RNA–Protein interactions for RNA: YJL154C

VPS35, Transcript of Endosomal subunit of membrane-associated retromer complex, yeastyeast

Gene VPS35, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS35YJL154C MEF1P25039 761 aa2.8□□□□□ -1.96
VPS35YJL154C AFR1P33304 620 aa2.8□□□□□ -1.96
VPS35YJL154C POL12P38121 705 aaPredicted RBP2.8□□□□□ -1.96
VPS35YJL154C POA1P38218 177 aa2.8□□□□□ -1.96
VPS35YJL154C YEN1P40028 759 aa2.8□□□□□ -1.96
VPS35YJL154C SNO2P53823 222 aa2.8□□□□□ -1.96
VPS35YJL154C XYL2Q07993 356 aa2.8□□□□□ -1.96
VPS35YJL154C CYS3P31373 394 aaKnown RBP2.8□□□□□ -1.96
VPS35YJL154C PUB1P32588 453 aaKnown RBP RIP-Chip data2.8□□□□□ -1.96not detected
VPS35YJL154C TYE7P33122 291 aaPredicted RBP2.8□□□□□ -1.96
VPS35YJL154C NPP2P39997 493 aa2.8□□□□□ -1.96
VPS35YJL154C TAD1P53065 400 aa2.8□□□□□ -1.96
VPS35YJL154C ATP25Q03153 612 aa2.8□□□□□ -1.96
VPS35YJL154C BRE4Q07660 1125 aa2.8□□□□□ -1.96
VPS35YJL154C SRD1P09007 221 aa2.79□□□□□ -1.96
VPS35YJL154C SET5P38890 526 aaKnown RBP2.79□□□□□ -1.96
VPS35YJL154C YIL108WP40483 696 aaKnown RBP2.79□□□□□ -1.96
VPS35YJL154C YFL052WP43551 465 aa2.79□□□□□ -1.96
VPS35YJL154C YGR237CP50089 785 aa2.79□□□□□ -1.96
VPS35YJL154C MAL11P53048 616 aa2.79□□□□□ -1.96
VPS35YJL154C GTF1P53260 183 aaPredicted RBP2.79□□□□□ -1.96
VPS35YJL154C BUL2Q03758 920 aaKnown RBP2.79□□□□□ -1.96
VPS35YJL154C CRR1Q05790 422 aa2.79□□□□□ -1.96
VPS35YJL154C FAP7Q12055 197 aaPredicted RBP2.79□□□□□ -1.96
VPS35YJL154C LPX1Q12405 387 aaKnown RBP2.79□□□□□ -1.96
VPS35YJL154C GAL10P04397 699 aa2.79□□□□□ -1.96
VPS35YJL154C SSB1P11484 613 aaKnown RBP2.79□□□□□ -1.96
VPS35YJL154C SSB2P40150 613 aaKnown RBP2.79□□□□□ -1.96
VPS35YJL154C MSC2Q03455 724 aa2.79□□□□□ -1.96
VPS35YJL154C STE13P33894 931 aa2.78□□□□□ -1.96
VPS35YJL154C BFA1P47113 574 aa2.78□□□□□ -1.96
VPS35YJL154C SNP1Q00916 300 aaPredicted RBP2.78□□□□□ -1.96
VPS35YJL154C YKR011CQ02209 353 aa2.78□□□□□ -1.96
VPS35YJL154C ROT1Q03691 256 aa2.78□□□□□ -1.96
VPS35YJL154C SIZ1Q04195 904 aa2.78□□□□□ -1.96
VPS35YJL154C COG8Q04632 607 aa2.78□□□□□ -1.96
VPS35YJL154C SGD1Q06132 899 aa2.78□□□□□ -1.96
VPS35YJL154C GUD1Q07729 489 aa2.78□□□□□ -1.96
VPS35YJL154C THI73Q07904 523 aa2.78□□□□□ -1.96
VPS35YJL154C REV3P14284 1504 aa2.78□□□□□ -1.96
VPS35YJL154C ATG19P35193 415 aa2.78□□□□□ -1.96
VPS35YJL154C RLP7P40693 322 aaKnown RBP2.78□□□□□ -1.96
VPS35YJL154C YNR029CP53729 429 aaKnown RBP2.78□□□□□ -1.96
VPS35YJL154C UME1Q03010 460 aa2.78□□□□□ -1.96
VPS35YJL154C YPL277CQ08989 487 aa2.78□□□□□ -1.96
VPS35YJL154C YOR022CQ12204 715 aa2.78□□□□□ -1.96
VPS35YJL154C YEL1P34225 687 aa2.78□□□□□ -1.97
VPS35YJL154C MTC2P34246 357 aa2.78□□□□□ -1.97
VPS35YJL154C MND2P40577 368 aa2.78□□□□□ -1.97
VPS35YJL154C CAF16P43569 289 aa2.78□□□□□ -1.97
VPS35YJL154C YKE2P52553 114 aa2.78□□□□□ -1.97
VPS35YJL154C NPY1P53164 384 aa2.78□□□□□ -1.97
VPS35YJL154C NHX1Q04121 633 aa2.78□□□□□ -1.97
VPS35YJL154C DFG16Q99234 619 aa2.78□□□□□ -1.97
VPS35YJL154C SPE1P08432 466 aa2.77□□□□□ -1.97
VPS35YJL154C SFL1P20134 766 aa2.77□□□□□ -1.97
VPS35YJL154C HOG1P32485 435 aa2.77□□□□□ -1.97
VPS35YJL154C UBP12P39538 1254 aa2.77□□□□□ -1.97
VPS35YJL154C HFD1Q04458 532 aa2.77□□□□□ -1.97
VPS35YJL154C CDA1Q06702 301 aa2.77□□□□□ -1.97
VPS35YJL154C PRP19P32523 503 aaKnown RBP2.77□□□□□ -1.97
VPS35YJL154C RPD3P32561 433 aa2.77□□□□□ -1.97
VPS35YJL154C GRX4P32642 244 aa2.77□□□□□ -1.97
VPS35YJL154C TYS1P36421 394 aaKnown RBP2.77□□□□□ -1.97
VPS35YJL154C ABZ1P37254 787 aaPredicted RBP2.77□□□□□ -1.97
VPS35YJL154C ORC3P54790 616 aa2.77□□□□□ -1.97
VPS35YJL154C LRS4Q04087 347 aaKnown RBP2.77□□□□□ -1.97
VPS35YJL154C IOC4Q04213 475 aa2.77□□□□□ -1.97
VPS35YJL154C GUP2Q08929 609 aa2.77□□□□□ -1.97
VPS35YJL154C SSD1P24276 1250 aaKnown RBP RIP-Chip data2.76□□□□□ -1.97not detected
VPS35YJL154C SED4P25365 1065 aa2.76□□□□□ -1.97
VPS35YJL154C TOM20P35180 183 aa2.76□□□□□ -1.97
VPS35YJL154C HSL7P38274 827 aa2.76□□□□□ -1.97
VPS35YJL154C ECL1P48235 211 aa2.76□□□□□ -1.97
VPS35YJL154C RXT3Q07458 294 aa2.76□□□□□ -1.97
VPS35YJL154C TPO1Q07824 586 aa2.76□□□□□ -1.97
VPS35YJL154C GIN4Q12263 1142 aa2.76□□□□□ -1.97
VPS35YJL154C RIB2Q12362 591 aaKnown RBP2.76□□□□□ -1.97
VPS35YJL154C YCL002CP25565 263 aa2.76□□□□□ -1.97
VPS35YJL154C MCD4P36051 919 aa2.76□□□□□ -1.97
VPS35YJL154C SPT20P50875 604 aa2.76□□□□□ -1.97
VPS35YJL154C MRPL22P53881 309 aa2.76□□□□□ -1.97
VPS35YJL154C THO2P53552 1597 aaKnown RBP2.75□□□□□ -1.97
VPS35YJL154C LAM1P38851 1228 aa2.75□□□□□ -1.97
VPS35YJL154C DUS1P53759 423 aaKnown RBP2.75□□□□□ -1.97
VPS35YJL154C HDA1P53973 706 aa2.75□□□□□ -1.97
VPS35YJL154C GPB1Q08886 897 aa2.75□□□□□ -1.97
VPS35YJL154C PCL2P25693 308 aa2.75□□□□□ -1.97
VPS35YJL154C NGG1P32494 702 aa2.75□□□□□ -1.97
VPS35YJL154C TDA3P38758 523 aa2.75□□□□□ -1.97
VPS35YJL154C PZF1P39933 429 aa2.75□□□□□ -1.97
VPS35YJL154C MTR3P48240 250 aaPredicted RBP2.75□□□□□ -1.97
VPS35YJL154C GCV2P49095 1034 aa2.75□□□□□ -1.97
VPS35YJL154C AIM14P53109 570 aa2.75□□□□□ -1.97
VPS35YJL154C PRP43P53131 767 aaKnown RBP2.75□□□□□ -1.97
VPS35YJL154C SSL1Q04673 461 aaPredicted RBP2.75□□□□□ -1.97
VPS35YJL154C RPN7Q06103 429 aaKnown RBP2.75□□□□□ -1.97
VPS35YJL154C YKR075CP36155 307 aa2.74□□□□□ -1.97
VPS35YJL154C GRX7P38068 203 aa2.74□□□□□ -1.97
VPS35YJL154C MET13P53128 600 aa2.74□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms