RNA–Protein interactions for RNA: YPL147W

PXA1, Transcript of Subunit of a heterodimeric peroxisomal ABC transport complex, yeast

Gene PXA1, Length 2,613 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PXA1	YPL147W	HLJ1	P48353	224 aa		5.25	□□□□□ -1.57
PXA1	YPL147W	SPR28	Q04921	423 aa		5.25	□□□□□ -1.57
PXA1	YPL147W	PHO92	Q06390	306 aa		5.25	□□□□□ -1.57
PXA1	YPL147W	TYW1	Q08960	810 aa	Known RBP	5.25	□□□□□ -1.57
PXA1	YPL147W	ADF1	Q2V2Q1	113 aa		5.25	□□□□□ -1.57
PXA1	YPL147W	FRT1	Q99332	602 aa		5.25	□□□□□ -1.57
PXA1	YPL147W	VPS17	P32913	551 aa		5.24	□□□□□ -1.57
PXA1	YPL147W	MRP8	P35719	219 aa		5.24	□□□□□ -1.57
PXA1	YPL147W	RSC30	P38781	883 aa		5.24	□□□□□ -1.57
PXA1	YPL147W	YIR014W	P40570	242 aa		5.24	□□□□□ -1.57
PXA1	YPL147W	CNN1	P43618	361 aa		5.24	□□□□□ -1.57
PXA1	YPL147W	LIA1	P47120	325 aa	Known RBP	5.24	□□□□□ -1.57
PXA1	YPL147W	YNL108C	P53929	270 aa		5.24	□□□□□ -1.57
PXA1	YPL147W	YKU80	Q04437	629 aa		5.24	□□□□□ -1.57
PXA1	YPL147W	HSH49	Q99181	213 aa	Predicted RBP	5.24	□□□□□ -1.57
PXA1	YPL147W	PUP2	P32379	260 aa		5.24	□□□□□ -1.57
PXA1	YPL147W	TFB1	P32776	642 aa		5.24	□□□□□ -1.57
PXA1	YPL147W	ORC2	P32833	620 aa		5.24	□□□□□ -1.57
PXA1	YPL147W	GGA2	P38817	585 aa	Known RBP	5.24	□□□□□ -1.57
PXA1	YPL147W	TOM71	P38825	639 aa	Known RBP	5.24	□□□□□ -1.57
PXA1	YPL147W	ILV3	P39522	585 aa	Known RBP	5.24	□□□□□ -1.57
PXA1	YPL147W	SBE2	P42223	864 aa	Known RBP	5.24	□□□□□ -1.57
PXA1	YPL147W	BNA1	P47096	177 aa		5.24	□□□□□ -1.57
PXA1	YPL147W	YGR237C	P50089	785 aa		5.24	□□□□□ -1.57
PXA1	YPL147W	YML6	P51998	286 aa		5.24	□□□□□ -1.57
PXA1	YPL147W	EAF7	P53911	425 aa	Known RBP	5.24	□□□□□ -1.57
PXA1	YPL147W	LOT6	Q07923	191 aa		5.24	□□□□□ -1.57
PXA1	YPL147W	RRG1	Q12167	365 aa	Predicted RBP	5.24	□□□□□ -1.57
PXA1	YPL147W	LSO2	Q3E772	92 aa	Known RBP	5.24	□□□□□ -1.57
PXA1	YPL147W	MRP7	P12687	371 aa		5.23	□□□□□ -1.57
PXA1	YPL147W	MCM10	P32354	571 aa		5.23	□□□□□ -1.57
PXA1	YPL147W	NUF2	P33895	451 aa		5.23	□□□□□ -1.57
PXA1	YPL147W	UBP11	P36026	717 aa		5.23	□□□□□ -1.57
PXA1	YPL147W	BAP2	P38084	609 aa		5.23	□□□□□ -1.57
PXA1	YPL147W	AIP1	P46680	615 aa	Known RBP	5.23	□□□□□ -1.57
PXA1	YPL147W	YJR120W	P47157	116 aa		5.23	□□□□□ -1.57
PXA1	YPL147W	RNR4	P49723	345 aa	Known RBP	5.23	□□□□□ -1.57
PXA1	YPL147W	LSB1	P53281	241 aa		5.23	□□□□□ -1.57
PXA1	YPL147W	ALO1	P54783	526 aa	Known RBP	5.23	□□□□□ -1.57
PXA1	YPL147W	MET14	Q02196	202 aa		5.23	□□□□□ -1.57
PXA1	YPL147W	SLP1	Q12232	587 aa		5.23	□□□□□ -1.57
PXA1	YPL147W	OSH2	Q12451	1283 aa		5.23	□□□□□ -1.57
PXA1	YPL147W	RTC1	Q08281	1341 aa		5.23	□□□□□ -1.57
PXA1	YPL147W	PDI1	P17967	522 aa	Known RBP	5.23	□□□□□ -1.57
PXA1	YPL147W	PRP28	P23394	588 aa		5.23	□□□□□ -1.57
PXA1	YPL147W	SLX5	P32828	619 aa	Known RBP	5.23	□□□□□ -1.57
PXA1	YPL147W	LOT5	P34234	306 aa		5.23	□□□□□ -1.57
PXA1	YPL147W	YPT52	P36018	234 aa	Known RBP	5.23	□□□□□ -1.57
PXA1	YPL147W	STV1	P37296	890 aa		5.23	□□□□□ -1.57
PXA1	YPL147W	FYV10	P40492	516 aa		5.23	□□□□□ -1.57
PXA1	YPL147W	CCT7	P42943	550 aa	Known RBP	5.23	□□□□□ -1.57
PXA1	YPL147W	SAP4	P53036	818 aa		5.23	□□□□□ -1.57
PXA1	YPL147W	TIM50	Q02776	476 aa		5.23	□□□□□ -1.57
PXA1	YPL147W	PPM2	Q08282	695 aa		5.23	□□□□□ -1.57
PXA1	YPL147W	LAM4	P38800	1345 aa		5.23	□□□□□ -1.57
PXA1	YPL147W	YRF1-4	O13559	1382 aa		5.22	□□□□□ -1.57
PXA1	YPL147W	YML133C	Q03099	1374 aa		5.22	□□□□□ -1.57
PXA1	YPL147W	YLL067C	Q07888	1374 aa		5.22	□□□□□ -1.57
PXA1	YPL147W	YLL066C	Q99208	1374 aa		5.22	□□□□□ -1.57
PXA1	YPL147W	HCA4	P20448	770 aa	Known RBP	5.22	□□□□□ -1.57
PXA1	YPL147W	DMC1	P25453	334 aa		5.22	□□□□□ -1.57
PXA1	YPL147W	MGM1	P32266	881 aa		5.22	□□□□□ -1.57
PXA1	YPL147W	PPQ1	P32945	549 aa		5.22	□□□□□ -1.57
PXA1	YPL147W	TAF5	P38129	798 aa		5.22	□□□□□ -1.57
PXA1	YPL147W	UBS1	P38290	277 aa		5.22	□□□□□ -1.57
PXA1	YPL147W	SEC28	P40509	296 aa	Known RBP	5.22	□□□□□ -1.57
PXA1	YPL147W	PMT3	P47190	753 aa		5.22	□□□□□ -1.57
PXA1	YPL147W	ALT1	P52893	592 aa		5.22	□□□□□ -1.57
PXA1	YPL147W	PIP2	P52960	996 aa		5.22	□□□□□ -1.57
PXA1	YPL147W	MIG2	P53035	382 aa		5.22	□□□□□ -1.57
PXA1	YPL147W	PML39	Q03760	334 aa		5.22	□□□□□ -1.57
PXA1	YPL147W	YLR287C	Q05881	355 aa		5.22	□□□□□ -1.57
PXA1	YPL147W	NOP6	Q07623	225 aa	Known RBP	5.22	□□□□□ -1.57
PXA1	YPL147W	CKA2	P19454	339 aa		5.22	□□□□□ -1.57
PXA1	YPL147W	YME2	P32843	850 aa		5.22	□□□□□ -1.57
PXA1	YPL147W	TGL4	P36165	910 aa		5.22	□□□□□ -1.57
PXA1	YPL147W	MAK5	P38112	773 aa	Predicted RBP	5.22	□□□□□ -1.57
PXA1	YPL147W	POP7	P38291	140 aa		5.22	□□□□□ -1.57
PXA1	YPL147W	PAN5	P38787	379 aa		5.22	□□□□□ -1.57
PXA1	YPL147W	LRP1	P38801	184 aa	Known RBP	5.22	□□□□□ -1.57
PXA1	YPL147W	RTC3	P38804	111 aa	Predicted RBP	5.22	□□□□□ -1.57
PXA1	YPL147W	ABM1	P47146	123 aa		5.22	□□□□□ -1.57
PXA1	YPL147W	RTN1	Q04947	295 aa	Known RBP	5.22	□□□□□ -1.57
PXA1	YPL147W	PUS5	Q06244	254 aa		5.22	□□□□□ -1.57
PXA1	YPL147W	YDR056C	Q12025	205 aa		5.22	□□□□□ -1.57
PXA1	YPL147W	SPO21	Q12411	609 aa		5.22	□□□□□ -1.57
PXA1	YPL147W	AHC1	Q12433	566 aa		5.22	□□□□□ -1.57
PXA1	YPL147W	TRP2	P00899	507 aa	Known RBP	5.21	□□□□□ -1.58
PXA1	YPL147W	APD1	P38281	316 aa		5.21	□□□□□ -1.58
PXA1	YPL147W	PKP1	P40530	394 aa		5.21	□□□□□ -1.58
PXA1	YPL147W	CWH41	P53008	833 aa		5.21	□□□□□ -1.58
PXA1	YPL147W	MLC1	P53141	149 aa		5.21	□□□□□ -1.58
PXA1	YPL147W	YNL193W	P53870	558 aa		5.21	□□□□□ -1.58
PXA1	YPL147W	RPM2	Q02773	1202 aa		5.21	□□□□□ -1.58
PXA1	YPL147W	PRP42	Q03776	544 aa	Known RBP	5.21	□□□□□ -1.58
PXA1	YPL147W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	5.21	□□□□□ -1.58	not detected
PXA1	YPL147W	TSR3	Q12094	313 aa	Known RBP	5.21	□□□□□ -1.58
PXA1	YPL147W	CDC19	P00549	500 aa	Known RBP	5.21	□□□□□ -1.58
PXA1	YPL147W	OM45	P16547	393 aa		5.21	□□□□□ -1.58
PXA1	YPL147W	VPS1	P21576	704 aa	Known RBP	5.21	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 82.4 ms