RNA–Protein interactions for RNA: YNL242W

ATG2, Transcript of Peripheral membrane protein required for autophagic vesicle formation, yeast

Gene ATG2, Length 4,779 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG2	YNL242W	MSH6	Q03834	1242 aa		4.23	□□□□□ -1.73
ATG2	YNL242W	FRA1	Q07825	749 aa		4.23	□□□□□ -1.73
ATG2	YNL242W	OXR1	Q08952	273 aa		4.23	□□□□□ -1.73
ATG2	YNL242W	FAR1	P21268	830 aa		4.23	□□□□□ -1.73
ATG2	YNL242W	CBP3	P21560	335 aa		4.23	□□□□□ -1.73
ATG2	YNL242W	FRD1	P32614	470 aa	Known RBP	4.23	□□□□□ -1.73
ATG2	YNL242W	LIN1	P38852	340 aa	Predicted RBP	4.23	□□□□□ -1.73
ATG2	YNL242W	SSP1	P38871	571 aa		4.23	□□□□□ -1.73
ATG2	YNL242W	SHC1	P39000	512 aa		4.23	□□□□□ -1.73
ATG2	YNL242W	TDA10	P42938	290 aa		4.23	□□□□□ -1.73
ATG2	YNL242W	RTC4	P53850	401 aa		4.23	□□□□□ -1.73
ATG2	YNL242W	RPT6	Q01939	405 aa	Known RBP	4.23	□□□□□ -1.73
ATG2	YNL242W	YDR341C	Q05506	607 aa	Known RBP	4.23	□□□□□ -1.73
ATG2	YNL242W	RPL22A	P05749	121 aa	Known RBP	4.23	□□□□□ -1.73
ATG2	YNL242W	RPB2	P08518	1224 aa	Known RBP	4.23	□□□□□ -1.73
ATG2	YNL242W	GYP6	P32806	458 aa		4.23	□□□□□ -1.73
ATG2	YNL242W	BSD2	P38356	321 aa		4.23	□□□□□ -1.73
ATG2	YNL242W	SSZ1	P38788	538 aa	Known RBP	4.23	□□□□□ -1.73
ATG2	YNL242W	CRG1	P38892	291 aa	RIP-Chip data	4.23	□□□□□ -1.73	not detected
ATG2	YNL242W	VAB2	P40003	282 aa		4.23	□□□□□ -1.73
ATG2	YNL242W	SAP185	P40856	1058 aa		4.23	□□□□□ -1.73
ATG2	YNL242W	IRC8	P47046	822 aa		4.23	□□□□□ -1.73
ATG2	YNL242W	PTK2	P47116	818 aa	Known RBP	4.23	□□□□□ -1.73
ATG2	YNL242W	ALT2	P52892	507 aa		4.23	□□□□□ -1.73
ATG2	YNL242W	PUS6	P53294	404 aa		4.23	□□□□□ -1.73
ATG2	YNL242W	FIN1	Q03898	291 aa		4.23	□□□□□ -1.73
ATG2	YNL242W	GTB1	Q04924	702 aa		4.23	□□□□□ -1.73
ATG2	YNL242W	ACM1	Q08981	209 aa		4.23	□□□□□ -1.73
ATG2	YNL242W	AIM41	Q12032	185 aa		4.23	□□□□□ -1.73
ATG2	YNL242W	TAH18	Q12181	623 aa		4.23	□□□□□ -1.73
ATG2	YNL242W	TAL1	P15019	335 aa	Known RBP	4.23	□□□□□ -1.73
ATG2	YNL242W	SPO16	P17122	198 aa		4.23	□□□□□ -1.73
ATG2	YNL242W	SCJ1	P25303	377 aa		4.23	□□□□□ -1.73
ATG2	YNL242W	GPI10	P30777	616 aa		4.23	□□□□□ -1.73
ATG2	YNL242W	SWC5	P38326	303 aa		4.23	□□□□□ -1.73
ATG2	YNL242W	AIP1	P46680	615 aa	Known RBP	4.23	□□□□□ -1.73
ATG2	YNL242W	UTP6	Q02354	440 aa	Known RBP	4.23	□□□□□ -1.73
ATG2	YNL242W	VPS16	Q03308	798 aa		4.23	□□□□□ -1.73
ATG2	YNL242W	NCA2	Q12374	616 aa		4.23	□□□□□ -1.73
ATG2	YNL242W	PTC5	Q12511	572 aa		4.23	□□□□□ -1.73
ATG2	YNL242W	SEC2	P17065	759 aa		4.22	□□□□□ -1.73
ATG2	YNL242W	MLS1	P30952	554 aa		4.22	□□□□□ -1.73
ATG2	YNL242W	RRN3	P36070	627 aa		4.22	□□□□□ -1.73
ATG2	YNL242W	TIF5	P38431	405 aa	Known RBP	4.22	□□□□□ -1.73
ATG2	YNL242W	VMA22	P38784	181 aa		4.22	□□□□□ -1.73
ATG2	YNL242W	NMD3	P38861	518 aa	Known RBP	4.22	□□□□□ -1.73
ATG2	YNL242W	LYS14	P40971	790 aa		4.22	□□□□□ -1.73
ATG2	YNL242W	MMM1	P41800	426 aa		4.22	□□□□□ -1.73
ATG2	YNL242W	TY4A-J	P47023	414 aa		4.22	□□□□□ -1.73
ATG2	YNL242W	KAP114	P53067	1004 aa		4.22	□□□□□ -1.73
ATG2	YNL242W	ADE12	P80210	433 aa	Known RBP	4.22	□□□□□ -1.73
ATG2	YNL242W	DIG1	Q03063	452 aa	Known RBP	4.22	□□□□□ -1.73
ATG2	YNL242W	MMT1	Q03218	510 aa		4.22	□□□□□ -1.73
ATG2	YNL242W	SYF1	Q04048	859 aa	Predicted RBP	4.22	□□□□□ -1.73
ATG2	YNL242W	POB3	Q04636	552 aa	Known RBP	4.22	□□□□□ -1.73
ATG2	YNL242W	TFC6	Q06339	672 aa		4.22	□□□□□ -1.73
ATG2	YNL242W	MST1	P07236	462 aa		4.22	□□□□□ -1.73
ATG2	YNL242W	MSS116	P15424	664 aa	Known RBP	4.22	□□□□□ -1.73
ATG2	YNL242W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
ATG2	YNL242W	VPS34	P22543	875 aa		4.22	□□□□□ -1.73
ATG2	YNL242W	NAM7	P30771	971 aa	Known RBP	4.22	□□□□□ -1.73
ATG2	YNL242W	RPN2	P32565	945 aa	Known RBP	4.22	□□□□□ -1.73
ATG2	YNL242W	FES1	P38260	290 aa		4.22	□□□□□ -1.73
ATG2	YNL242W	LAM4	P38800	1345 aa		4.22	□□□□□ -1.73
ATG2	YNL242W	APE4	P38821	490 aa		4.22	□□□□□ -1.73
ATG2	YNL242W	SMX2	P40204	77 aa	Known RBP	4.22	□□□□□ -1.73
ATG2	YNL242W	NOP9	P47077	666 aa	Known RBP	4.22	□□□□□ -1.73
ATG2	YNL242W	SHE9	Q04172	456 aa		4.22	□□□□□ -1.73
ATG2	YNL242W	VIP1	Q06685	1146 aa	Known RBP	4.22	□□□□□ -1.73
ATG2	YNL242W	YLL058W	Q12198	575 aa		4.22	□□□□□ -1.73
ATG2	YNL242W	CHO2	P05374	869 aa	Known RBP	4.22	□□□□□ -1.73
ATG2	YNL242W	ADH4	P10127	382 aa		4.22	□□□□□ -1.73
ATG2	YNL242W	SNT1	P25357	1226 aa		4.22	□□□□□ -1.73
ATG2	YNL242W	ATG19	P35193	415 aa		4.22	□□□□□ -1.73
ATG2	YNL242W	SET5	P38890	526 aa	Known RBP	4.22	□□□□□ -1.73
ATG2	YNL242W	YTA12	P40341	825 aa		4.22	□□□□□ -1.73
ATG2	YNL242W	PCI8	P40512	444 aa		4.22	□□□□□ -1.73
ATG2	YNL242W	UBA2	P52488	636 aa		4.22	□□□□□ -1.73
ATG2	YNL242W	UBP16	Q02863	499 aa		4.22	□□□□□ -1.73
ATG2	YNL242W	GDE1	Q02979	1223 aa		4.22	□□□□□ -1.73
ATG2	YNL242W	MUB1	Q03162	620 aa		4.22	□□□□□ -1.73
ATG2	YNL242W	PRP42	Q03776	544 aa	Known RBP	4.22	□□□□□ -1.73
ATG2	YNL242W	DON1	Q05610	365 aa		4.22	□□□□□ -1.73
ATG2	YNL242W	ECI1	Q05871	280 aa		4.22	□□□□□ -1.73
ATG2	YNL242W	NEW1	Q08972	1196 aa	Known RBP	4.22	□□□□□ -1.73
ATG2	YNL242W	YLR125W	Q12138	136 aa		4.22	□□□□□ -1.73
ATG2	YNL242W	YOR111W	Q99210	232 aa		4.22	□□□□□ -1.73
ATG2	YNL242W	PRP9	P19736	530 aa	Known RBP	4.22	□□□□□ -1.73
ATG2	YNL242W	YCR051W	P25631	222 aa		4.22	□□□□□ -1.73
ATG2	YNL242W	YBL055C	P34220	418 aa	Predicted RBP	4.22	□□□□□ -1.73
ATG2	YNL242W	GPT2	P36148	743 aa		4.22	□□□□□ -1.73
ATG2	YNL242W	MAL31	P38156	614 aa		4.22	□□□□□ -1.73
ATG2	YNL242W	YIR042C	P40586	236 aa		4.22	□□□□□ -1.73
ATG2	YNL242W	IOC3	P43596	787 aa		4.22	□□□□□ -1.73
ATG2	YNL242W	TOS3	P43637	560 aa		4.22	□□□□□ -1.73
ATG2	YNL242W	NMD5	P46970	1048 aa		4.22	□□□□□ -1.73
ATG2	YNL242W	MON1	P53129	644 aa		4.22	□□□□□ -1.73
ATG2	YNL242W	UTP22	P53254	1237 aa	Predicted RBP	4.22	□□□□□ -1.73
ATG2	YNL242W	MDR1	P53258	950 aa		4.22	□□□□□ -1.73
ATG2	YNL242W	ARP9	Q05123	467 aa		4.22	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms