RNA–Protein interactions for RNA: YOL148C

SPT20, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT20, Length 1,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT20YOL148C FMS1P50264 508 aa10.06□□□□□ -0.8
SPT20YOL148C IST1P53843 298 aaPredicted RBP10.06□□□□□ -0.8
SPT20YOL148C HIF1Q12373 385 aa10.06□□□□□ -0.8
SPT20YOL148C MSB1P21339 1137 aaKnown RBP10.05□□□□□ -0.8
SPT20YOL148C EFT1P32324 842 aaKnown RBP10.05□□□□□ -0.8
SPT20YOL148C MET4P32389 672 aa10.05□□□□□ -0.8
SPT20YOL148C SLA2P33338 968 aa10.05□□□□□ -0.8
SPT20YOL148C GLO3P38682 493 aaKnown RBP10.05□□□□□ -0.8
SPT20YOL148C RBL2P48606 106 aaKnown RBP10.05□□□□□ -0.8
SPT20YOL148C RIM8P53179 542 aa10.05□□□□□ -0.8
SPT20YOL148C YMR187CQ03236 431 aa10.05□□□□□ -0.8
SPT20YOL148C CIR2Q08822 631 aa10.05□□□□□ -0.8
SPT20YOL148C MSH5Q12175 901 aa10.05□□□□□ -0.8
SPT20YOL148C ARG82P07250 355 aa10.05□□□□□ -0.8
SPT20YOL148C RIB7P33312 244 aa10.05□□□□□ -0.8
SPT20YOL148C MRP8P35719 219 aa10.05□□□□□ -0.8
SPT20YOL148C MYO3P36006 1272 aa10.05□□□□□ -0.8
SPT20YOL148C TIF5P38431 405 aaKnown RBP10.05□□□□□ -0.8
SPT20YOL148C PDS1P40316 373 aaPredicted RBP10.05□□□□□ -0.8
SPT20YOL148C CSM2P40465 213 aa10.05□□□□□ -0.8
SPT20YOL148C YGR153WP48238 217 aa10.05□□□□□ -0.8
SPT20YOL148C SHR3Q02774 210 aa10.05□□□□□ -0.8
SPT20YOL148C VIK1Q12045 647 aa10.05□□□□□ -0.8
SPT20YOL148C BUG1Q12191 341 aa10.05□□□□□ -0.8
SPT20YOL148C YLL054CQ12244 843 aa10.05□□□□□ -0.8
SPT20YOL148C CLN3P13365 580 aa10.04□□□□□ -0.8
SPT20YOL148C MIP1P15801 1254 aa10.04□□□□□ -0.8
SPT20YOL148C PHO87P25360 923 aa10.04□□□□□ -0.8
SPT20YOL148C SEC20P28791 383 aa10.04□□□□□ -0.8
SPT20YOL148C KES1P35844 434 aaKnown RBP10.04□□□□□ -0.8
SPT20YOL148C UBP15P50101 1230 aa10.04□□□□□ -0.8
SPT20YOL148C TDA9Q04545 1251 aa10.04□□□□□ -0.8
SPT20YOL148C DON1Q05610 365 aa10.04□□□□□ -0.8
SPT20YOL148C NFI1Q12216 726 aa10.04□□□□□ -0.8
SPT20YOL148C ENO1P00924 437 aaKnown RBP10.03□□□□□ -0.8
SPT20YOL148C MAK16P10962 306 aaPredicted RBP10.03□□□□□ -0.8
SPT20YOL148C SPO16P17122 198 aa10.03□□□□□ -0.8
SPT20YOL148C PET10P36139 283 aa10.03□□□□□ -0.8
SPT20YOL148C ARB1P40024 610 aaKnown RBP10.03□□□□□ -0.8
SPT20YOL148C LCP5P40079 357 aaPredicted RBP10.03□□□□□ -0.8
SPT20YOL148C STB1P42845 420 aa10.03□□□□□ -0.8
SPT20YOL148C TOS3P43637 560 aa10.03□□□□□ -0.8
SPT20YOL148C TAF6P53040 516 aa10.03□□□□□ -0.8
SPT20YOL148C VID30P53076 958 aa10.03□□□□□ -0.8
SPT20YOL148C ALD6P54115 500 aaKnown RBP10.03□□□□□ -0.8
SPT20YOL148C RPL22BP56628 122 aaKnown RBP10.03□□□□□ -0.8
SPT20YOL148C UBP2Q01476 1272 aa10.03□□□□□ -0.8
SPT20YOL148C YKR005CQ02203 525 aa10.03□□□□□ -0.8
SPT20YOL148C YMR196WQ04336 1088 aa10.03□□□□□ -0.8
SPT20YOL148C YMR018WQ04364 514 aa10.03□□□□□ -0.8
SPT20YOL148C ARR1Q06596 294 aa10.03□□□□□ -0.8
SPT20YOL148C TUM1Q08686 304 aaKnown RBP10.03□□□□□ -0.8
SPT20YOL148C SGT2Q12118 346 aaKnown RBP10.03□□□□□ -0.8
SPT20YOL148C TAF3Q12297 353 aa10.03□□□□□ -0.8
SPT20YOL148C SBP1P10080 294 aaKnown RBP10.03□□□□□ -0.8
SPT20YOL148C MLS1P30952 554 aa10.03□□□□□ -0.8
SPT20YOL148C RPN2P32565 945 aaKnown RBP10.03□□□□□ -0.8
SPT20YOL148C BLI1P35727 113 aa10.03□□□□□ -0.8
SPT20YOL148C RFC3P38629 340 aa10.03□□□□□ -0.8
SPT20YOL148C YFR006WP43590 535 aa10.03□□□□□ -0.8
SPT20YOL148C FMP33P46998 180 aa10.03□□□□□ -0.8
SPT20YOL148C YLR462WO13556 202 aa10.02□□□□□ -0.81
SPT20YOL148C CYB2P00175 591 aa10.02□□□□□ -0.81
SPT20YOL148C PEP5P12868 1029 aa10.02□□□□□ -0.81
SPT20YOL148C KIP2P28743 706 aa10.02□□□□□ -0.81
SPT20YOL148C BUD2P33314 1104 aa10.02□□□□□ -0.81
SPT20YOL148C VPS35P34110 944 aa10.02□□□□□ -0.81
SPT20YOL148C YBR032WP38223 100 aa10.02□□□□□ -0.81
SPT20YOL148C FES1P38260 290 aa10.02□□□□□ -0.81
SPT20YOL148C YHL049CP38722 271 aa10.02□□□□□ -0.81
SPT20YOL148C YEL075CP39972 122 aa10.02□□□□□ -0.81
SPT20YOL148C YER189WP40104 122 aa10.02□□□□□ -0.81
SPT20YOL148C HXT8P40886 569 aa10.02□□□□□ -0.81
SPT20YOL148C YFL064CP43540 174 aa10.02□□□□□ -0.81
SPT20YOL148C SYH1Q02875 849 aaKnown RBP10.02□□□□□ -0.81
SPT20YOL148C HMO1Q03973 246 aaKnown RBP10.02□□□□□ -0.81
SPT20YOL148C TOS4Q06266 489 aa10.02□□□□□ -0.81
SPT20YOL148C NSE1Q07913 336 aa10.02□□□□□ -0.81
SPT20YOL148C YBL111CQ3E7Y5 667 aa10.02□□□□□ -0.81
SPT20YOL148C YPT6Q99260 215 aa10.02□□□□□ -0.81
SPT20YOL148C CIT1P00890 479 aa10.01□□□□□ -0.81
SPT20YOL148C STI1P15705 589 aaKnown RBP RIP-Chip data10.01□□□□□ -0.81not detected
SPT20YOL148C GCD6P32501 712 aaKnown RBP10.01□□□□□ -0.81
SPT20YOL148C ZIP2P53061 704 aa10.01□□□□□ -0.81
SPT20YOL148C ORM1P53224 222 aa10.01□□□□□ -0.81
SPT20YOL148C RPM2Q02773 1202 aa10.01□□□□□ -0.81
SPT20YOL148C FRK1Q03002 865 aaPredicted RBP10.01□□□□□ -0.81
SPT20YOL148C ILV2P07342 687 aaKnown RBP10□□□□□ -0.81
SPT20YOL148C URA4P20051 364 aa10□□□□□ -0.81
SPT20YOL148C KIP1P28742 1111 aa10□□□□□ -0.81
SPT20YOL148C EUG1P32474 517 aa10□□□□□ -0.81
SPT20YOL148C AST1P35183 429 aa10□□□□□ -0.81
SPT20YOL148C MMS21P38632 267 aa10□□□□□ -0.81
SPT20YOL148C RPA14P50106 137 aa10□□□□□ -0.81
SPT20YOL148C TEL2P53038 688 aa10□□□□□ -0.81
SPT20YOL148C ATG1P53104 897 aa10□□□□□ -0.81
SPT20YOL148C MTG1Q03151 367 aaPredicted RBP10□□□□□ -0.81
SPT20YOL148C NOP56Q12460 504 aaKnown RBP RIP-Chip data10□□□□□ -0.81not detected
SPT20YOL148C RAM2P29703 316 aa10□□□□□ -0.81
SPT20YOL148C TFC4P33339 1025 aa10□□□□□ -0.81
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms