RNA–Protein interactions for RNA: ENST00000377080.7

USP11-203, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-203ENST00000377080 CPSF4LA6NMK7 179 aaKnown RBP9.35□□□□□ -0.91
USP11-203ENST00000377080 WASHC1A8K0Z3 465 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 C2CD4DB7Z1M9 353 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 BHLHE40O14503 412 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 RNF13O43567 381 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 PLOD3O60568 738 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 STX11O75558 287 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 TPPPO94811 219 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 MT-ND5P03915 603 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 SERPIND1P05546 499 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 ZNF24P17028 368 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 CELP19835 753 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 NPR2P20594 1047 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 PAICSP22234 425 aaKnown RBP9.35□□□□□ -0.91
USP11-203ENST00000377080 APEX1P27695 318 aaKnown RBP9.35□□□□□ -0.91
USP11-203ENST00000377080 RBMS1P29558 406 aaKnown RBP9.35□□□□□ -0.91
USP11-203ENST00000377080 TALDO1P37837 337 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 MAP3K8P41279 467 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 MC3RP41968 323 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 RBM34P42696 430 aaKnown RBP9.35□□□□□ -0.91
USP11-203ENST00000377080 ZNF136P52737 540 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 KIAA1024LP59773 190 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 DUSP2Q05923 314 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 C19orf57Q0VDD7 668 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 MESP2Q0VG99 397 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 FAPQ12884 760 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 FZD5Q13467 585 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 SUZ12Q15022 739 aaKnown RBP9.35□□□□□ -0.91
USP11-203ENST00000377080 C1QTNF12Q5T7M4 302 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 GARNL3Q5VVW2 1013 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 C18orf63Q68DL7 685 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 SMARCD3Q6STE5 483 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 TMEM91Q6ZNR0 172 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 CREB3L2Q70SY1 520 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 ZNF767PQ75MW2 155 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 CXXC5Q7LFL8 322 aaKnown RBP9.35□□□□□ -0.91
USP11-203ENST00000377080 SZRD1Q7Z422 152 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 PKD1L2Q7Z442 2459 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 ZNF438Q7Z4V0 828 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 LHFPL3Q86UP9 236 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 AMIGO1Q86WK6 493 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 MARCH9Q86YJ5 346 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 GATAD2AQ86YP4 633 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 NKAIN4Q8IVV8 208 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 GHDCQ8N2G8 530 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 ZNF619Q8N2I2 560 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 CAMKK1Q8N5S9 505 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 C12orf76Q8N812 135 aaPredicted RBP9.35□□□□□ -0.91
USP11-203ENST00000377080 DTWD2Q8NBA8 298 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 OR9A2Q8NGT5 310 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 SPRYD4Q8WW59 207 aaPredicted RBP9.35□□□□□ -0.91
USP11-203ENST00000377080 SECISBP2Q96T21 854 aaKnown RBP9.35□□□□□ -0.91
USP11-203ENST00000377080 SDF2Q99470 211 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 C7orf50Q9BRJ6 194 aaKnown RBP9.35□□□□□ -0.91
USP11-203ENST00000377080 TMEM246Q9BRR3 403 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 RNF32Q9H0A6 362 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 MMP28Q9H239 520 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 POLMQ9NP87 494 aaPredicted RBP9.35□□□□□ -0.91
USP11-203ENST00000377080 CMC2Q9NRP2 79 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 IMP3Q9NV31 184 aaKnown RBP9.35□□□□□ -0.91
USP11-203ENST00000377080 SIDT1Q9NXL6 827 aaKnown RBP9.35□□□□□ -0.91
USP11-203ENST00000377080 COPZ2Q9P299 210 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 NUFIP1Q9UHK0 495 aaKnown RBP9.35□□□□□ -0.91
USP11-203ENST00000377080 USP24Q9UPU5 2620 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 SLC35A3Q9Y2D2 325 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 WDR45Q9Y484 360 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 R4GN57 208 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 SPTBN2O15020 2390 aa9.35□□□□□ -0.91
USP11-203ENST00000377080 FRYLO94915 3013 aa9.34□□□□□ -0.91
USP11-203ENST00000377080 FANCMQ8IYD8 2048 aa9.34□□□□□ -0.91
USP11-203ENST00000377080 COL4A2P08572 1712 aa9.34□□□□□ -0.91
USP11-203ENST00000377080 ANKRD34BA5PLL1 514 aa9.34□□□□□ -0.91
USP11-203ENST00000377080 C4orf51C9J302 202 aa9.34□□□□□ -0.91
USP11-203ENST00000377080 PPM1DO15297 605 aa9.34□□□□□ -0.91
USP11-203ENST00000377080 PLRG1O43660 514 aaKnown RBP9.34□□□□□ -0.91
USP11-203ENST00000377080 FCMRO60667 390 aa9.34□□□□□ -0.91
USP11-203ENST00000377080 HPGDSO60760 199 aa9.34□□□□□ -0.91
USP11-203ENST00000377080 PTP4A3O75365 173 aa9.34□□□□□ -0.91
USP11-203ENST00000377080 SC5DO75845 299 aa9.34□□□□□ -0.91
USP11-203ENST00000377080 LYPD3O95274 346 aa9.34□□□□□ -0.91
USP11-203ENST00000377080 LALBAP00709 142 aa9.34□□□□□ -0.91
USP11-203ENST00000377080 SERPINA3P01011 423 aa9.34□□□□□ -0.91
USP11-203ENST00000377080 THY1P04216 161 aa9.34□□□□□ -0.91
USP11-203ENST00000377080 ATP1B1P05026 303 aa9.34□□□□□ -0.91
USP11-203ENST00000377080 APODP05090 189 aa9.34□□□□□ -0.91
USP11-203ENST00000377080 CHRM5P08912 532 aaPredicted RBP9.34□□□□□ -0.91
USP11-203ENST00000377080 PEPDP12955 493 aa9.34□□□□□ -0.91
USP11-203ENST00000377080 NID1P14543 1247 aa9.34□□□□□ -0.91
USP11-203ENST00000377080 AZGP1P25311 298 aaKnown RBP9.34□□□□□ -0.91
USP11-203ENST00000377080 CERS1P27544 350 aa9.34□□□□□ -0.91
USP11-203ENST00000377080 PEBP1P30086 187 aaKnown RBP9.34□□□□□ -0.91
USP11-203ENST00000377080 SLC6A1P30531 599 aa9.34□□□□□ -0.91
USP11-203ENST00000377080 GJA4P35212 333 aa9.34□□□□□ -0.91
USP11-203ENST00000377080 ATP6V1E1P36543 226 aa9.34□□□□□ -0.91
USP11-203ENST00000377080 PDX1P52945 283 aa9.34□□□□□ -0.91
USP11-203ENST00000377080 NKX2-5P52952 324 aaPredicted RBP9.34□□□□□ -0.91
USP11-203ENST00000377080 RRAS2P62070 204 aaPredicted RBP9.34□□□□□ -0.91
USP11-203ENST00000377080 BTN3A2P78410 334 aa9.34□□□□□ -0.91
USP11-203ENST00000377080 LSM11P83369 360 aaKnown RBP eCLIP9.34□□□□□ -0.91
USP11-203ENST00000377080 PITPNAQ00169 270 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms