RNA–Protein interactions for RNA: YNR050C

LYS9, Transcript of Saccharopine dehydrogenase (NADP+, L-glutamate-forming), yeast

Gene LYS9, Length 1,341 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LYS9	YNR050C	CDC12	P32468	407 aa	Known RBP	3.14	□□□□□ -1.91
LYS9	YNR050C	GYP7	P48365	746 aa		3.14	□□□□□ -1.91
LYS9	YNR050C	TYW3	P53177	273 aa		3.14	□□□□□ -1.91
LYS9	YNR050C	TUB3	P09734	445 aa	Known RBP	3.13	□□□□□ -1.91
LYS9	YNR050C	YJR107W	P47145	328 aa		3.13	□□□□□ -1.91
LYS9	YNR050C	SNU71	P53207	620 aa	Known RBP	3.13	□□□□□ -1.91
LYS9	YNR050C	SSL1	Q04673	461 aa	Predicted RBP	3.13	□□□□□ -1.91
LYS9	YNR050C	MET5	P47169	1442 aa		3.13	□□□□□ -1.91
LYS9	YNR050C	MMS1	Q06211	1407 aa		3.13	□□□□□ -1.91
LYS9	YNR050C	YCF1	P39109	1515 aa	Known RBP	3.12	□□□□□ -1.91
LYS9	YNR050C	MET6	P05694	767 aa	Known RBP	3.12	□□□□□ -1.91
LYS9	YNR050C	MGE1	P38523	228 aa		3.12	□□□□□ -1.91
LYS9	YNR050C	GLO1	P50107	326 aa		3.12	□□□□□ -1.91
LYS9	YNR050C	YKE2	P52553	114 aa		3.12	□□□□□ -1.91
LYS9	YNR050C	DLT1	Q04216	342 aa		3.12	□□□□□ -1.91
LYS9	YNR050C	SVF1	Q05515	481 aa		3.12	□□□□□ -1.91
LYS9	YNR050C	YLR225C	Q05948	407 aa	Known RBP	3.12	□□□□□ -1.91
LYS9	YNR050C	ESF1	Q06344	628 aa	Known RBP	3.12	□□□□□ -1.91
LYS9	YNR050C	HIR3	P47171	1648 aa		3.11	□□□□□ -1.91
LYS9	YNR050C	MET3	P08536	511 aa		3.11	□□□□□ -1.91
LYS9	YNR050C	HCA4	P20448	770 aa	Known RBP	3.11	□□□□□ -1.91
LYS9	YNR050C	ADY2	P25613	283 aa		3.11	□□□□□ -1.91
LYS9	YNR050C	YBR238C	P38330	731 aa	Known RBP	3.11	□□□□□ -1.91
LYS9	YNR050C	SDP1	P40479	209 aa		3.11	□□□□□ -1.91
LYS9	YNR050C	MRPS35	P53292	345 aa		3.11	□□□□□ -1.91
LYS9	YNR050C	RMD1	Q03441	430 aa		3.11	□□□□□ -1.91
LYS9	YNR050C	TRM11	Q12463	433 aa		3.11	□□□□□ -1.91
LYS9	YNR050C	CAF20	P12962	161 aa	Known RBP	3.1	□□□□□ -1.91
LYS9	YNR050C	ATE1	P16639	503 aa		3.1	□□□□□ -1.91
LYS9	YNR050C	YBR053C	P38235	358 aa		3.1	□□□□□ -1.91
LYS9	YNR050C	TSL1	P38427	1098 aa	Known RBP	3.1	□□□□□ -1.91
LYS9	YNR050C	POL32	P47110	350 aa		3.1	□□□□□ -1.91
LYS9	YNR050C	MUP1	P50276	574 aa		3.1	□□□□□ -1.91
LYS9	YNR050C	SEC5	P89102	971 aa		3.1	□□□□□ -1.91
LYS9	YNR050C	ESC2	Q06340	456 aa		3.1	□□□□□ -1.91
LYS9	YNR050C	GEA2	P39993	1459 aa	Known RBP	3.09	□□□□□ -1.91
LYS9	YNR050C	DNF1	P32660	1571 aa		3.09	□□□□□ -1.91
LYS9	YNR050C	CDC34	P14682	295 aa		3.09	□□□□□ -1.91
LYS9	YNR050C	PCL5	P38794	229 aa		3.09	□□□□□ -1.91
LYS9	YNR050C	YIL166C	P40445	542 aa		3.09	□□□□□ -1.91
LYS9	YNR050C	MYO2	P19524	1574 aa	Known RBP	3.08	□□□□□ -1.92
LYS9	YNR050C	NOT3	P06102	836 aa	Known RBP	3.08	□□□□□ -1.92
LYS9	YNR050C	PRP4	P20053	465 aa	Known RBP	3.08	□□□□□ -1.92
LYS9	YNR050C	STE13	P33894	931 aa		3.08	□□□□□ -1.92
LYS9	YNR050C	YKR078W	P36158	585 aa	Known RBP	3.08	□□□□□ -1.92
LYS9	YNR050C	CTF8	P38877	133 aa		3.08	□□□□□ -1.92
LYS9	YNR050C	MET10	P39692	1035 aa		3.08	□□□□□ -1.92
LYS9	YNR050C	FKH2	P41813	862 aa		3.08	□□□□□ -1.92
LYS9	YNR050C	YGR053C	P53234	283 aa		3.08	□□□□□ -1.92
LYS9	YNR050C	NOP7	P53261	605 aa	Known RBP	3.08	□□□□□ -1.92
LYS9	YNR050C	SRP1	Q02821	542 aa	Known RBP	3.08	□□□□□ -1.92
LYS9	YNR050C	SKI3	P17883	1432 aa	Known RBP	3.07	□□□□□ -1.92
LYS9	YNR050C	CDC43	P18898	376 aa		3.07	□□□□□ -1.92
LYS9	YNR050C	KIN3	P22209	435 aa		3.07	□□□□□ -1.92
LYS9	YNR050C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	3.07	□□□□□ -1.92	not detected
LYS9	YNR050C	YJL163C	P46996	555 aa		3.07	□□□□□ -1.92
LYS9	YNR050C	YPR196W	Q06595	470 aa		3.07	□□□□□ -1.92
LYS9	YNR050C	CDC25	P04821	1589 aa		3.06	□□□□□ -1.92
LYS9	YNR050C	DRS2	P39524	1355 aa		3.06	□□□□□ -1.92
LYS9	YNR050C	NPP1	P25353	742 aa		3.06	□□□□□ -1.92
LYS9	YNR050C	RPD3	P32561	433 aa		3.06	□□□□□ -1.92
LYS9	YNR050C	YUR1	P26725	428 aa		3.05	□□□□□ -1.92
LYS9	YNR050C	AFR1	P33304	620 aa		3.05	□□□□□ -1.92
LYS9	YNR050C	RPP1	P38786	293 aa		3.05	□□□□□ -1.92
LYS9	YNR050C	MBP1	P39678	833 aa		3.05	□□□□□ -1.92
LYS9	YNR050C	SPO20	Q04359	397 aa		3.05	□□□□□ -1.92
LYS9	YNR050C	SWM1	Q12379	170 aa		3.05	□□□□□ -1.92
LYS9	YNR050C	XRN1	P22147	1528 aa	Known RBP	3.05	□□□□□ -1.92
LYS9	YNR050C	BNI1	P41832	1953 aa		3.04	□□□□□ -1.92
LYS9	YNR050C	CDC48	P25694	835 aa	Known RBP	3.04	□□□□□ -1.92
LYS9	YNR050C	PAM1	P37304	830 aa	Known RBP	3.04	□□□□□ -1.92
LYS9	YNR050C	SCS3	P53012	380 aa		3.04	□□□□□ -1.92
LYS9	YNR050C	RIA1	P53893	1110 aa		3.04	□□□□□ -1.92
LYS9	YNR050C	DUS3	Q06053	668 aa	Known RBP	3.04	□□□□□ -1.92
LYS9	YNR050C	RPA190	P10964	1664 aa	Known RBP	3.03	□□□□□ -1.92
LYS9	YNR050C	CLN2	P20438	545 aa		3.03	□□□□□ -1.92
LYS9	YNR050C	EMP70	P32802	667 aa		3.03	□□□□□ -1.92
LYS9	YNR050C	MNR2	P35724	969 aa		3.03	□□□□□ -1.92
LYS9	YNR050C	GGA2	P38817	585 aa	Known RBP	3.03	□□□□□ -1.92
LYS9	YNR050C	YIL108W	P40483	696 aa	Known RBP	3.03	□□□□□ -1.92
LYS9	YNR050C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	3.03	□□□□□ -1.92	not detected
LYS9	YNR050C	PUS2	P53167	370 aa		3.03	□□□□□ -1.92
LYS9	YNR050C	MRI1	Q06489	411 aa	Known RBP	3.03	□□□□□ -1.92
LYS9	YNR050C	IRC13	Q08630	104 aa		3.03	□□□□□ -1.92
LYS9	YNR050C	ABD1	P32783	436 aa	Predicted RBP	3.02	□□□□□ -1.93
LYS9	YNR050C	SNF7	P39929	240 aa	Known RBP	3.02	□□□□□ -1.93
LYS9	YNR050C	APM1	Q00776	475 aa	Predicted RBP	3.02	□□□□□ -1.93
LYS9	YNR050C	CRR1	Q05790	422 aa		3.02	□□□□□ -1.93
LYS9	YNR050C	TAF3	Q12297	353 aa		3.02	□□□□□ -1.93
LYS9	YNR050C	CCT7	P42943	550 aa	Known RBP	3.01	□□□□□ -1.93
LYS9	YNR050C	GAT1	P43574	510 aa		3.01	□□□□□ -1.93
LYS9	YNR050C	AMA1	P50082	593 aa		3.01	□□□□□ -1.93
LYS9	YNR050C	HDA1	P53973	706 aa		3.01	□□□□□ -1.93
LYS9	YNR050C	OYE2	Q03558	400 aa	Known RBP	3.01	□□□□□ -1.93
LYS9	YNR050C	RPO31	P04051	1460 aa		3.01	□□□□□ -1.93
LYS9	YNR050C	ATG2	P53855	1592 aa		3.01	□□□□□ -1.93
LYS9	YNR050C	ASI2	P53895	289 aa		3	□□□□□ -1.93
LYS9	YNR050C	SGO1	Q08490	590 aa		3	□□□□□ -1.93
LYS9	YNR050C	ESC1	Q03661	1658 aa	Known RBP	3	□□□□□ -1.93
LYS9	YNR050C	UFD4	P33202	1483 aa		2.99	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms