RNA–Protein interactions for RNA: YLR262C

YPT6, Transcript of Rab family GTPase, yeast

Gene YPT6, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT6	YLR262C	NSE3	Q05541	303 aa		5.17	□□□□□ -1.58
YPT6	YLR262C	LAS17	Q12446	633 aa		5.17	□□□□□ -1.58
YPT6	YLR262C	YOL098C	Q12496	1037 aa		5.17	□□□□□ -1.58
YPT6	YLR262C	MSD1	P15179	658 aa	Known RBP	5.16	□□□□□ -1.58
YPT6	YLR262C	TOK1	P40310	691 aa		5.16	□□□□□ -1.58
YPT6	YLR262C	GYP7	P48365	746 aa		5.16	□□□□□ -1.58
YPT6	YLR262C	HBN1	Q96VH4	193 aa		5.16	□□□□□ -1.58
YPT6	YLR262C	SED4	P25365	1065 aa		5.15	□□□□□ -1.59
YPT6	YLR262C	SRP40	P32583	406 aa	Predicted RBP	5.15	□□□□□ -1.59
YPT6	YLR262C	SUL1	P38359	859 aa		5.15	□□□□□ -1.59
YPT6	YLR262C	OCA5	P38738	679 aa		5.15	□□□□□ -1.59
YPT6	YLR262C	SIT1	P39980	628 aa		5.15	□□□□□ -1.59
YPT6	YLR262C	RAI1	P53063	387 aa	Known RBP	5.15	□□□□□ -1.59
YPT6	YLR262C	UPC2	Q12151	913 aa		5.15	□□□□□ -1.59
YPT6	YLR262C	CDC48	P25694	835 aa	Known RBP	5.14	□□□□□ -1.59
YPT6	YLR262C	CDC11	P32458	415 aa		5.14	□□□□□ -1.59
YPT6	YLR262C	YKL091C	P33324	310 aa	Known RBP	5.14	□□□□□ -1.59
YPT6	YLR262C	YKR078W	P36158	585 aa	Known RBP	5.14	□□□□□ -1.59
YPT6	YLR262C	RSP5	P39940	809 aa	Known RBP	5.14	□□□□□ -1.59
YPT6	YLR262C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	5.14	□□□□□ -1.59	not detected
YPT6	YLR262C	BUL2	Q03758	920 aa	Known RBP	5.14	□□□□□ -1.59
YPT6	YLR262C	LCD1	Q04377	747 aa		5.14	□□□□□ -1.59
YPT6	YLR262C	YDL124W	Q07551	312 aa	Known RBP	5.14	□□□□□ -1.59
YPT6	YLR262C	YLR040C	Q07988	224 aa		5.14	□□□□□ -1.59
YPT6	YLR262C	YOL073C	Q08232	322 aa		5.14	□□□□□ -1.59
YPT6	YLR262C	BET3	P36149	193 aa		5.13	□□□□□ -1.59
YPT6	YLR262C	KTR4	P38131	464 aa		5.13	□□□□□ -1.59
YPT6	YLR262C	HUL4	P40985	892 aa		5.13	□□□□□ -1.59
YPT6	YLR262C	RTA1	P53047	317 aa		5.13	□□□□□ -1.59
YPT6	YLR262C	TAF8	Q03750	510 aa		5.13	□□□□□ -1.59
YPT6	YLR262C	NOT3	P06102	836 aa	Known RBP	5.12	□□□□□ -1.59
YPT6	YLR262C	TOM70	P07213	617 aa	Known RBP	5.12	□□□□□ -1.59
YPT6	YLR262C	STI1	P15705	589 aa	Known RBP RIP-Chip data	5.12	□□□□□ -1.59	not detected
YPT6	YLR262C	PET10	P36139	283 aa		5.12	□□□□□ -1.59
YPT6	YLR262C	BUL1	P48524	976 aa		5.12	□□□□□ -1.59
YPT6	YLR262C	YOR131C	Q12486	218 aa		5.12	□□□□□ -1.59
YPT6	YLR262C	CAN1	P04817	590 aa		5.11	□□□□□ -1.59
YPT6	YLR262C	GAL11	P19659	1081 aa		5.11	□□□□□ -1.59
YPT6	YLR262C	ERG4	P25340	473 aa		5.11	□□□□□ -1.59
YPT6	YLR262C	REC104	P33323	182 aa		5.11	□□□□□ -1.59
YPT6	YLR262C	YML122C	Q03207	126 aa		5.11	□□□□□ -1.59
YPT6	YLR262C	TRP4	P07285	380 aa	Predicted RBP	5.1	□□□□□ -1.59
YPT6	YLR262C	ERR1	P0CX10	437 aa		5.1	□□□□□ -1.59
YPT6	YLR262C	ERR2	P0CX11	437 aa		5.1	□□□□□ -1.59
YPT6	YLR262C	RFA1	P22336	621 aa	Known RBP	5.1	□□□□□ -1.59
YPT6	YLR262C	RPD3	P32561	433 aa		5.1	□□□□□ -1.59
YPT6	YLR262C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	5.1	□□□□□ -1.59	not detected
YPT6	YLR262C	CCM1	P48237	864 aa	Predicted RBP	5.1	□□□□□ -1.59
YPT6	YLR262C	VPS30	Q02948	557 aa		5.1	□□□□□ -1.59
YPT6	YLR262C	MCH5	Q08777	521 aa		5.1	□□□□□ -1.59
YPT6	YLR262C	STE14	P32584	239 aa		5.09	□□□□□ -1.59
YPT6	YLR262C	TIM23	P32897	222 aa		5.09	□□□□□ -1.59
YPT6	YLR262C	CEP3	P40969	608 aa		5.09	□□□□□ -1.59
YPT6	YLR262C	YKE2	P52553	114 aa		5.09	□□□□□ -1.59
YPT6	YLR262C	RNT1	Q02555	471 aa		5.09	□□□□□ -1.59
YPT6	YLR262C	SSL1	Q04673	461 aa	Predicted RBP	5.09	□□□□□ -1.59
YPT6	YLR262C	OMS1	Q06668	471 aa		5.09	□□□□□ -1.59
YPT6	YLR262C	UBP6	P43593	499 aa	Known RBP	5.08	□□□□□ -1.6
YPT6	YLR262C	STU2	P46675	888 aa		5.08	□□□□□ -1.6
YPT6	YLR262C	TIM44	Q01852	431 aa		5.08	□□□□□ -1.6
YPT6	YLR262C	STE13	P33894	931 aa		5.07	□□□□□ -1.6
YPT6	YLR262C	YBR238C	P38330	731 aa	Known RBP	5.07	□□□□□ -1.6
YPT6	YLR262C	YMR206W	Q03695	313 aa		5.07	□□□□□ -1.6
YPT6	YLR262C	ENV7	Q12003	364 aa		5.07	□□□□□ -1.6
YPT6	YLR262C	ACF2	Q12168	779 aa		5.07	□□□□□ -1.6
YPT6	YLR262C	URA1	P28272	314 aa	Predicted RBP	5.06	□□□□□ -1.6
YPT6	YLR262C	GYP8	P43570	497 aa		5.06	□□□□□ -1.6
YPT6	YLR262C	STB4	P50104	949 aa		5.06	□□□□□ -1.6
YPT6	YLR262C	TMN2	Q04562	672 aa		5.06	□□□□□ -1.6
YPT6	YLR262C	PEX19	Q07418	342 aa		5.06	□□□□□ -1.6
YPT6	YLR262C	RPS9A	O13516	197 aa	Known RBP	5.05	□□□□□ -1.6
YPT6	YLR262C	GGA2	P38817	585 aa	Known RBP	5.05	□□□□□ -1.6
YPT6	YLR262C	YIL108W	P40483	696 aa	Known RBP	5.05	□□□□□ -1.6
YPT6	YLR262C	RPN4	Q03465	531 aa		5.05	□□□□□ -1.6
YPT6	YLR262C	YTA7	P40340	1379 aa		5.04	□□□□□ -1.6
YPT6	YLR262C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	5.04	□□□□□ -1.6	not detected
YPT6	YLR262C	ALG7	P07286	448 aa		5.04	□□□□□ -1.6
YPT6	YLR262C	MPH2	P0CD99	609 aa		5.04	□□□□□ -1.6
YPT6	YLR262C	ALG2	P43636	503 aa		5.04	□□□□□ -1.6
YPT6	YLR262C	SLU7	Q02775	382 aa	Known RBP	5.04	□□□□□ -1.6
YPT6	YLR262C	PPR1	P07272	904 aa	Predicted RBP	5.03	□□□□□ -1.6
YPT6	YLR262C	NUP82	P40368	713 aa		5.03	□□□□□ -1.6
YPT6	YLR262C	HDA1	P53973	706 aa		5.03	□□□□□ -1.6
YPT6	YLR262C	YKR011C	Q02209	353 aa		5.03	□□□□□ -1.6
YPT6	YLR262C	CIT2	P08679	460 aa		5.02	□□□□□ -1.61
YPT6	YLR262C	DAL7	P21826	554 aa		5.02	□□□□□ -1.61
YPT6	YLR262C	SEC21	P32074	935 aa	Known RBP	5.02	□□□□□ -1.61
YPT6	YLR262C	TYE7	P33122	291 aa	Predicted RBP	5.02	□□□□□ -1.61
YPT6	YLR262C	SDP1	P40479	209 aa		5.02	□□□□□ -1.61
YPT6	YLR262C	BUD6	P41697	788 aa		5.02	□□□□□ -1.61
YPT6	YLR262C	QRI1	P43123	477 aa	Known RBP	5.02	□□□□□ -1.61
YPT6	YLR262C	NIT3	P49954	291 aa		5.02	□□□□□ -1.61
YPT6	YLR262C	PUS2	P53167	370 aa		5.02	□□□□□ -1.61
YPT6	YLR262C	SWM1	Q12379	170 aa		5.02	□□□□□ -1.61
YPT6	YLR262C	FBP1	P09201	348 aa		5.01	□□□□□ -1.61
YPT6	YLR262C	YCL002C	P25565	263 aa		5.01	□□□□□ -1.61
YPT6	YLR262C	EMC3	P36039	253 aa		5.01	□□□□□ -1.61
YPT6	YLR262C	CHZ1	P40019	153 aa	Predicted RBP	5.01	□□□□□ -1.61
YPT6	YLR262C	HSV2	P50079	448 aa	Predicted RBP	5.01	□□□□□ -1.61
YPT6	YLR262C	TAD1	P53065	400 aa		5.01	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms