RNA–Protein interactions for RNA: YOR260W

GCD1, Transcript of Gamma subunit of the translation initiation factor eIF2B, yeast

Gene GCD1, Length 1,737 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GCD1	YOR260W	MCM6	P53091	1017 aa	Known RBP	4.76	□□□□□ -1.65
GCD1	YOR260W	GSF2	Q04697	403 aa	Known RBP	4.76	□□□□□ -1.65
GCD1	YOR260W	RPP2A	P05319	106 aa	Known RBP	4.75	□□□□□ -1.65
GCD1	YOR260W	HIS5	P07172	385 aa		4.75	□□□□□ -1.65
GCD1	YOR260W	NPP1	P25353	742 aa		4.75	□□□□□ -1.65
GCD1	YOR260W	PWP2	P25635	923 aa	Known RBP	4.75	□□□□□ -1.65
GCD1	YOR260W	SRP101	P32916	621 aa		4.75	□□□□□ -1.65
GCD1	YOR260W	AFR1	P33304	620 aa		4.75	□□□□□ -1.65
GCD1	YOR260W	NOC2	P39744	710 aa	Known RBP	4.75	□□□□□ -1.65
GCD1	YOR260W	FAF1	P40546	346 aa	Predicted RBP	4.75	□□□□□ -1.65
GCD1	YOR260W	ALR2	P43553	858 aa		4.75	□□□□□ -1.65
GCD1	YOR260W	NSE3	Q05541	303 aa		4.75	□□□□□ -1.65
GCD1	YOR260W	BDF2	Q07442	638 aa		4.75	□□□□□ -1.65
GCD1	YOR260W	SNU66	Q12420	587 aa	Predicted RBP	4.75	□□□□□ -1.65
GCD1	YOR260W	ERP4	Q12450	207 aa		4.75	□□□□□ -1.65
GCD1	YOR260W	TCB3	Q03640	1545 aa	Known RBP	4.75	□□□□□ -1.65
GCD1	YOR260W	TUB2	P02557	457 aa	Known RBP	4.75	□□□□□ -1.65
GCD1	YOR260W	RPC82	P32349	654 aa		4.75	□□□□□ -1.65
GCD1	YOR260W	UTP8	P53276	713 aa	Known RBP	4.75	□□□□□ -1.65
GCD1	YOR260W	EAF1	Q06337	982 aa		4.75	□□□□□ -1.65
GCD1	YOR260W	SPE1	P08432	466 aa		4.74	□□□□□ -1.65
GCD1	YOR260W	HSF1	P10961	833 aa		4.74	□□□□□ -1.65
GCD1	YOR260W	YBR284W	P38150	797 aa		4.74	□□□□□ -1.65
GCD1	YOR260W	FUI1	P38196	639 aa		4.74	□□□□□ -1.65
GCD1	YOR260W	CCC2	P38995	1004 aa		4.74	□□□□□ -1.65
GCD1	YOR260W	PLB1	P39105	664 aa		4.74	□□□□□ -1.65
GCD1	YOR260W	GYP7	P48365	746 aa		4.74	□□□□□ -1.65
GCD1	YOR260W	SFB2	P53953	876 aa		4.74	□□□□□ -1.65
GCD1	YOR260W	NKP1	Q12493	238 aa		4.74	□□□□□ -1.65
GCD1	YOR260W	KAR1	P11927	433 aa		4.73	□□□□□ -1.65
GCD1	YOR260W	HCM1	P25364	564 aa		4.73	□□□□□ -1.65
GCD1	YOR260W	ARE1	P25628	610 aa		4.73	□□□□□ -1.65
GCD1	YOR260W	AAR2	P32357	355 aa	Predicted RBP	4.73	□□□□□ -1.65
GCD1	YOR260W	CHA4	P43634	648 aa		4.73	□□□□□ -1.65
GCD1	YOR260W	YJL049W	P47048	450 aa		4.73	□□□□□ -1.65
GCD1	YOR260W	PSP2	P50109	593 aa	Known RBP	4.73	□□□□□ -1.65
GCD1	YOR260W	YGR125W	P53273	1036 aa		4.73	□□□□□ -1.65
GCD1	YOR260W	SPO75	Q07798	868 aa		4.73	□□□□□ -1.65
GCD1	YOR260W	PPH3	P32345	308 aa		4.72	□□□□□ -1.65
GCD1	YOR260W	SEC6	P32844	805 aa		4.72	□□□□□ -1.65
GCD1	YOR260W	MFT1	P33441	392 aa	Known RBP	4.72	□□□□□ -1.65
GCD1	YOR260W	YKR078W	P36158	585 aa	Known RBP	4.72	□□□□□ -1.65
GCD1	YOR260W	TSL1	P38427	1098 aa	Known RBP	4.72	□□□□□ -1.65
GCD1	YOR260W	YER158C	P40095	573 aa		4.72	□□□□□ -1.65
GCD1	YOR260W	FLC1	Q08967	793 aa		4.72	□□□□□ -1.65
GCD1	YOR260W	CDC53	Q12018	815 aa	Known RBP	4.72	□□□□□ -1.65
GCD1	YOR260W	QCR6	P00127	147 aa		4.72	□□□□□ -1.65
GCD1	YOR260W	CIT1	P00890	479 aa		4.72	□□□□□ -1.65
GCD1	YOR260W	TOP3	P13099	656 aa		4.72	□□□□□ -1.65
GCD1	YOR260W	DCG1	P32460	244 aa		4.72	□□□□□ -1.65
GCD1	YOR260W	TRM2	P33753	639 aa		4.72	□□□□□ -1.65
GCD1	YOR260W	YRO2	P38079	344 aa		4.72	□□□□□ -1.65
GCD1	YOR260W	MAL31	P38156	614 aa		4.72	□□□□□ -1.65
GCD1	YOR260W	RSP5	P39940	809 aa	Known RBP	4.72	□□□□□ -1.65
GCD1	YOR260W	NOP2	P40991	618 aa	Known RBP	4.72	□□□□□ -1.65
GCD1	YOR260W	ERP6	P53198	216 aa		4.72	□□□□□ -1.65
GCD1	YOR260W	ENT2	Q05785	613 aa		4.72	□□□□□ -1.65
GCD1	YOR260W	NTO1	Q12311	748 aa		4.72	□□□□□ -1.65
GCD1	YOR260W	YPR071W	Q12346	211 aa		4.72	□□□□□ -1.65
GCD1	YOR260W	HBN1	Q96VH4	193 aa		4.72	□□□□□ -1.65
GCD1	YOR260W	TY1B-DR4	Q07793	1604 aa		4.71	□□□□□ -1.65
GCD1	YOR260W	PMA1	P05030	918 aa	Known RBP	4.71	□□□□□ -1.66
GCD1	YOR260W	PRP9	P19736	530 aa	Known RBP	4.71	□□□□□ -1.66
GCD1	YOR260W	OPI1	P21957	404 aa		4.71	□□□□□ -1.66
GCD1	YOR260W	VPS24	P36095	224 aa	Known RBP	4.71	□□□□□ -1.66
GCD1	YOR260W	SIT1	P39980	628 aa		4.71	□□□□□ -1.66
GCD1	YOR260W	URM1	P40554	99 aa	Predicted RBP	4.71	□□□□□ -1.66
GCD1	YOR260W	BUD6	P41697	788 aa		4.71	□□□□□ -1.66
GCD1	YOR260W	PHO23	P50947	330 aa		4.71	□□□□□ -1.66
GCD1	YOR260W	BUL2	Q03758	920 aa	Known RBP	4.71	□□□□□ -1.66
GCD1	YOR260W	OSH2	Q12451	1283 aa		4.71	□□□□□ -1.66
GCD1	YOR260W	HSP60	P19882	572 aa	Known RBP	4.7	□□□□□ -1.66
GCD1	YOR260W	TRX2	P22803	104 aa	Known RBP	4.7	□□□□□ -1.66
GCD1	YOR260W	SRP40	P32583	406 aa	Predicted RBP	4.7	□□□□□ -1.66
GCD1	YOR260W	ATG19	P35193	415 aa		4.7	□□□□□ -1.66
GCD1	YOR260W	EXG2	P52911	562 aa		4.7	□□□□□ -1.66
GCD1	YOR260W	ESF2	P53743	316 aa	Known RBP	4.7	□□□□□ -1.66
GCD1	YOR260W	PKH1	Q03407	766 aa		4.7	□□□□□ -1.66
GCD1	YOR260W	TAF8	Q03750	510 aa		4.7	□□□□□ -1.66
GCD1	YOR260W	YPR196W	Q06595	470 aa		4.7	□□□□□ -1.66
GCD1	YOR260W	KCS1	Q12494	1050 aa		4.7	□□□□□ -1.66
GCD1	YOR260W	MSD1	P15179	658 aa	Known RBP	4.69	□□□□□ -1.66
GCD1	YOR260W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.69	□□□□□ -1.66	not detected
GCD1	YOR260W	PMI40	P29952	429 aa	Known RBP	4.69	□□□□□ -1.66
GCD1	YOR260W	BET3	P36149	193 aa		4.69	□□□□□ -1.66
GCD1	YOR260W	YBR238C	P38330	731 aa	Known RBP	4.69	□□□□□ -1.66
GCD1	YOR260W	UBP12	P39538	1254 aa		4.69	□□□□□ -1.66
GCD1	YOR260W	PES4	P39684	611 aa		4.69	□□□□□ -1.66
GCD1	YOR260W	YKE2	P52553	114 aa		4.69	□□□□□ -1.66
GCD1	YOR260W	RTA1	P53047	317 aa		4.69	□□□□□ -1.66
GCD1	YOR260W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.69	□□□□□ -1.66	not detected
GCD1	YOR260W	NPC2	Q12408	173 aa		4.69	□□□□□ -1.66
GCD1	YOR260W	VPS5	Q92331	675 aa		4.69	□□□□□ -1.66
GCD1	YOR260W	TY1B-A	O13527	1196 aa	Known RBP	4.69	□□□□□ -1.66
GCD1	YOR260W	ADE8	P04161	214 aa		4.69	□□□□□ -1.66
GCD1	YOR260W	CDC48	P25694	835 aa	Known RBP	4.69	□□□□□ -1.66
GCD1	YOR260W	BLI1	P35727	113 aa		4.69	□□□□□ -1.66
GCD1	YOR260W	TOK1	P40310	691 aa		4.69	□□□□□ -1.66
GCD1	YOR260W	IES1	P43579	692 aa		4.69	□□□□□ -1.66
GCD1	YOR260W	YJR142W	P47173	342 aa		4.69	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms