RNA–Protein interactions for RNA: YOR291W

YPK9, Transcript of Vacuolar protein with a possible role in sequestering heavy metals, yeast

Gene YPK9, Length 4,419 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPK9	YOR291W	HTZ1	Q12692	134 aa	Known RBP	4.38	□□□□□ -1.71
YPK9	YOR291W	ENO1	P00924	437 aa	Known RBP	4.38	□□□□□ -1.71
YPK9	YOR291W	SNA3	P14359	133 aa		4.38	□□□□□ -1.71
YPK9	YOR291W	YKR015C	P36111	568 aa		4.38	□□□□□ -1.71
YPK9	YOR291W	CAB2	P40506	365 aa		4.38	□□□□□ -1.71
YPK9	YOR291W	TDA10	P42938	290 aa		4.38	□□□□□ -1.71
YPK9	YOR291W	TEL2	P53038	688 aa		4.38	□□□□□ -1.71
YPK9	YOR291W	SPO71	Q03868	1245 aa		4.38	□□□□□ -1.71
YPK9	YOR291W	TAF9	Q05027	157 aa		4.38	□□□□□ -1.71
YPK9	YOR291W	SEC10	Q06245	871 aa		4.38	□□□□□ -1.71
YPK9	YOR291W	YPR078C	Q06813	372 aa		4.38	□□□□□ -1.71
YPK9	YOR291W	REP1	P03871	373 aa		4.37	□□□□□ -1.71
YPK9	YOR291W	HIR2	P32480	875 aa		4.37	□□□□□ -1.71
YPK9	YOR291W	KIC1	P38692	1080 aa		4.37	□□□□□ -1.71
YPK9	YOR291W	SSP1	P38871	571 aa		4.37	□□□□□ -1.71
YPK9	YOR291W	YEL023C	P39992	682 aa		4.37	□□□□□ -1.71
YPK9	YOR291W	SIP5	P40210	489 aa	Known RBP	4.37	□□□□□ -1.71
YPK9	YOR291W	LSC1	P53598	329 aa	Known RBP	4.37	□□□□□ -1.71
YPK9	YOR291W	HPC2	Q01448	625 aa		4.37	□□□□□ -1.71
YPK9	YOR291W	FUS2	Q05670	677 aa		4.37	□□□□□ -1.71
YPK9	YOR291W	NSE1	Q07913	336 aa		4.37	□□□□□ -1.71
YPK9	YOR291W	SIL1	Q08199	421 aa		4.37	□□□□□ -1.71
YPK9	YOR291W	NEW1	Q08972	1196 aa	Known RBP	4.37	□□□□□ -1.71
YPK9	YOR291W	TIP41	Q12199	356 aa		4.37	□□□□□ -1.71
YPK9	YOR291W	TUF1	P02992	437 aa	Known RBP	4.37	□□□□□ -1.71
YPK9	YOR291W	ALG5	P40350	334 aa		4.37	□□□□□ -1.71
YPK9	YOR291W	ALG2	P43636	503 aa		4.37	□□□□□ -1.71
YPK9	YOR291W	RMR1	P53060	241 aa		4.37	□□□□□ -1.71
YPK9	YOR291W	YLR407W	Q06070	228 aa		4.37	□□□□□ -1.71
YPK9	YOR291W	DAS2	Q12084	232 aa		4.37	□□□□□ -1.71
YPK9	YOR291W	SSK22	P25390	1331 aa	Predicted RBP	4.37	□□□□□ -1.71
YPK9	YOR291W	CBP3	P21560	335 aa		4.37	□□□□□ -1.71
YPK9	YOR291W	SNT1	P25357	1226 aa		4.37	□□□□□ -1.71
YPK9	YOR291W	GGA2	P38817	585 aa	Known RBP	4.37	□□□□□ -1.71
YPK9	YOR291W	MSN5	P52918	1224 aa		4.37	□□□□□ -1.71
YPK9	YOR291W	CUE3	P53137	624 aa	Known RBP	4.37	□□□□□ -1.71
YPK9	YOR291W	PIB2	P53191	635 aa		4.37	□□□□□ -1.71
YPK9	YOR291W	UBX4	P54730	416 aa		4.37	□□□□□ -1.71
YPK9	YOR291W	USA1	Q03714	838 aa		4.37	□□□□□ -1.71
YPK9	YOR291W	RSM24	Q03976	319 aa		4.37	□□□□□ -1.71
YPK9	YOR291W	YAP7	Q08182	245 aa		4.37	□□□□□ -1.71
YPK9	YOR291W	CWC2	Q12046	339 aa	Predicted RBP	4.37	□□□□□ -1.71
YPK9	YOR291W	CEX1	Q12453	761 aa		4.37	□□□□□ -1.71
YPK9	YOR291W	ADF1	Q2V2Q1	113 aa		4.37	□□□□□ -1.71
YPK9	YOR291W	SSC1	P0CS90	654 aa	Known RBP	4.37	□□□□□ -1.71
YPK9	YOR291W	BAS1	P22035	811 aa		4.37	□□□□□ -1.71
YPK9	YOR291W	BRL1	P38770	471 aa		4.37	□□□□□ -1.71
YPK9	YOR291W	VMA22	P38784	181 aa		4.37	□□□□□ -1.71
YPK9	YOR291W	JEM1	P40358	645 aa		4.37	□□□□□ -1.71
YPK9	YOR291W	NOP15	P53927	220 aa	Predicted RBP	4.37	□□□□□ -1.71
YPK9	YOR291W	YMR226C	Q05016	267 aa	Known RBP	4.37	□□□□□ -1.71
YPK9	YOR291W	AIM41	Q12032	185 aa		4.37	□□□□□ -1.71
YPK9	YOR291W	RSR1	P13856	272 aa		4.36	□□□□□ -1.71
YPK9	YOR291W	SPO11	P23179	398 aa		4.36	□□□□□ -1.71
YPK9	YOR291W	SEC21	P32074	935 aa	Known RBP	4.36	□□□□□ -1.71
YPK9	YOR291W	GCG1	P32656	232 aa	Known RBP	4.36	□□□□□ -1.71
YPK9	YOR291W	MCD4	P36051	919 aa		4.36	□□□□□ -1.71
YPK9	YOR291W	YBR242W	P38331	238 aa		4.36	□□□□□ -1.71
YPK9	YOR291W	APE4	P38821	490 aa		4.36	□□□□□ -1.71
YPK9	YOR291W	SSP120	P39931	234 aa	Known RBP	4.36	□□□□□ -1.71
YPK9	YOR291W	PSY2	P40164	858 aa		4.36	□□□□□ -1.71
YPK9	YOR291W	ZIP2	P53061	704 aa		4.36	□□□□□ -1.71
YPK9	YOR291W	PPM1	Q04081	328 aa		4.36	□□□□□ -1.71
YPK9	YOR291W	DNL4	Q08387	944 aa	Predicted RBP	4.36	□□□□□ -1.71
YPK9	YOR291W	YPL216W	Q08964	1102 aa		4.36	□□□□□ -1.71
YPK9	YOR291W	RIB2	Q12362	591 aa	Known RBP	4.36	□□□□□ -1.71
YPK9	YOR291W	POM152	P39685	1337 aa		4.36	□□□□□ -1.71
YPK9	YOR291W	CLN2	P20438	545 aa		4.36	□□□□□ -1.71
YPK9	YOR291W	BUD23	P25627	275 aa	Predicted RBP	4.36	□□□□□ -1.71
YPK9	YOR291W	URA1	P28272	314 aa	Predicted RBP	4.36	□□□□□ -1.71
YPK9	YOR291W	SAS3	P34218	831 aa		4.36	□□□□□ -1.71
YPK9	YOR291W	TBS1	P38114	1094 aa		4.36	□□□□□ -1.71
YPK9	YOR291W	CRG1	P38892	291 aa	RIP-Chip data	4.36	□□□□□ -1.71	RIP-Chip
YPK9	YOR291W	RLP7	P40693	322 aa	Known RBP	4.36	□□□□□ -1.71
YPK9	YOR291W	EEB1	Q02891	456 aa		4.36	□□□□□ -1.71
YPK9	YOR291W	PNP1	Q05788	311 aa		4.36	□□□□□ -1.71
YPK9	YOR291W	ECI1	Q05871	280 aa		4.36	□□□□□ -1.71
YPK9	YOR291W	SMD2	Q06217	110 aa	Known RBP	4.36	□□□□□ -1.71
YPK9	YOR291W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.36	□□□□□ -1.71	not detected
YPK9	YOR291W	YPL191C	Q08930	360 aa		4.36	□□□□□ -1.71
YPK9	YOR291W	TAF3	Q12297	353 aa		4.36	□□□□□ -1.71
YPK9	YOR291W	ZIP1	P31111	875 aa		4.36	□□□□□ -1.71
YPK9	YOR291W	RME1	P32338	300 aa	Known RBP	4.36	□□□□□ -1.71
YPK9	YOR291W	KDX1	P36005	433 aa		4.36	□□□□□ -1.71
YPK9	YOR291W	SHM1	P37292	490 aa	Predicted RBP	4.36	□□□□□ -1.71
YPK9	YOR291W	BCD1	P38772	366 aa		4.36	□□□□□ -1.71
YPK9	YOR291W	SWP82	P43554	623 aa		4.36	□□□□□ -1.71
YPK9	YOR291W	YGR266W	P53326	701 aa		4.36	□□□□□ -1.71
YPK9	YOR291W	SMC5	Q08204	1093 aa		4.36	□□□□□ -1.71
YPK9	YOR291W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	4.36	□□□□□ -1.71	not detected
YPK9	YOR291W	UBA1	P22515	1024 aa	Known RBP	4.35	□□□□□ -1.71
YPK9	YOR291W	CNA1	P23287	553 aa		4.35	□□□□□ -1.71
YPK9	YOR291W	SWI4	P25302	1093 aa	Known RBP	4.35	□□□□□ -1.71
YPK9	YOR291W	AAD3	P25612	363 aa		4.35	□□□□□ -1.71
YPK9	YOR291W	DUR3	P33413	735 aa		4.35	□□□□□ -1.71
YPK9	YOR291W	CCL1	P37366	393 aa		4.35	□□□□□ -1.71
YPK9	YOR291W	MAL31	P38156	614 aa		4.35	□□□□□ -1.71
YPK9	YOR291W	FMP33	P46998	180 aa		4.35	□□□□□ -1.71
YPK9	YOR291W	SHR3	Q02774	210 aa		4.35	□□□□□ -1.71
YPK9	YOR291W	CEF1	Q03654	590 aa	Predicted RBP	4.35	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 332.6 ms