RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B HRQ1Q05549 1077 aa1.57□□□□□ -2.16
snR39BsnR39B SGO1Q08490 590 aa1.57□□□□□ -2.16
snR39BsnR39B MSC6Q08818 692 aaKnown RBP1.57□□□□□ -2.16
snR39BsnR39B RLF2Q12495 606 aa1.57□□□□□ -2.16
snR39BsnR39B YLR149CQ99296 730 aa1.57□□□□□ -2.16
snR39BsnR39B VPS34P22543 875 aa1.56□□□□□ -2.16
snR39BsnR39B SEC20P28791 383 aa1.56□□□□□ -2.16
snR39BsnR39B NGG1P32494 702 aa1.56□□□□□ -2.16
snR39BsnR39B CBR1P38626 284 aaKnown RBP1.56□□□□□ -2.16
snR39BsnR39B RPP1P38786 293 aa1.56□□□□□ -2.16
snR39BsnR39B YJL206CP39529 758 aa1.56□□□□□ -2.16
snR39BsnR39B YEL020CP39994 560 aa1.56□□□□□ -2.16
snR39BsnR39B SDP1P40479 209 aa1.56□□□□□ -2.16
snR39BsnR39B GYP7P48365 746 aa1.56□□□□□ -2.16
snR39BsnR39B HSV2P50079 448 aaPredicted RBP1.56□□□□□ -2.16
snR39BsnR39B YAP1802P53309 568 aa1.56□□□□□ -2.16
snR39BsnR39B SLK19Q08581 821 aaKnown RBP1.56□□□□□ -2.16
snR39BsnR39B INO1P11986 533 aa1.55□□□□□ -2.16
snR39BsnR39B SCT1P32784 759 aa1.55□□□□□ -2.16
snR39BsnR39B PIN4P34217 668 aaKnown RBP RIP-Chip data1.55□□□□□ -2.16not detected
snR39BsnR39B YIR042CP40586 236 aa1.55□□□□□ -2.16
snR39BsnR39B FKH2P41813 862 aa1.55□□□□□ -2.16
snR39BsnR39B NAB6Q03735 1134 aaKnown RBP RIP-Chip data1.55□□□□□ -2.16not detected
snR39BsnR39B YPL066WQ12194 479 aa1.55□□□□□ -2.16
snR39BsnR39B TAF3Q12297 353 aa1.55□□□□□ -2.16
snR39BsnR39B NOT3P06102 836 aaKnown RBP1.54□□□□□ -2.16
snR39BsnR39B FBP1P09201 348 aa1.54□□□□□ -2.16
snR39BsnR39B NOP1P15646 327 aaKnown RBP1.54□□□□□ -2.16
snR39BsnR39B CDC48P25694 835 aaKnown RBP1.54□□□□□ -2.16
snR39BsnR39B STE13P33894 931 aa1.54□□□□□ -2.16
snR39BsnR39B YBR053CP38235 358 aa1.54□□□□□ -2.16
snR39BsnR39B CTF8P38877 133 aa1.54□□□□□ -2.16
snR39BsnR39B PAC2P39937 518 aa1.54□□□□□ -2.16
snR39BsnR39B FMP52P40008 231 aa1.54□□□□□ -2.16
snR39BsnR39B MEP2P41948 499 aa1.54□□□□□ -2.16
snR39BsnR39B YGL176CP46945 554 aa1.54□□□□□ -2.16
snR39BsnR39B TEL2P53038 688 aa1.54□□□□□ -2.16
snR39BsnR39B YGR053CP53234 283 aa1.54□□□□□ -2.16
snR39BsnR39B SFB2P53953 876 aa1.54□□□□□ -2.16
snR39BsnR39B SPO20Q04359 397 aa1.54□□□□□ -2.16
snR39BsnR39B PGK1P00560 416 aaKnown RBP1.53□□□□□ -2.16
snR39BsnR39B TRP2P00899 507 aaKnown RBP1.53□□□□□ -2.16
snR39BsnR39B STE4P18851 423 aa1.53□□□□□ -2.16
snR39BsnR39B CDC12P32468 407 aaKnown RBP1.53□□□□□ -2.16
snR39BsnR39B MGE1P38523 228 aa1.53□□□□□ -2.16
snR39BsnR39B RPS26AP39938 119 aaKnown RBP1.53□□□□□ -2.16
snR39BsnR39B RPS26BP39939 119 aaKnown RBP1.53□□□□□ -2.16
snR39BsnR39B RSP5P39940 809 aaKnown RBP1.53□□□□□ -2.16
snR39BsnR39B MRK1P50873 501 aa1.53□□□□□ -2.16
snR39BsnR39B TYW3P53177 273 aa1.53□□□□□ -2.16
snR39BsnR39B SMX3P54999 86 aaPredicted RBP1.53□□□□□ -2.16
snR39BsnR39B PKH1Q03407 766 aa1.53□□□□□ -2.16
snR39BsnR39B TDA9Q04545 1251 aa1.53□□□□□ -2.16
snR39BsnR39B ESF1Q06344 628 aaKnown RBP1.53□□□□□ -2.16
snR39BsnR39B TUB3P09734 445 aaKnown RBP1.52□□□□□ -2.17
snR39BsnR39B LAT1P12695 482 aaKnown RBP1.52□□□□□ -2.17
snR39BsnR39B TYE7P33122 291 aaPredicted RBP1.52□□□□□ -2.17
snR39BsnR39B DUT1P33317 147 aa1.52□□□□□ -2.17
snR39BsnR39B HIS7P33734 552 aaKnown RBP1.52□□□□□ -2.17
snR39BsnR39B GLG1P36143 616 aa1.52□□□□□ -2.17
snR39BsnR39B YBR238CP38330 731 aaKnown RBP1.52□□□□□ -2.17
snR39BsnR39B YHR078WP38799 552 aa1.52□□□□□ -2.17
snR39BsnR39B YIL108WP40483 696 aaKnown RBP1.52□□□□□ -2.17
snR39BsnR39B XBP1P40489 647 aa1.52□□□□□ -2.17
snR39BsnR39B CTR1P49573 406 aa1.52□□□□□ -2.17
snR39BsnR39B ATG11Q12527 1178 aa1.52□□□□□ -2.17
snR39BsnR39B MCM2P29469 868 aa1.51□□□□□ -2.17
snR39BsnR39B SPC29P33419 253 aa1.51□□□□□ -2.17
snR39BsnR39B SSF1P38789 453 aaPredicted RBP1.51□□□□□ -2.17
snR39BsnR39B REV7P38927 245 aa1.51□□□□□ -2.17
snR39BsnR39B BDH2P39713 417 aa1.51□□□□□ -2.17
snR39BsnR39B ARG2P40360 574 aa1.51□□□□□ -2.17
snR39BsnR39B NDC80P40460 691 aa1.51□□□□□ -2.17
snR39BsnR39B YKE2P52553 114 aa1.51□□□□□ -2.17
snR39BsnR39B EEB1Q02891 456 aa1.51□□□□□ -2.17
snR39BsnR39B SSL1Q04673 461 aaPredicted RBP1.51□□□□□ -2.17
snR39BsnR39B IRC13Q08630 104 aa1.51□□□□□ -2.17
snR39BsnR39B OSW1Q08692 278 aa1.51□□□□□ -2.17
snR39BsnR39B CIR2Q08822 631 aa1.51□□□□□ -2.17
snR39BsnR39B MPH2P0CD99 609 aa1.5□□□□□ -2.17
snR39BsnR39B ERG11P10614 530 aa1.5□□□□□ -2.17
snR39BsnR39B CLN2P20438 545 aa1.5□□□□□ -2.17
snR39BsnR39B RFA1P22336 621 aaKnown RBP1.5□□□□□ -2.17
snR39BsnR39B EMP70P32802 667 aa1.5□□□□□ -2.17
snR39BsnR39B MOT2P34909 587 aaKnown RBP1.5□□□□□ -2.17
snR39BsnR39B TSL1P38427 1098 aaKnown RBP1.5□□□□□ -2.17
snR39BsnR39B HRB1P38922 454 aaKnown RBP RIP-Chip data1.5□□□□□ -2.17not detected
snR39BsnR39B VHR1P40522 640 aa1.5□□□□□ -2.17
snR39BsnR39B ASI2P53895 289 aa1.5□□□□□ -2.17
snR39BsnR39B YPL068CQ02749 293 aa1.5□□□□□ -2.17
snR39BsnR39B NRG1Q03125 231 aa1.5□□□□□ -2.17
snR39BsnR39B RMD1Q03441 430 aa1.5□□□□□ -2.17
snR39BsnR39B CCR4P31384 837 aaKnown RBP1.49□□□□□ -2.17
snR39BsnR39B PZF1P39933 429 aa1.49□□□□□ -2.17
snR39BsnR39B CCT7P42943 550 aaKnown RBP1.49□□□□□ -2.17
snR39BsnR39B UBC9P50623 157 aaPredicted RBP1.49□□□□□ -2.17
snR39BsnR39B TPO2P53283 614 aa1.49□□□□□ -2.17
snR39BsnR39B YKR011CQ02209 353 aa1.49□□□□□ -2.17
snR39BsnR39B DUS3Q06053 668 aaKnown RBP1.49□□□□□ -2.17
snR39BsnR39B NEW1Q08972 1196 aaKnown RBP1.49□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms