RNA–Protein interactions for RNA: ENST00000554062.5

PABPN1-204, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 3

Gene PABPN1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-204ENST00000554062 FRMPD4Q14CM0 1322 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 RGPD2P0DJD1 1756 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 IGHV3OR16-10A0A075B7F0 116 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 FAM47DPA6NHR8 397 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 B4DXG7 233 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 SGK1O00141 431 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 IGKV3-20P01619 116 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 IGHV3-9P01782 118 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 CFC1BP0CG36 223 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 CFC1P0CG37 223 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 SLC2A3P11169 496 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 POU2F1P14859 743 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 MX1P20591 662 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 IMPDH1P20839 514 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 LAP3P28838 519 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 NMT1P30419 496 aaKnown RBP3.77□□□□□ -1.81
PABPN1-204ENST00000554062 DHPSP49366 369 aaPredicted RBP3.77□□□□□ -1.81
PABPN1-204ENST00000554062 CCT3P49368 545 aaKnown RBP3.77□□□□□ -1.81
PABPN1-204ENST00000554062 ATP4BP51164 291 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 EFNA3P52797 238 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 ATP12AP54707 1039 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 IRX1P78414 480 aaPredicted RBP3.77□□□□□ -1.81
PABPN1-204ENST00000554062 EWSR1Q01844 656 aaKnown RBP eCLIP3.77□□□□□ -1.81
PABPN1-204ENST00000554062 ZNF33BQ06732 778 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 RAB40BQ12829 278 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 DPYSL2Q16555 572 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 IMMTQ16891 758 aaKnown RBP3.77□□□□□ -1.81
PABPN1-204ENST00000554062 ZNF506Q5JVG8 444 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 SEL1L2Q5TEA6 688 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 FAM219BQ5XKK7 198 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 ZYG11AQ6WRX3 759 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 UTS2BQ765I0 119 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 CLEC4FQ8N1N0 589 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 OR52K2Q8NGK3 314 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 OR4D5Q8NGN0 318 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 PIGCQ92535 297 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 MRPS31Q92665 395 aaKnown RBP3.77□□□□□ -1.81
PABPN1-204ENST00000554062 FBXO32Q969P5 355 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 NT5C3BQ969T7 300 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 TMEM80Q96HE8 168 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 C12orf66Q96MD2 445 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 AMDHD1Q96NU7 426 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 RBM14Q96PK6 669 aaKnown RBP3.77□□□□□ -1.81
PABPN1-204ENST00000554062 NPAS2Q99743 824 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 SLC6A7Q99884 636 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 SYT11Q9BT88 431 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 TMEM121Q9BTD3 319 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 LRRC61Q9BV99 259 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 PARD6BQ9BYG5 372 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 OPN3Q9H1Y3 402 aaPredicted RBP3.77□□□□□ -1.81
PABPN1-204ENST00000554062 ADGRL4Q9HBW9 690 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 TIGARQ9NQ88 270 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 NANSQ9NR45 359 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 SMOXQ9NWM0 555 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 SEC14L3Q9UDX4 400 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 NAALAD2Q9Y3Q0 740 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 NUP188Q5SRE5 1749 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 TNS2Q63HR2 1409 aa3.77□□□□□ -1.81
PABPN1-204ENST00000554062 SMG6Q86US8 1419 aaKnown RBP3.77□□□□□ -1.81
PABPN1-204ENST00000554062 KTN1Q86UP2 1357 aaKnown RBP3.76□□□□□ -1.81
PABPN1-204ENST00000554062 SALL1Q9NSC2 1324 aa3.76□□□□□ -1.81
PABPN1-204ENST00000554062 NHSQ6T4R5 1651 aa3.76□□□□□ -1.81
PABPN1-204ENST00000554062 IGHV3-16A0A0C4DH30 117 aa3.76□□□□□ -1.81
PABPN1-204ENST00000554062 ZNF487B1APH4 448 aa3.76□□□□□ -1.81
PABPN1-204ENST00000554062 F5H6K3 240 aa3.76□□□□□ -1.81
PABPN1-204ENST00000554062 TAPBPO15533 448 aa3.76□□□□□ -1.81
PABPN1-204ENST00000554062 FCMRO60667 390 aa3.76□□□□□ -1.81
PABPN1-204ENST00000554062 B3GAT3O94766 335 aa3.76□□□□□ -1.81
PABPN1-204ENST00000554062 SERPINB2P05120 415 aa3.76□□□□□ -1.81
PABPN1-204ENST00000554062 WNT2P09544 360 aa3.76□□□□□ -1.81
PABPN1-204ENST00000554062 GCFC2P16383 781 aaKnown RBP3.76□□□□□ -1.81
PABPN1-204ENST00000554062 DPEP1P16444 411 aa3.76□□□□□ -1.81
PABPN1-204ENST00000554062 XRCC1P18887 633 aaPredicted RBP3.76□□□□□ -1.81
PABPN1-204ENST00000554062 HPCAL1P37235 193 aa3.76□□□□□ -1.81
PABPN1-204ENST00000554062 TDO2P48775 406 aa3.76□□□□□ -1.81
PABPN1-204ENST00000554062 EFNB2P52799 333 aa3.76□□□□□ -1.81
PABPN1-204ENST00000554062 SUCLG1P53597 346 aaKnown RBP3.76□□□□□ -1.81
PABPN1-204ENST00000554062 KRTAP10-11P60412 298 aa3.76□□□□□ -1.81
PABPN1-204ENST00000554062 KLRC3Q07444 240 aa3.76□□□□□ -1.81
PABPN1-204ENST00000554062 KRTAP1-1Q07627 177 aa3.76□□□□□ -1.81
PABPN1-204ENST00000554062 PUDPQ08623 228 aa3.76□□□□□ -1.81
PABPN1-204ENST00000554062 NDUFA9Q16795 377 aa3.76□□□□□ -1.81
PABPN1-204ENST00000554062 C9orf66Q5T8R8 295 aa3.76□□□□□ -1.81
PABPN1-204ENST00000554062 PVRIGQ6DKI7 326 aa3.76□□□□□ -1.81
PABPN1-204ENST00000554062 ZSCAN25Q6NSZ9 544 aa3.76□□□□□ -1.81
PABPN1-204ENST00000554062 VITQ6UXI7 678 aa3.76□□□□□ -1.81
PABPN1-204ENST00000554062 USP43Q70EL4 1123 aa3.76□□□□□ -1.81
PABPN1-204ENST00000554062 VSTM4Q8IW00 320 aa3.76□□□□□ -1.81
PABPN1-204ENST00000554062 CEP112Q8N8E3 955 aa3.76□□□□□ -1.81
PABPN1-204ENST00000554062 ZNF491Q8N8L2 437 aa3.76□□□□□ -1.81
PABPN1-204ENST00000554062 CSNK1G2-AS1Q8NCQ2 148 aa3.76□□□□□ -1.81
PABPN1-204ENST00000554062 FAM83FQ8NEG4 500 aaPredicted RBP3.76□□□□□ -1.81
PABPN1-204ENST00000554062 MIPOL1Q8TD10 442 aa3.76□□□□□ -1.81
PABPN1-204ENST00000554062 SSC4DQ8WTU2 575 aa3.76□□□□□ -1.81
PABPN1-204ENST00000554062 RNF139Q8WU17 664 aa3.76□□□□□ -1.81
PABPN1-204ENST00000554062 MAIP1Q8WWC4 291 aa3.76□□□□□ -1.81
PABPN1-204ENST00000554062 C18orf25Q96B23 403 aaPredicted RBP3.76□□□□□ -1.81
PABPN1-204ENST00000554062 NTNG2Q96CW9 530 aa3.76□□□□□ -1.81
PABPN1-204ENST00000554062 OR5B2Q96R09 309 aa3.76□□□□□ -1.81
PABPN1-204ENST00000554062 NXF5Q9H1B4 397 aaKnown RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms