RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A OSH2Q12451 1283 aa4.93□□□□□ -1.62
YSF3YNL138W-A FKS3Q04952 1785 aa4.92□□□□□ -1.62
YSF3YNL138W-A CYC1P00044 109 aaPredicted RBP4.92□□□□□ -1.62
YSF3YNL138W-A CMP2P14747 604 aa4.92□□□□□ -1.62
YSF3YNL138W-A STI1P15705 589 aaKnown RBP RIP-Chip data4.92□□□□□ -1.62not detected
YSF3YNL138W-A YBR284WP38150 797 aa4.92□□□□□ -1.62
YSF3YNL138W-A GIC1P38785 314 aa4.92□□□□□ -1.62
YSF3YNL138W-A NPP2P39997 493 aa4.92□□□□□ -1.62
YSF3YNL138W-A LYS4P49367 693 aaPredicted RBP4.92□□□□□ -1.62
YSF3YNL138W-A GLT1Q12680 2145 aaKnown RBP4.92□□□□□ -1.62
YSF3YNL138W-A CIT1P00890 479 aa4.91□□□□□ -1.62
YSF3YNL138W-A KIN2P13186 1147 aaKnown RBP4.91□□□□□ -1.62
YSF3YNL138W-A HSP60P19882 572 aaKnown RBP4.91□□□□□ -1.62
YSF3YNL138W-A SRM1P21827 482 aa4.91□□□□□ -1.62
YSF3YNL138W-A YKL091CP33324 310 aaKnown RBP4.91□□□□□ -1.62
YSF3YNL138W-A CCC2P38995 1004 aa4.91□□□□□ -1.62
YSF3YNL138W-A RSP5P39940 809 aaKnown RBP4.91□□□□□ -1.62
YSF3YNL138W-A ECL1P48235 211 aa4.91□□□□□ -1.62
YSF3YNL138W-A SRT1Q03175 343 aa4.91□□□□□ -1.62
YSF3YNL138W-A VTS1Q08831 523 aaKnown RBP RIP-Chip data4.91□□□□□ -1.62not detected
YSF3YNL138W-A YLL058WQ12198 575 aa4.91□□□□□ -1.62
YSF3YNL138W-A TY3B-IQ7LHG5 1498 aaKnown RBP4.91□□□□□ -1.62
YSF3YNL138W-A GAL10P04397 699 aa4.9□□□□□ -1.63
YSF3YNL138W-A NPP1P25353 742 aa4.9□□□□□ -1.63
YSF3YNL138W-A AFR1P33304 620 aa4.9□□□□□ -1.63
YSF3YNL138W-A YRO2P38079 344 aa4.9□□□□□ -1.63
YSF3YNL138W-A ERT1P38140 529 aa4.9□□□□□ -1.63
YSF3YNL138W-A AVT1P47082 602 aa4.9□□□□□ -1.63
YSF3YNL138W-A MRPL22P53881 309 aa4.9□□□□□ -1.63
YSF3YNL138W-A SFB2P53953 876 aa4.9□□□□□ -1.63
YSF3YNL138W-A OSW2Q12202 724 aa4.9□□□□□ -1.63
YSF3YNL138W-A YPR071WQ12346 211 aa4.9□□□□□ -1.63
YSF3YNL138W-A SRB8P25648 1427 aa4.89□□□□□ -1.63
YSF3YNL138W-A ADE8P04161 214 aa4.89□□□□□ -1.63
YSF3YNL138W-A NPR2P39923 615 aa4.89□□□□□ -1.63
YSF3YNL138W-A ENV11P53246 860 aa4.89□□□□□ -1.63
YSF3YNL138W-A TPO2P53283 614 aa4.89□□□□□ -1.63
YSF3YNL138W-A PLB2Q03674 706 aa4.89□□□□□ -1.63
YSF3YNL138W-A ROT1Q03691 256 aa4.89□□□□□ -1.63
YSF3YNL138W-A HBN1Q96VH4 193 aa4.89□□□□□ -1.63
YSF3YNL138W-A NUP192P47054 1683 aa4.89□□□□□ -1.63
YSF3YNL138W-A TOP3P13099 656 aa4.88□□□□□ -1.63
YSF3YNL138W-A GAS1P22146 559 aaKnown RBP4.88□□□□□ -1.63
YSF3YNL138W-A YAP1801P38856 637 aa4.88□□□□□ -1.63
YSF3YNL138W-A SIT1P39980 628 aa4.88□□□□□ -1.63
YSF3YNL138W-A SNO2P53823 222 aa4.88□□□□□ -1.63
YSF3YNL138W-A MSC2Q03455 724 aa4.88□□□□□ -1.63
YSF3YNL138W-A TAF8Q03750 510 aa4.88□□□□□ -1.63
YSF3YNL138W-A YOR131CQ12486 218 aa4.88□□□□□ -1.63
YSF3YNL138W-A CAN1P04817 590 aa4.87□□□□□ -1.63
YSF3YNL138W-A RNQ1P25367 405 aa4.87□□□□□ -1.63
YSF3YNL138W-A FUN30P31380 1131 aa4.87□□□□□ -1.63
YSF3YNL138W-A TSA1P34760 196 aaKnown RBP4.87□□□□□ -1.63
YSF3YNL138W-A PBP2P38151 413 aaKnown RBP RIP-Chip data4.87□□□□□ -1.63not detected
YSF3YNL138W-A TSL1P38427 1098 aaKnown RBP4.87□□□□□ -1.63
YSF3YNL138W-A GYP7P48365 746 aa4.87□□□□□ -1.63
YSF3YNL138W-A RTA1P53047 317 aa4.87□□□□□ -1.63
YSF3YNL138W-A NPL3Q01560 414 aaKnown RBP RIP-Chip data4.87□□□□□ -1.63not detected
YSF3YNL138W-A RPN4Q03465 531 aa4.87□□□□□ -1.63
YSF3YNL138W-A SIZ1Q04195 904 aa4.87□□□□□ -1.63
YSF3YNL138W-A SGD1Q06132 899 aa4.87□□□□□ -1.63
YSF3YNL138W-A CDA2Q06703 312 aa4.87□□□□□ -1.63
YSF3YNL138W-A YOR352WQ08816 343 aa4.87□□□□□ -1.63
YSF3YNL138W-A TY4B-HP0C2J7 1802 aa4.86□□□□□ -1.63
YSF3YNL138W-A TY4B-JP47024 1803 aa4.86□□□□□ -1.63
YSF3YNL138W-A MSD1P15179 658 aaKnown RBP4.86□□□□□ -1.63
YSF3YNL138W-A CDC11P32458 415 aa4.86□□□□□ -1.63
YSF3YNL138W-A BET3P36149 193 aa4.86□□□□□ -1.63
YSF3YNL138W-A ECM21P38167 1117 aaKnown RBP4.86□□□□□ -1.63
YSF3YNL138W-A LAM1P38851 1228 aa4.86□□□□□ -1.63
YSF3YNL138W-A YER158CP40095 573 aa4.86□□□□□ -1.63
YSF3YNL138W-A TOK1P40310 691 aa4.86□□□□□ -1.63
YSF3YNL138W-A DOT5P40553 215 aa4.86□□□□□ -1.63
YSF3YNL138W-A HUL4P40985 892 aa4.86□□□□□ -1.63
YSF3YNL138W-A BUL2Q03758 920 aaKnown RBP4.86□□□□□ -1.63
YSF3YNL138W-A PPM2Q08282 695 aa4.86□□□□□ -1.63
YSF3YNL138W-A SNF2P22082 1703 aa4.86□□□□□ -1.63
YSF3YNL138W-A ENA1P13587 1091 aa4.85□□□□□ -1.63
YSF3YNL138W-A GAL11P19659 1081 aa4.85□□□□□ -1.63
YSF3YNL138W-A SRP101P32916 621 aa4.85□□□□□ -1.63
YSF3YNL138W-A PET10P36139 283 aa4.85□□□□□ -1.63
YSF3YNL138W-A AIM3P38266 947 aaKnown RBP4.85□□□□□ -1.63
YSF3YNL138W-A ZRG8P40021 1076 aa4.85□□□□□ -1.63
YSF3YNL138W-A BUD6P41697 788 aa4.85□□□□□ -1.63
YSF3YNL138W-A GTF1P53260 183 aaPredicted RBP4.85□□□□□ -1.63
YSF3YNL138W-A ENA2Q01896 1091 aa4.85□□□□□ -1.63
YSF3YNL138W-A LCD1Q04377 747 aa4.85□□□□□ -1.63
YSF3YNL138W-A YPR196WQ06595 470 aa4.85□□□□□ -1.63
YSF3YNL138W-A YDL124WQ07551 312 aaKnown RBP4.85□□□□□ -1.63
YSF3YNL138W-A ENA5Q12691 1091 aa4.85□□□□□ -1.63
YSF3YNL138W-A EDE1P34216 1381 aa4.85□□□□□ -1.63
YSF3YNL138W-A CIT2P08679 460 aa4.84□□□□□ -1.63
YSF3YNL138W-A ERR1P0CX10 437 aa4.84□□□□□ -1.63
YSF3YNL138W-A ERR2P0CX11 437 aa4.84□□□□□ -1.63
YSF3YNL138W-A CDC48P25694 835 aaKnown RBP4.84□□□□□ -1.63
YSF3YNL138W-A GGA2P38817 585 aaKnown RBP4.84□□□□□ -1.63
YSF3YNL138W-A MEF2P39677 819 aa4.84□□□□□ -1.63
YSF3YNL138W-A ORC1P54784 914 aaPredicted RBP4.84□□□□□ -1.63
YSF3YNL138W-A YPL277CQ08989 487 aa4.84□□□□□ -1.63
YSF3YNL138W-A TIM23P32897 222 aa4.83□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms