RNA–Protein interactions for RNA: YKR053C

YSR3, Transcript of Dihydrosphingosine 1-phosphate phosphatase, yeastyeast

Gene YSR3, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSR3YKR053C DDP1Q99321 188 aaKnown RBP11.1□□□□□ -0.63
YSR3YKR053C YEL1P34225 687 aa11.09□□□□□ -0.63
YSR3YKR053C CCT5P40413 562 aaKnown RBP11.09□□□□□ -0.63
YSR3YKR053C ORC5P50874 479 aa11.09□□□□□ -0.63
YSR3YKR053C SPO71Q03868 1245 aa11.09□□□□□ -0.63
YSR3YKR053C DNL4Q08387 944 aaPredicted RBP11.09□□□□□ -0.63
YSR3YKR053C TCO89Q08921 799 aa11.09□□□□□ -0.63
YSR3YKR053C MOT1P32333 1867 aa11.08□□□□□ -0.64
YSR3YKR053C DAL7P21826 554 aa11.08□□□□□ -0.64
YSR3YKR053C BIM1P40013 344 aa11.08□□□□□ -0.64
YSR3YKR053C YER186CP40101 306 aa11.08□□□□□ -0.64
YSR3YKR053C SCD6P45978 349 aaKnown RBP RIP-Chip data11.08□□□□□ -0.64not detected
YSR3YKR053C CCM1P48237 864 aaPredicted RBP11.08□□□□□ -0.64
YSR3YKR053C YPT11P48559 417 aa11.08□□□□□ -0.64
YSR3YKR053C ALG11P53954 548 aaKnown RBP11.08□□□□□ -0.64
YSR3YKR053C KEX1P09620 729 aa11.07□□□□□ -0.64
YSR3YKR053C MRF1P30775 413 aaPredicted RBP11.07□□□□□ -0.64
YSR3YKR053C VPS24P36095 224 aaKnown RBP11.07□□□□□ -0.64
YSR3YKR053C RFS1P38234 210 aaKnown RBP11.07□□□□□ -0.64
YSR3YKR053C MMF1P40185 145 aaKnown RBP11.07□□□□□ -0.64
YSR3YKR053C ASN1P49089 572 aaKnown RBP11.07□□□□□ -0.64
YSR3YKR053C SHS1Q07657 551 aa11.07□□□□□ -0.64
YSR3YKR053C PUS1Q12211 544 aaKnown RBP11.07□□□□□ -0.64
YSR3YKR053C MED1Q12321 566 aa11.07□□□□□ -0.64
YSR3YKR053C SCP160P06105 1222 aaKnown RBP RIP-Chip data11.06□□□□□ -0.64not detected
YSR3YKR053C VMA1P17255 1071 aaKnown RBP11.06□□□□□ -0.64
YSR3YKR053C SEC21P32074 935 aaKnown RBP11.06□□□□□ -0.64
YSR3YKR053C CCL1P37366 393 aa11.06□□□□□ -0.64
YSR3YKR053C NPP2P39997 493 aa11.06□□□□□ -0.64
YSR3YKR053C FAF1P40546 346 aaPredicted RBP11.06□□□□□ -0.64
YSR3YKR053C OYE3P41816 400 aaPredicted RBP11.06□□□□□ -0.64
YSR3YKR053C TLG2Q08144 397 aa11.06□□□□□ -0.64
YSR3YKR053C SDH5Q08230 162 aa11.06□□□□□ -0.64
YSR3YKR053C OSH2Q12451 1283 aa11.06□□□□□ -0.64
YSR3YKR053C TRK2P28584 889 aa11.05□□□□□ -0.64
YSR3YKR053C CYS3P31373 394 aaKnown RBP11.05□□□□□ -0.64
YSR3YKR053C SAC6P32599 642 aaKnown RBP11.05□□□□□ -0.64
YSR3YKR053C RAD54P32863 898 aa11.05□□□□□ -0.64
YSR3YKR053C TRM2P33753 639 aa11.05□□□□□ -0.64
YSR3YKR053C HEL1P36113 551 aa11.05□□□□□ -0.64
YSR3YKR053C XDJ1P39102 459 aa11.05□□□□□ -0.64
YSR3YKR053C SPP1Q03012 353 aa11.05□□□□□ -0.64
YSR3YKR053C ESC8Q08119 714 aa11.05□□□□□ -0.64
YSR3YKR053C ETT1Q08421 412 aaKnown RBP11.05□□□□□ -0.64
YSR3YKR053C PKH2Q12236 1081 aaKnown RBP11.05□□□□□ -0.64
YSR3YKR053C AIM44Q99299 758 aa11.05□□□□□ -0.64
YSR3YKR053C YER130CP39959 443 aa11.04□□□□□ -0.64
YSR3YKR053C YEL023CP39992 682 aa11.04□□□□□ -0.64
YSR3YKR053C ULI1P43604 169 aa11.04□□□□□ -0.64
YSR3YKR053C CWC21Q03375 135 aaKnown RBP11.04□□□□□ -0.64
YSR3YKR053C RCR2Q03446 210 aaKnown RBP11.04□□□□□ -0.64
YSR3YKR053C UTP14Q04500 899 aaKnown RBP11.04□□□□□ -0.64
YSR3YKR053C DON1Q05610 365 aa11.04□□□□□ -0.64
YSR3YKR053C GPA1P08539 472 aa11.03□□□□□ -0.64
YSR3YKR053C RPL4AP10664 362 aaKnown RBP11.03□□□□□ -0.64
YSR3YKR053C PRR1P28708 518 aa11.03□□□□□ -0.64
YSR3YKR053C MUD1P32605 298 aaKnown RBP11.03□□□□□ -0.64
YSR3YKR053C YKL091CP33324 310 aaKnown RBP11.03□□□□□ -0.64
YSR3YKR053C LCB2P40970 561 aa11.03□□□□□ -0.64
YSR3YKR053C CIR1P42940 261 aa11.03□□□□□ -0.64
YSR3YKR053C RPL4BP49626 362 aaKnown RBP11.03□□□□□ -0.64
YSR3YKR053C HSH155P49955 971 aaKnown RBP11.03□□□□□ -0.64
YSR3YKR053C MRN1Q08925 612 aaKnown RBP RIP-Chip data11.03□□□□□ -0.64not detected
YSR3YKR053C DAP1Q12091 152 aa11.03□□□□□ -0.64
YSR3YKR053C RIF1P29539 1916 aa11.03□□□□□ -0.64
YSR3YKR053C HAP2P06774 265 aa11.02□□□□□ -0.65
YSR3YKR053C MAK16P10962 306 aaPredicted RBP11.02□□□□□ -0.65
YSR3YKR053C SSB1P11484 613 aaKnown RBP11.02□□□□□ -0.65
YSR3YKR053C TAF13P11747 167 aa11.02□□□□□ -0.65
YSR3YKR053C SSB2P40150 613 aaKnown RBP11.02□□□□□ -0.65
YSR3YKR053C TOS3P43637 560 aa11.02□□□□□ -0.65
YSR3YKR053C HAP5Q02516 242 aa11.02□□□□□ -0.65
YSR3YKR053C EEB1Q02891 456 aa11.02□□□□□ -0.65
YSR3YKR053C MRI1Q06489 411 aaKnown RBP11.02□□□□□ -0.65
YSR3YKR053C SGT2Q12118 346 aaKnown RBP11.02□□□□□ -0.65
YSR3YKR053C OM45P16547 393 aa11.01□□□□□ -0.65
YSR3YKR053C APM2P38700 605 aa11.01□□□□□ -0.65
YSR3YKR053C BCD1P38772 366 aa11.01□□□□□ -0.65
YSR3YKR053C YHR054CP38780 354 aa11.01□□□□□ -0.65
YSR3YKR053C RLP24Q07915 199 aaKnown RBP11.01□□□□□ -0.65
YSR3YKR053C YPL216WQ08964 1102 aa11.01□□□□□ -0.65
YSR3YKR053C ASP3-2P0CX77 362 aa11□□□□□ -0.65
YSR3YKR053C ASP3-3P0CX78 362 aa11□□□□□ -0.65
YSR3YKR053C ASP3-4P0CX79 362 aa11□□□□□ -0.65
YSR3YKR053C ASP3-1P0CZ17 362 aa11□□□□□ -0.65
YSR3YKR053C NAT1P12945 854 aaKnown RBP11□□□□□ -0.65
YSR3YKR053C HMT1P38074 348 aa11□□□□□ -0.65
YSR3YKR053C CCC2P38995 1004 aa11□□□□□ -0.65
YSR3YKR053C TIM8P57744 87 aa11□□□□□ -0.65
YSR3YKR053C PIG1Q06216 648 aa11□□□□□ -0.65
YSR3YKR053C SPP382Q06411 708 aaPredicted RBP11□□□□□ -0.65
YSR3YKR053C MLH2Q07980 695 aa11□□□□□ -0.65
YSR3YKR053C MNL2Q12205 849 aa11□□□□□ -0.65
YSR3YKR053C VPH1P32563 840 aaKnown RBP10.99□□□□□ -0.65
YSR3YKR053C FTR1P40088 404 aa10.99□□□□□ -0.65
YSR3YKR053C LCD1Q04377 747 aa10.99□□□□□ -0.65
YSR3YKR053C YML083CQ04526 418 aa10.99□□□□□ -0.65
YSR3YKR053C APC11Q12157 165 aa10.99□□□□□ -0.65
YSR3YKR053C CTF3Q12748 733 aa10.99□□□□□ -0.65
YSR3YKR053C ATP1P07251 545 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 5,963 RNA–protein pairs in 29.7 ms