ7TT18 1306 aa18.36■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Ptcd1Q8C2E4 695 aaKnown RBP18.36■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Uso1Q9Z1Z0 959 aaKnown RBP18.36■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Lrrc9Q8CDN9 1456 aa18.36■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Adgrl2Q8JZZ7 1487 aa18.36■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Ranbp6Q8BIV3 1105 aa18.35■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Abca5Q8K448 1642 aa18.35■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Vps41Q5KU39 853 aa18.35■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Ccdc186Q8C9S4 917 aa18.35■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 PtprgQ05909 1442 aa18.35■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Gm45015A0A140LII9 184 aa18.35■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Pa2g4P50580 394 aaKnown RBP18.35■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Gas8Q60779 478 aa18.35■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 Ube3aO08759 870 aa18.35■□□□□ 0.53
Sptbn4-202ENSMUST00000108362 VimP20152 466 aaKnown RBP18.35■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 18.2 ms