RNA–Protein interactions for RNA: YMR038C

CCS1, Transcript of Copper chaperone for superoxide dismutase Sod1p, yeastyeast

Gene CCS1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCS1YMR038C TRP3P00937 484 aa5.85□□□□□ -1.47
CCS1YMR038C MSB1P21339 1137 aaKnown RBP5.85□□□□□ -1.47
CCS1YMR038C PRD1P25375 712 aa5.85□□□□□ -1.47
CCS1YMR038C NIT1P40447 199 aa5.85□□□□□ -1.47
CCS1YMR038C MPH1P40562 993 aa5.85□□□□□ -1.47
CCS1YMR038C TYW3P53177 273 aa5.85□□□□□ -1.47
CCS1YMR038C PRP42Q03776 544 aaKnown RBP5.85□□□□□ -1.47
CCS1YMR038C YKR073CP36153 106 aa5.84□□□□□ -1.47
CCS1YMR038C RGD1P38339 666 aa5.84□□□□□ -1.47
CCS1YMR038C OYE3P41816 400 aaPredicted RBP5.84□□□□□ -1.47
CCS1YMR038C RPT4P53549 437 aaKnown RBP5.84□□□□□ -1.47
CCS1YMR038C ESC2Q06340 456 aa5.84□□□□□ -1.47
CCS1YMR038C HRK1Q08732 759 aaKnown RBP5.84□□□□□ -1.47
CCS1YMR038C FLO11P08640 1367 aa5.83□□□□□ -1.48
CCS1YMR038C MLS1P30952 554 aa5.83□□□□□ -1.48
CCS1YMR038C YKL069WP36088 180 aa5.83□□□□□ -1.48
CCS1YMR038C GPB2P39717 880 aa5.83□□□□□ -1.48
CCS1YMR038C MAM1P40065 302 aa5.83□□□□□ -1.48
CCS1YMR038C YOL057WQ08225 711 aa5.83□□□□□ -1.48
CCS1YMR038C YPL066WQ12194 479 aa5.83□□□□□ -1.48
CCS1YMR038C GIN4Q12263 1142 aa5.83□□□□□ -1.48
CCS1YMR038C SWI1P09547 1314 aa5.82□□□□□ -1.48
CCS1YMR038C YMR084WA2P2R3 262 aa5.82□□□□□ -1.48
CCS1YMR038C GCD1P09032 578 aaPredicted RBP5.82□□□□□ -1.48
CCS1YMR038C INO1P11986 533 aa5.82□□□□□ -1.48
CCS1YMR038C PRI2P20457 528 aa5.82□□□□□ -1.48
CCS1YMR038C PUF4P25339 888 aaKnown RBP RIP-Chip data5.82□□□□□ -1.48not detected
CCS1YMR038C SEA4P38164 1038 aa5.82□□□□□ -1.48
CCS1YMR038C SPL2P38839 148 aa5.82□□□□□ -1.48
CCS1YMR038C PEX7P39108 375 aa5.82□□□□□ -1.48
CCS1YMR038C THI22Q06490 572 aa5.82□□□□□ -1.48
CCS1YMR038C RTT109Q07794 436 aa5.82□□□□□ -1.48
CCS1YMR038C OPI10Q08202 246 aa5.82□□□□□ -1.48
CCS1YMR038C YOR059CQ08448 450 aaKnown RBP5.82□□□□□ -1.48
CCS1YMR038C YPL260WQ08977 551 aa5.82□□□□□ -1.48
CCS1YMR038C CYC7P00045 113 aa5.81□□□□□ -1.48
CCS1YMR038C YER152CP10356 443 aa5.81□□□□□ -1.48
CCS1YMR038C SAM35P14693 329 aa5.81□□□□□ -1.48
CCS1YMR038C BAS1P22035 811 aa5.81□□□□□ -1.48
CCS1YMR038C YSC84P32793 468 aa5.81□□□□□ -1.48
CCS1YMR038C MCM7P38132 845 aa5.81□□□□□ -1.48
CCS1YMR038C MPP10P47083 593 aaKnown RBP5.81□□□□□ -1.48
CCS1YMR038C HNT2P49775 206 aa5.81□□□□□ -1.48
CCS1YMR038C VPS62P53285 467 aa5.81□□□□□ -1.48
CCS1YMR038C FAL1Q12099 399 aaKnown RBP5.81□□□□□ -1.48
CCS1YMR038C SSF2Q12153 453 aaPredicted RBP5.81□□□□□ -1.48
CCS1YMR038C SPO21Q12411 609 aa5.81□□□□□ -1.48
CCS1YMR038C MGM1P32266 881 aa5.8□□□□□ -1.48
CCS1YMR038C ABD1P32783 436 aaPredicted RBP5.8□□□□□ -1.48
CCS1YMR038C GYP7P48365 746 aa5.8□□□□□ -1.48
CCS1YMR038C ALO1P54783 526 aaKnown RBP5.8□□□□□ -1.48
CCS1YMR038C IOC4Q04213 475 aa5.8□□□□□ -1.48
CCS1YMR038C SPO20Q04359 397 aa5.8□□□□□ -1.48
CCS1YMR038C RCL1Q08096 367 aaPredicted RBP5.8□□□□□ -1.48
CCS1YMR038C MED7Q08278 222 aa5.8□□□□□ -1.48
CCS1YMR038C RPS7AP26786 190 aaKnown RBP5.79□□□□□ -1.48
CCS1YMR038C NUP133P36161 1157 aa5.79□□□□□ -1.48
CCS1YMR038C YHL012WP38709 493 aa5.79□□□□□ -1.48
CCS1YMR038C MTC3P53077 123 aa5.79□□□□□ -1.48
CCS1YMR038C DNM1P54861 757 aa5.79□□□□□ -1.48
CCS1YMR038C THI3Q07471 609 aa5.79□□□□□ -1.48
CCS1YMR038C ACK1Q07622 623 aaPredicted RBP5.79□□□□□ -1.48
CCS1YMR038C TRE1Q08919 783 aa5.79□□□□□ -1.48
CCS1YMR038C RKM4Q12504 494 aa5.79□□□□□ -1.48
CCS1YMR038C PFK2P16862 959 aaKnown RBP RIP-Chip data5.78□□□□□ -1.48not detected
CCS1YMR038C AGP1P25376 633 aa5.78□□□□□ -1.48
CCS1YMR038C ERG7P38604 731 aa5.78□□□□□ -1.48
CCS1YMR038C RPN3P40016 523 aaKnown RBP5.78□□□□□ -1.48
CCS1YMR038C YFL054CP43549 646 aa5.78□□□□□ -1.48
CCS1YMR038C SDH1Q00711 640 aa5.78□□□□□ -1.48
CCS1YMR038C YDR306CQ06640 478 aa5.78□□□□□ -1.48
CCS1YMR038C GNT1Q12096 491 aa5.78□□□□□ -1.48
CCS1YMR038C SBP1P10080 294 aaKnown RBP5.77□□□□□ -1.49
CCS1YMR038C SNF5P18480 905 aa5.77□□□□□ -1.49
CCS1YMR038C BAP2P38084 609 aa5.77□□□□□ -1.49
CCS1YMR038C SPF1P39986 1215 aaKnown RBP5.77□□□□□ -1.49
CCS1YMR038C YGL176CP46945 554 aa5.77□□□□□ -1.49
CCS1YMR038C HOS3Q02959 697 aaKnown RBP5.77□□□□□ -1.49
CCS1YMR038C IRC4Q03036 179 aa5.77□□□□□ -1.49
CCS1YMR038C SRT1Q03175 343 aa5.77□□□□□ -1.49
CCS1YMR038C VPS13Q07878 3144 aa5.77□□□□□ -1.49
CCS1YMR038C DUR1,2P32528 1835 aaKnown RBP5.76□□□□□ -1.49
CCS1YMR038C MRP7P12687 371 aa5.76□□□□□ -1.49
CCS1YMR038C LCB1P25045 558 aaKnown RBP5.76□□□□□ -1.49
CCS1YMR038C SBA1P28707 216 aaKnown RBP5.76□□□□□ -1.49
CCS1YMR038C PRO1P32264 428 aa5.76□□□□□ -1.49
CCS1YMR038C YKL107WP34251 309 aa5.76□□□□□ -1.49
CCS1YMR038C TAT2P38967 592 aa5.76□□□□□ -1.49
CCS1YMR038C SIP5P40210 489 aaKnown RBP5.76□□□□□ -1.49
CCS1YMR038C YFL040WP43562 540 aa5.76□□□□□ -1.49
CCS1YMR038C YJR008WP47085 338 aa5.76□□□□□ -1.49
CCS1YMR038C INP52P50942 1183 aa5.76□□□□□ -1.49
CCS1YMR038C TNA1P53322 534 aa5.76□□□□□ -1.49
CCS1YMR038C HEF3P53978 1044 aaKnown RBP5.76□□□□□ -1.49
CCS1YMR038C DBP2P24783 546 aaKnown RBP5.75□□□□□ -1.49
CCS1YMR038C SRO9P25567 434 aaKnown RBP5.75□□□□□ -1.49
CCS1YMR038C MDL2P33311 773 aa5.75□□□□□ -1.49
CCS1YMR038C MCD4P36051 919 aa5.75□□□□□ -1.49
CCS1YMR038C VBA5P36172 582 aa5.75□□□□□ -1.49
CCS1YMR038C PTC7P38797 343 aa5.75□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 43.2 ms