RNA–Protein interactions for RNA: YLR400W

YLR400W, Transcript of Dubious open reading frame, yeastyeast

Gene YLR400W, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR400WYLR400W AFR1P33304 620 aa4.39□□□□□ -1.71
YLR400WYLR400W KTR4P38131 464 aa4.39□□□□□ -1.71
YLR400WYLR400W SUL1P38359 859 aa4.39□□□□□ -1.71
YLR400WYLR400W FPR3P38911 411 aaKnown RBP4.39□□□□□ -1.71
YLR400WYLR400W RAI1P53063 387 aaKnown RBP4.39□□□□□ -1.71
YLR400WYLR400W YDR306CQ06640 478 aa4.39□□□□□ -1.71
YLR400WYLR400W NOT3P06102 836 aaKnown RBP4.38□□□□□ -1.71
YLR400WYLR400W TRP4P07285 380 aaPredicted RBP4.38□□□□□ -1.71
YLR400WYLR400W RAD4P14736 754 aa4.38□□□□□ -1.71
YLR400WYLR400W YHR020WP38708 688 aaKnown RBP4.38□□□□□ -1.71
YLR400WYLR400W SSL1Q04673 461 aaPredicted RBP4.38□□□□□ -1.71
YLR400WYLR400W TDA5Q06417 326 aaKnown RBP4.38□□□□□ -1.71
YLR400WYLR400W FBP1P09201 348 aa4.37□□□□□ -1.71
YLR400WYLR400W AAR2P32357 355 aaPredicted RBP4.37□□□□□ -1.71
YLR400WYLR400W STE13P33894 931 aa4.37□□□□□ -1.71
YLR400WYLR400W ATG36P46983 293 aa4.37□□□□□ -1.71
YLR400WYLR400W ERG5P54781 538 aa4.37□□□□□ -1.71
YLR400WYLR400W NAN1Q02931 896 aaKnown RBP4.37□□□□□ -1.71
YLR400WYLR400W PPH3P32345 308 aa4.36□□□□□ -1.71
YLR400WYLR400W STE5P32917 917 aa4.36□□□□□ -1.71
YLR400WYLR400W PBY1P38254 753 aa4.36□□□□□ -1.71
YLR400WYLR400W NUP82P40368 713 aa4.36□□□□□ -1.71
YLR400WYLR400W UBA2P52488 636 aa4.36□□□□□ -1.71
YLR400WYLR400W YOR131CQ12486 218 aa4.36□□□□□ -1.71
YLR400WYLR400W MRP8P35719 219 aa4.35□□□□□ -1.71
YLR400WYLR400W YRO2P38079 344 aa4.35□□□□□ -1.71
YLR400WYLR400W SIT1P39980 628 aa4.35□□□□□ -1.71
YLR400WYLR400W NPL3Q01560 414 aaKnown RBP RIP-Chip data4.35□□□□□ -1.71not detected
YLR400WYLR400W TRM13Q12383 476 aa4.35□□□□□ -1.71
YLR400WYLR400W RPD3P32561 433 aa4.34□□□□□ -1.71
YLR400WYLR400W TIM23P32897 222 aa4.34□□□□□ -1.71
YLR400WYLR400W IRR1P40541 1150 aa4.34□□□□□ -1.71
YLR400WYLR400W TIM54P47045 478 aa4.34□□□□□ -1.71
YLR400WYLR400W STB4P50104 949 aa4.34□□□□□ -1.71
YLR400WYLR400W TMN2Q04562 672 aa4.34□□□□□ -1.71
YLR400WYLR400W SEC21P32074 935 aaKnown RBP4.33□□□□□ -1.72
YLR400WYLR400W ERT1P38140 529 aa4.33□□□□□ -1.72
YLR400WYLR400W MNN1P39106 762 aa4.33□□□□□ -1.72
YLR400WYLR400W RSP5P39940 809 aaKnown RBP4.33□□□□□ -1.72
YLR400WYLR400W SDP1P40479 209 aa4.33□□□□□ -1.72
YLR400WYLR400W BUL2Q03758 920 aaKnown RBP4.33□□□□□ -1.72
YLR400WYLR400W POB3Q04636 552 aaKnown RBP4.33□□□□□ -1.72
YLR400WYLR400W UBX5Q06682 500 aa4.33□□□□□ -1.72
YLR400WYLR400W FLC1Q08967 793 aa4.33□□□□□ -1.72
YLR400WYLR400W MET6P05694 767 aaKnown RBP4.32□□□□□ -1.72
YLR400WYLR400W ALG7P07286 448 aa4.32□□□□□ -1.72
YLR400WYLR400W HBS1P32769 611 aaKnown RBP4.32□□□□□ -1.72
YLR400WYLR400W YBR184WP38299 523 aa4.32□□□□□ -1.72
YLR400WYLR400W CHZ1P40019 153 aaPredicted RBP4.32□□□□□ -1.72
YLR400WYLR400W YJR142WP47173 342 aa4.32□□□□□ -1.72
YLR400WYLR400W HDA1P53973 706 aa4.32□□□□□ -1.72
YLR400WYLR400W RNT1Q02555 471 aa4.32□□□□□ -1.72
YLR400WYLR400W YML122CQ03207 126 aa4.32□□□□□ -1.72
YLR400WYLR400W PEX19Q07418 342 aa4.32□□□□□ -1.72
YLR400WYLR400W PHO8P11491 566 aa4.31□□□□□ -1.72
YLR400WYLR400W GRX4P32642 244 aa4.31□□□□□ -1.72
YLR400WYLR400W CTF13P35203 478 aa4.31□□□□□ -1.72
YLR400WYLR400W YIL108WP40483 696 aaKnown RBP4.31□□□□□ -1.72
YLR400WYLR400W PFD1P46988 109 aa4.31□□□□□ -1.72
YLR400WYLR400W CCM1P48237 864 aaPredicted RBP4.31□□□□□ -1.72
YLR400WYLR400W VPS30Q02948 557 aa4.31□□□□□ -1.72
YLR400WYLR400W YMR206WQ03695 313 aa4.31□□□□□ -1.72
YLR400WYLR400W FMP25Q08023 583 aa4.31□□□□□ -1.72
YLR400WYLR400W MCH5Q08777 521 aa4.31□□□□□ -1.72
YLR400WYLR400W ACF2Q12168 779 aa4.31□□□□□ -1.72
YLR400WYLR400W PPR1P07272 904 aaPredicted RBP4.3□□□□□ -1.72
YLR400WYLR400W TUB3P09734 445 aaKnown RBP4.3□□□□□ -1.72
YLR400WYLR400W ERR1P0CX10 437 aa4.3□□□□□ -1.72
YLR400WYLR400W ERR2P0CX11 437 aa4.3□□□□□ -1.72
YLR400WYLR400W RFA1P22336 621 aaKnown RBP4.3□□□□□ -1.72
YLR400WYLR400W TSR4P25040 408 aa4.3□□□□□ -1.72
YLR400WYLR400W RPL8BP29453 256 aaKnown RBP4.3□□□□□ -1.72
YLR400WYLR400W CTF8P38877 133 aa4.3□□□□□ -1.72
YLR400WYLR400W TOK1P40310 691 aa4.3□□□□□ -1.72
YLR400WYLR400W MUK1Q02866 612 aa4.3□□□□□ -1.72
YLR400WYLR400W LCD1Q04377 747 aa4.3□□□□□ -1.72
YLR400WYLR400W YLR125WQ12138 136 aa4.3□□□□□ -1.72
YLR400WYLR400W CAN1P04817 590 aa4.29□□□□□ -1.72
YLR400WYLR400W REC104P33323 182 aa4.29□□□□□ -1.72
YLR400WYLR400W TOM20P35180 183 aa4.29□□□□□ -1.72
YLR400WYLR400W UBP12P39538 1254 aa4.29□□□□□ -1.72
YLR400WYLR400W QRI1P43123 477 aaKnown RBP4.29□□□□□ -1.72
YLR400WYLR400W YKR011CQ02209 353 aa4.29□□□□□ -1.72
YLR400WYLR400W OMS1Q06668 471 aa4.29□□□□□ -1.72
YLR400WYLR400W YPR071WQ12346 211 aa4.29□□□□□ -1.72
YLR400WYLR400W CIT1P00890 479 aa4.28□□□□□ -1.72
YLR400WYLR400W TYE7P33122 291 aaPredicted RBP4.28□□□□□ -1.72
YLR400WYLR400W CEP3P40969 608 aa4.28□□□□□ -1.72
YLR400WYLR400W RTA1P53047 317 aa4.28□□□□□ -1.72
YLR400WYLR400W YGL081WP53156 320 aa4.28□□□□□ -1.72
YLR400WYLR400W YGR125WP53273 1036 aa4.28□□□□□ -1.72
YLR400WYLR400W TPO2P53283 614 aa4.28□□□□□ -1.72
YLR400WYLR400W SPO75Q07798 868 aa4.28□□□□□ -1.72
YLR400WYLR400W IRC10Q08118 586 aa4.28□□□□□ -1.72
YLR400WYLR400W TOP1P04786 769 aa4.27□□□□□ -1.73
YLR400WYLR400W SSB1P11484 613 aaKnown RBP4.27□□□□□ -1.73
YLR400WYLR400W YBR284WP38150 797 aa4.27□□□□□ -1.73
YLR400WYLR400W GGA2P38817 585 aaKnown RBP4.27□□□□□ -1.73
YLR400WYLR400W SSB2P40150 613 aaKnown RBP4.27□□□□□ -1.73
YLR400WYLR400W STU2P46675 888 aa4.27□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms