RNA–Protein interactions for RNA: ENSMUST00000088716.11

Smarcc1-201, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-201ENSMUST00000088716 Iffo1Q8BXL9 562 aa24.68■■□□□ 1.54
Smarcc1-201ENSMUST00000088716 Cfap73J3QPZ5 306 aa24.68■■□□□ 1.54
Smarcc1-201ENSMUST00000088716 Mcmdc2E9Q956 681 aa24.68■■□□□ 1.54
Smarcc1-201ENSMUST00000088716 Ift88Q61371 824 aa24.68■■□□□ 1.54
Smarcc1-201ENSMUST00000088716 Ppp1r10Q80W00 888 aaKnown RBP24.68■■□□□ 1.54
Smarcc1-201ENSMUST00000088716 Slx4ipQ9D7Y9 413 aa24.68■■□□□ 1.54
Smarcc1-201ENSMUST00000088716 AdnpQ9Z103 1108 aaKnown RBP24.68■■□□□ 1.54
Smarcc1-201ENSMUST00000088716 Brd3Q8K2F0 726 aaKnown RBP24.67■■□□□ 1.54
Smarcc1-201ENSMUST00000088716 Ppip5k1A2ARP1 1436 aa24.67■■□□□ 1.54
Smarcc1-201ENSMUST00000088716 Nucb2P81117 420 aa24.67■■□□□ 1.54
Smarcc1-201ENSMUST00000088716 Glg1Q61543 1175 aaKnown RBP24.67■■□□□ 1.54
Smarcc1-201ENSMUST00000088716 Krt15Q61414 452 aa24.67■■□□□ 1.54
Smarcc1-201ENSMUST00000088716 Cavin2Q63918 418 aaKnown RBP24.67■■□□□ 1.54
Smarcc1-201ENSMUST00000088716 Ift122Q6NWV3 1182 aa24.67■■□□□ 1.54
Smarcc1-201ENSMUST00000088716 Vps18Q8R307 973 aa24.67■■□□□ 1.54
Smarcc1-201ENSMUST00000088716 2310002L09RikQ9D7L5 217 aa24.67■■□□□ 1.54
Smarcc1-201ENSMUST00000088716 Cyp2ab1S4R196 498 aa24.67■■□□□ 1.54
Smarcc1-201ENSMUST00000088716 BC005561E9Q5E2 1589 aa24.67■■□□□ 1.54
Smarcc1-201ENSMUST00000088716 Atf7ipQ7TT18 1306 aa24.67■■□□□ 1.54
Smarcc1-201ENSMUST00000088716 Kifc2O08672 792 aa24.66■■□□□ 1.54
Smarcc1-201ENSMUST00000088716 BicraF8VPZ9 1578 aa24.66■■□□□ 1.54
Smarcc1-201ENSMUST00000088716 Aldh8a1Q8BH00 487 aa24.66■■□□□ 1.54
Smarcc1-201ENSMUST00000088716 Xrcc4Q924T3 326 aa24.66■■□□□ 1.54
Smarcc1-201ENSMUST00000088716 Hdhd2Q3UGR5 259 aa24.66■■□□□ 1.54
Smarcc1-201ENSMUST00000088716 Sun3Q5SS91 320 aa24.66■■□□□ 1.54
Smarcc1-201ENSMUST00000088716 Mrpl12Q9DB15 201 aaKnown RBP24.66■■□□□ 1.54
Smarcc1-201ENSMUST00000088716 Atp2b1G5E829 1220 aa24.66■■□□□ 1.54
Smarcc1-201ENSMUST00000088716 Lmod1Q8BVA4 595 aa24.66■■□□□ 1.54
Smarcc1-201ENSMUST00000088716 Ptcd1Q8C2E4 695 aaKnown RBP24.66■■□□□ 1.54
Smarcc1-201ENSMUST00000088716 Ankrd40Q5SUE8 363 aa24.65■■□□□ 1.54
Smarcc1-201ENSMUST00000088716 Skor1Q8BX46 964 aa24.65■■□□□ 1.54
Smarcc1-201ENSMUST00000088716 Pa2g4P50580 394 aaKnown RBP24.65■■□□□ 1.54
Smarcc1-201ENSMUST00000088716 NpcdF8VQB8 469 aa24.65■■□□□ 1.54
Smarcc1-201ENSMUST00000088716 Znf394Q9Z1D9 521 aa24.65■■□□□ 1.54
Smarcc1-201ENSMUST00000088716 Klhl30Q8C3F7 581 aa24.64■■□□□ 1.54
Smarcc1-201ENSMUST00000088716 StambpQ9CQ26 424 aa24.64■■□□□ 1.54
Smarcc1-201ENSMUST00000088716 Brd1E9PZ26 1189 aaKnown RBP24.64■■□□□ 1.54
Smarcc1-201ENSMUST00000088716 Q4VA45 678 aa24.64■■□□□ 1.54
Smarcc1-201ENSMUST00000088716 Plekhg2Q6KAU7 1340 aa24.64■■□□□ 1.54
Smarcc1-201ENSMUST00000088716 BbxQ8VBW5 907 aa24.64■■□□□ 1.54
Smarcc1-201ENSMUST00000088716 GmnnO88513 206 aa24.64■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 Dnajc10Q9DC23 793 aa24.64■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 E9QMW4 1145 aa24.64■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 Als2cr12Q8BVM7 383 aa24.64■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 Pik3ap1Q9EQ32 811 aa24.64■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 Dact3Q0PHV7 610 aa24.63■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 Tmco5aQ9D9D5 303 aa24.63■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 Nsrp1Q5NCR9 542 aa24.63■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 Astn2Q80Z10 1352 aa24.63■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 Gnat2P50149 354 aa24.63■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 Sass6Q80UK7 654 aa24.63■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 P4ha1Q60715 534 aa24.62■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 Neurog2P70447 263 aa24.62■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 Usp37Q8C0R0 979 aa24.62■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 Myl6bQ8CI43 207 aa24.62■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 Exoc1Q8R3S6 894 aa24.62■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 Hdac9Q99N13 588 aa24.62■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 Calm1P0DP26 149 aaKnown RBP24.62■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 Calm2P0DP27 149 aaKnown RBP24.62■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 Calm3P0DP28 149 aaKnown RBP24.62■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 Sde2Q8K1J5 448 aaKnown RBP24.62■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 SfpqQ8VIJ6 699 aaKnown RBP24.62■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 Gm10093D3YYI8 482 aa24.62■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 Hdac1O09106 482 aaKnown RBP24.62■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 Snx13Q6PHS6 957 aa24.61■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 Cyp4f39Q8BGU0 532 aa24.61■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 MarcksP26645 309 aaKnown RBP24.61■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 Nf2P46662 596 aa24.61■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 Syt10Q9R0N4 523 aa24.61■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 AmfrQ9R049 643 aa24.61■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 Zfp853A0A1D5RM95 733 aa24.6■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 Asic1Q6NXK8 526 aa24.6■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 Cfap157Q0VFX2 523 aa24.6■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 RalylQ8BTF8 293 aa24.6■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 Nek11Q8C0Q4 628 aa24.6■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 Sycp2lA0A0M3U1B0 842 aa24.6■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 Spocd1B1ASB6 936 aa24.6■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 Serpinc1P32261 465 aa24.6■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 CebpzP53569 1052 aaKnown RBP24.6■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 Ccdc42Q5SV66 316 aa24.6■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 Pdcd6ipQ9WU78 869 aaKnown RBP24.6■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 Fermt1P59113 677 aa24.6■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 Gse1Q3U3C9 1213 aa24.59■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 Fam186bD3Z420 943 aa24.59■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 Sptlc2P97363 560 aaKnown RBP24.59■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 Emilin2Q8K482 1074 aa24.59■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 Gas8Q60779 478 aa24.59■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 Smarcc2Q6PDG5 1213 aa24.59■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 Shtn1Q8K2Q9 631 aa24.59■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 Ercc3P49135 783 aa24.58■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 Ufl1Q8CCJ3 793 aaKnown RBP24.58■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 Rtn1Q8K0T0 780 aa24.58■■□□□ 1.53
Smarcc1-201ENSMUST00000088716 Trappc8E9PWG2 1437 aa24.58■■□□□ 1.52
Smarcc1-201ENSMUST00000088716 Bicc1Q99MQ1 977 aaKnown RBP24.57■■□□□ 1.52
Smarcc1-201ENSMUST00000088716 Vamp4O70480 141 aa24.57■■□□□ 1.52
Smarcc1-201ENSMUST00000088716 Ano1Q8BHY3 960 aa24.57■■□□□ 1.52
Smarcc1-201ENSMUST00000088716 Psmd1Q3TXS7 953 aa24.57■■□□□ 1.52
Smarcc1-201ENSMUST00000088716 Ak2Q9WTP6 239 aa24.57■■□□□ 1.52
Smarcc1-201ENSMUST00000088716 Sbno1Q689Z5 1390 aa24.57■■□□□ 1.52
Smarcc1-201ENSMUST00000088716 Ddb1Q3U1J4 1140 aaKnown RBP24.57■■□□□ 1.52
Retrieved 100 of 22,080 RNA–protein pairs in 19.6 ms