RNA–Protein interactions for RNA: YJL197W

UBP12, Transcript of Ubiquitin-specific protease, yeast

Gene UBP12, Length 3,765 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP12	YJL197W	YOL114C	Q12322	202 aa		4.28	□□□□□ -1.72
UBP12	YJL197W	SCM3	Q12334	223 aa		4.28	□□□□□ -1.72
UBP12	YJL197W	RPL11A	P0C0W9	174 aa	Known RBP	4.28	□□□□□ -1.72
UBP12	YJL197W	HOP1	P20050	605 aa		4.28	□□□□□ -1.72
UBP12	YJL197W	BEM3	P32873	1128 aa		4.28	□□□□□ -1.72
UBP12	YJL197W	RPN10	P38886	268 aa	Known RBP	4.28	□□□□□ -1.72
UBP12	YJL197W	HAS1	Q03532	505 aa	Known RBP	4.28	□□□□□ -1.72
UBP12	YJL197W	KCS1	Q12494	1050 aa		4.28	□□□□□ -1.72
UBP12	YJL197W	RPL11B	Q3E757	174 aa	Predicted RBP	4.28	□□□□□ -1.72
UBP12	YJL197W	CHL1	P22516	861 aa	Predicted RBP	4.27	□□□□□ -1.73
UBP12	YJL197W	YKU70	P32807	602 aa		4.27	□□□□□ -1.73
UBP12	YJL197W	XRS2	P33301	854 aa		4.27	□□□□□ -1.73
UBP12	YJL197W	NUP120	P35729	1037 aa		4.27	□□□□□ -1.73
UBP12	YJL197W	DOT6	P40059	670 aa	Known RBP	4.27	□□□□□ -1.73
UBP12	YJL197W	AIM14	P53109	570 aa		4.27	□□□□□ -1.73
UBP12	YJL197W	RCF1	Q03713	159 aa		4.27	□□□□□ -1.73
UBP12	YJL197W	CIA1	Q05583	330 aa		4.27	□□□□□ -1.73
UBP12	YJL197W	YLR352W	Q06479	807 aa		4.27	□□□□□ -1.73
UBP12	YJL197W	NGG1	P32494	702 aa		4.27	□□□□□ -1.73
UBP12	YJL197W	HSL7	P38274	827 aa		4.27	□□□□□ -1.73
UBP12	YJL197W	YAR028W	P39548	234 aa		4.27	□□□□□ -1.73
UBP12	YJL197W	HLR1	Q04429	423 aa		4.27	□□□□□ -1.73
UBP12	YJL197W	ACM1	Q08981	209 aa		4.27	□□□□□ -1.73
UBP12	YJL197W	MET32	Q12041	191 aa		4.27	□□□□□ -1.73
UBP12	YJL197W	HXT6	P39003	570 aa	Known RBP	4.26	□□□□□ -1.73
UBP12	YJL197W	HXT7	P39004	570 aa		4.26	□□□□□ -1.73
UBP12	YJL197W	RPN3	P40016	523 aa	Known RBP	4.26	□□□□□ -1.73
UBP12	YJL197W	YJL181W	P46987	611 aa		4.26	□□□□□ -1.73
UBP12	YJL197W	GYP7	P48365	746 aa		4.26	□□□□□ -1.73
UBP12	YJL197W	HOL1	P53389	586 aa		4.26	□□□□□ -1.73
UBP12	YJL197W	PER1	P25625	357 aa		4.26	□□□□□ -1.73
UBP12	YJL197W	SEG2	P34250	1132 aa		4.26	□□□□□ -1.73
UBP12	YJL197W	NOP16	P40007	231 aa	Known RBP	4.26	□□□□□ -1.73
UBP12	YJL197W	MPP10	P47083	593 aa	Known RBP	4.26	□□□□□ -1.73
UBP12	YJL197W	PUS4	P48567	403 aa	Known RBP	4.26	□□□□□ -1.73
UBP12	YJL197W	RNR4	P49723	345 aa	Known RBP	4.26	□□□□□ -1.73
UBP12	YJL197W	YLL054C	Q12244	843 aa		4.26	□□□□□ -1.73
UBP12	YJL197W	VPS5	Q92331	675 aa		4.26	□□□□□ -1.73
UBP12	YJL197W	NPP1	P25353	742 aa		4.26	□□□□□ -1.73
UBP12	YJL197W	OAF3	P36023	863 aa		4.26	□□□□□ -1.73
UBP12	YJL197W	BCD1	P38772	366 aa		4.26	□□□□□ -1.73
UBP12	YJL197W	APE4	P38821	490 aa		4.26	□□□□□ -1.73
UBP12	YJL197W	KAP123	P40069	1113 aa	Known RBP	4.26	□□□□□ -1.73
UBP12	YJL197W	SPN1	Q06505	410 aa	Predicted RBP	4.26	□□□□□ -1.73
UBP12	YJL197W	VHS3	Q08438	674 aa		4.26	□□□□□ -1.73
UBP12	YJL197W	CDC4	P07834	779 aa		4.25	□□□□□ -1.73
UBP12	YJL197W	NOP4	P37838	685 aa	Known RBP	4.25	□□□□□ -1.73
UBP12	YJL197W	MRPL16	P38064	232 aa		4.25	□□□□□ -1.73
UBP12	YJL197W	ERR3	P42222	437 aa		4.25	□□□□□ -1.73
UBP12	YJL197W	BNA1	P47096	177 aa		4.25	□□□□□ -1.73
UBP12	YJL197W	TEP1	P53916	434 aa		4.25	□□□□□ -1.73
UBP12	YJL197W	CEG1	Q01159	459 aa	Predicted RBP	4.25	□□□□□ -1.73
UBP12	YJL197W	GSF2	Q04697	403 aa	Known RBP	4.25	□□□□□ -1.73
UBP12	YJL197W	RSC58	Q07979	502 aa		4.25	□□□□□ -1.73
UBP12	YJL197W	GFA1	P14742	717 aa	Known RBP	4.25	□□□□□ -1.73
UBP12	YJL197W	MSH1	P25846	959 aa		4.25	□□□□□ -1.73
UBP12	YJL197W	URA1	P28272	314 aa	Predicted RBP	4.25	□□□□□ -1.73
UBP12	YJL197W	NEO1	P40527	1151 aa		4.25	□□□□□ -1.73
UBP12	YJL197W	CCT8	P47079	568 aa	Known RBP	4.25	□□□□□ -1.73
UBP12	YJL197W	HXT16	P47185	567 aa		4.25	□□□□□ -1.73
UBP12	YJL197W	SGD1	Q06132	899 aa		4.25	□□□□□ -1.73
UBP12	YJL197W	AFT1	P22149	690 aa		4.25	□□□□□ -1.73
UBP12	YJL197W	DBP2	P24783	546 aa	Known RBP	4.25	□□□□□ -1.73
UBP12	YJL197W	SLA2	P33338	968 aa		4.25	□□□□□ -1.73
UBP12	YJL197W	QNS1	P38795	714 aa	Known RBP	4.25	□□□□□ -1.73
UBP12	YJL197W	YKE2	P52553	114 aa		4.25	□□□□□ -1.73
UBP12	YJL197W	ZIP2	P53061	704 aa		4.25	□□□□□ -1.73
UBP12	YJL197W	PSK2	Q08217	1101 aa		4.25	□□□□□ -1.73
UBP12	YJL197W	ARP7	Q12406	477 aa		4.25	□□□□□ -1.73
UBP12	YJL197W	REI1	P38344	393 aa	Predicted RBP	4.24	□□□□□ -1.73
UBP12	YJL197W	ASK10	P48361	1146 aa		4.24	□□□□□ -1.73
UBP12	YJL197W	YHM2	Q04013	314 aa		4.24	□□□□□ -1.73
UBP12	YJL197W	HCA4	P20448	770 aa	Known RBP	4.24	□□□□□ -1.73
UBP12	YJL197W	MIH1	P23748	554 aa		4.24	□□□□□ -1.73
UBP12	YJL197W	PRO1	P32264	428 aa		4.24	□□□□□ -1.73
UBP12	YJL197W	ERT1	P38140	529 aa		4.24	□□□□□ -1.73
UBP12	YJL197W	TSL1	P38427	1098 aa	Known RBP	4.24	□□□□□ -1.73
UBP12	YJL197W	SAW1	P39735	261 aa		4.24	□□□□□ -1.73
UBP12	YJL197W	BNA2	P47125	453 aa		4.24	□□□□□ -1.73
UBP12	YJL197W	YJR098C	P47139	656 aa		4.24	□□□□□ -1.73
UBP12	YJL197W	TIM50	Q02776	476 aa		4.24	□□□□□ -1.73
UBP12	YJL197W	NFS1	P25374	497 aa		4.24	□□□□□ -1.73
UBP12	YJL197W	SHM2	P37291	469 aa	Known RBP	4.24	□□□□□ -1.73
UBP12	YJL197W	PPE1	P38796	400 aa		4.24	□□□□□ -1.73
UBP12	YJL197W	SBE2	P42223	864 aa	Known RBP	4.24	□□□□□ -1.73
UBP12	YJL197W	SPO74	P45819	413 aa		4.24	□□□□□ -1.73
UBP12	YJL197W	RSC1	P53236	928 aa		4.24	□□□□□ -1.73
UBP12	YJL197W	ENV11	P53246	860 aa		4.24	□□□□□ -1.73
UBP12	YJL197W	LSC2	P53312	427 aa		4.24	□□□□□ -1.73
UBP12	YJL197W	NOG2	P53742	486 aa	Known RBP	4.24	□□□□□ -1.73
UBP12	YJL197W	ECM38	Q05902	660 aa	Predicted RBP	4.24	□□□□□ -1.73
UBP12	YJL197W	BRE4	Q07660	1125 aa		4.24	□□□□□ -1.73
UBP12	YJL197W	RPS21A	P0C0V8	87 aa	Known RBP	4.23	□□□□□ -1.73
UBP12	YJL197W	CDC48	P25694	835 aa	Known RBP	4.23	□□□□□ -1.73
UBP12	YJL197W	PAH1	P32567	862 aa		4.23	□□□□□ -1.73
UBP12	YJL197W	NPL6	P32832	435 aa		4.23	□□□□□ -1.73
UBP12	YJL197W	PXA2	P34230	853 aa		4.23	□□□□□ -1.73
UBP12	YJL197W	SDS22	P36047	338 aa		4.23	□□□□□ -1.73
UBP12	YJL197W	NUP85	P46673	744 aa		4.23	□□□□□ -1.73
UBP12	YJL197W	ALY2	P47029	1046 aa		4.23	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 22 ms