RNA–Protein interactions for RNA: YIR039C

YPS6, Transcript of Putative GPI-anchored aspartic protease, yeast

Gene YPS6, Length 1,614 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPS6	YIR039C	LRG1	P35688	1017 aa		4.01	□□□□□ -1.77
YPS6	YIR039C	NIT1	P40447	199 aa		4.01	□□□□□ -1.77
YPS6	YIR039C	YGR045C	P53229	120 aa		4.01	□□□□□ -1.77
YPS6	YIR039C	ELA1	P53861	379 aa	Predicted RBP	4.01	□□□□□ -1.77
YPS6	YIR039C	LAP2	Q10740	671 aa		4.01	□□□□□ -1.77
YPS6	YIR039C	MDM12	Q92328	271 aa		4.01	□□□□□ -1.77
YPS6	YIR039C	TOM70	P07213	617 aa	Known RBP	4	□□□□□ -1.77
YPS6	YIR039C	YCR015C	P25616	317 aa		4	□□□□□ -1.77
YPS6	YIR039C	PPH3	P32345	308 aa		4	□□□□□ -1.77
YPS6	YIR039C	YKL222C	P35995	705 aa		4	□□□□□ -1.77
YPS6	YIR039C	UBP6	P43593	499 aa	Known RBP	4	□□□□□ -1.77
YPS6	YIR039C	PTC5	Q12511	572 aa		4	□□□□□ -1.77
YPS6	YIR039C	MSD1	P15179	658 aa	Known RBP	3.99	□□□□□ -1.77
YPS6	YIR039C	YEF3	P16521	1044 aa	Known RBP	3.99	□□□□□ -1.77
YPS6	YIR039C	SWE1	P32944	819 aa		3.99	□□□□□ -1.77
YPS6	YIR039C	PET10	P36139	283 aa		3.99	□□□□□ -1.77
YPS6	YIR039C	GRX7	P38068	203 aa		3.99	□□□□□ -1.77
YPS6	YIR039C	POL12	P38121	705 aa	Predicted RBP	3.99	□□□□□ -1.77
YPS6	YIR039C	HSE1	P38753	452 aa		3.99	□□□□□ -1.77
YPS6	YIR039C	YAR028W	P39548	234 aa		3.99	□□□□□ -1.77
YPS6	YIR039C	SIT1	P39980	628 aa		3.99	□□□□□ -1.77
YPS6	YIR039C	HLJ1	P48353	224 aa		3.99	□□□□□ -1.77
YPS6	YIR039C	YGR237C	P50089	785 aa		3.99	□□□□□ -1.77
YPS6	YIR039C	TPO2	P53283	614 aa		3.99	□□□□□ -1.77
YPS6	YIR039C	FOL1	P53848	824 aa		3.99	□□□□□ -1.77
YPS6	YIR039C	YNL193W	P53870	558 aa		3.99	□□□□□ -1.77
YPS6	YIR039C	YDR306C	Q06640	478 aa		3.99	□□□□□ -1.77
YPS6	YIR039C	YLR001C	Q07895	862 aa		3.99	□□□□□ -1.77
YPS6	YIR039C	YML133C	Q03099	1374 aa		3.99	□□□□□ -1.77
YPS6	YIR039C	CFT1	Q06632	1357 aa	Known RBP	3.99	□□□□□ -1.77
YPS6	YIR039C	YLL067C	Q07888	1374 aa		3.99	□□□□□ -1.77
YPS6	YIR039C	YLL066C	Q99208	1374 aa		3.99	□□□□□ -1.77
YPS6	YIR039C	NNK1	P36003	928 aa		3.99	□□□□□ -1.77
YPS6	YIR039C	YBR284W	P38150	797 aa		3.99	□□□□□ -1.77
YPS6	YIR039C	PNT1	P38969	423 aa		3.99	□□□□□ -1.77
YPS6	YIR039C	VPS53	P47061	822 aa		3.99	□□□□□ -1.77
YPS6	YIR039C	PMT3	P47190	753 aa		3.99	□□□□□ -1.77
YPS6	YIR039C	ECL1	P48235	211 aa		3.99	□□□□□ -1.77
YPS6	YIR039C	SPP382	Q06411	708 aa	Predicted RBP	3.99	□□□□□ -1.77
YPS6	YIR039C	USO1	P25386	1790 aa		3.98	□□□□□ -1.77
YPS6	YIR039C	NUP145	P49687	1317 aa		3.98	□□□□□ -1.77
YPS6	YIR039C	NFS1	P25374	497 aa		3.98	□□□□□ -1.77
YPS6	YIR039C	AAR2	P32357	355 aa	Predicted RBP	3.98	□□□□□ -1.77
YPS6	YIR039C	DOM34	P33309	386 aa		3.98	□□□□□ -1.77
YPS6	YIR039C	MMM1	P41800	426 aa		3.98	□□□□□ -1.77
YPS6	YIR039C	SEC26	P41810	973 aa	Known RBP	3.98	□□□□□ -1.77
YPS6	YIR039C	PRP43	P53131	767 aa	Known RBP	3.98	□□□□□ -1.77
YPS6	YIR039C	YDL144C	Q07589	356 aa		3.98	□□□□□ -1.77
YPS6	YIR039C	YPL260W	Q08977	551 aa		3.98	□□□□□ -1.77
YPS6	YIR039C	TMA17	Q12513	150 aa		3.98	□□□□□ -1.77
YPS6	YIR039C	HAP1	P0CE41	1502 aa		3.98	□□□□□ -1.77
YPS6	YIR039C	RPS4A	P0CX35	261 aa	Known RBP	3.97	□□□□□ -1.77
YPS6	YIR039C	RPS4B	P0CX36	261 aa	Known RBP	3.97	□□□□□ -1.77
YPS6	YIR039C	YER152C	P10356	443 aa		3.97	□□□□□ -1.77
YPS6	YIR039C	RET1	P22276	1149 aa	Known RBP	3.97	□□□□□ -1.77
YPS6	YIR039C	GSY1	P23337	708 aa		3.97	□□□□□ -1.77
YPS6	YIR039C	DSS1	P39112	969 aa		3.97	□□□□□ -1.77
YPS6	YIR039C	GPG1	P53130	126 aa		3.97	□□□□□ -1.77
YPS6	YIR039C	PEX8	P53248	589 aa		3.97	□□□□□ -1.77
YPS6	YIR039C	BUL2	Q03758	920 aa	Known RBP	3.97	□□□□□ -1.77
YPS6	YIR039C	DUS3	Q06053	668 aa	Known RBP	3.97	□□□□□ -1.77
YPS6	YIR039C	THI73	Q07904	523 aa		3.97	□□□□□ -1.77
YPS6	YIR039C	YPR071W	Q12346	211 aa		3.97	□□□□□ -1.77
YPS6	YIR039C	DFG16	Q99234	619 aa		3.97	□□□□□ -1.77
YPS6	YIR039C	GCD1	P09032	578 aa	Predicted RBP	3.96	□□□□□ -1.78
YPS6	YIR039C	DBP2	P24783	546 aa	Known RBP	3.96	□□□□□ -1.78
YPS6	YIR039C	SEC6	P32844	805 aa		3.96	□□□□□ -1.78
YPS6	YIR039C	SMY2	P32909	740 aa	Known RBP	3.96	□□□□□ -1.78
YPS6	YIR039C	QNS1	P38795	714 aa	Known RBP	3.96	□□□□□ -1.78
YPS6	YIR039C	ALG2	P43636	503 aa		3.96	□□□□□ -1.78
YPS6	YIR039C	MPP10	P47083	593 aa	Known RBP	3.96	□□□□□ -1.78
YPS6	YIR039C	SUB1	P54000	292 aa	Known RBP	3.96	□□□□□ -1.78
YPS6	YIR039C	UME1	Q03010	460 aa		3.96	□□□□□ -1.78
YPS6	YIR039C	RSA3	Q05942	220 aa	Known RBP	3.96	□□□□□ -1.78
YPS6	YIR039C	NSI1	Q12457	570 aa		3.96	□□□□□ -1.78
YPS6	YIR039C	RVB2	Q12464	471 aa	Known RBP	3.96	□□□□□ -1.78
YPS6	YIR039C	LEU2	P04173	364 aa	Predicted RBP	3.95	□□□□□ -1.78
YPS6	YIR039C	RPL11A	P0C0W9	174 aa	Known RBP	3.95	□□□□□ -1.78
YPS6	YIR039C	RAD53	P22216	821 aa		3.95	□□□□□ -1.78
YPS6	YIR039C	VBA3	P25594	458 aa		3.95	□□□□□ -1.78
YPS6	YIR039C	CDC12	P32468	407 aa	Known RBP	3.95	□□□□□ -1.78
YPS6	YIR039C	AFR1	P33304	620 aa		3.95	□□□□□ -1.78
YPS6	YIR039C	WHI3	P34761	661 aa	Known RBP	3.95	□□□□□ -1.78
YPS6	YIR039C	PMC1	P38929	1173 aa	Predicted RBP	3.95	□□□□□ -1.78
YPS6	YIR039C	MGS1	P40151	587 aa		3.95	□□□□□ -1.78
YPS6	YIR039C	CIT3	P43635	486 aa		3.95	□□□□□ -1.78
YPS6	YIR039C	YJR120W	P47157	116 aa		3.95	□□□□□ -1.78
YPS6	YIR039C	RRP46	P53256	223 aa	Predicted RBP	3.95	□□□□□ -1.78
YPS6	YIR039C	SDA1	P53313	767 aa	Known RBP	3.95	□□□□□ -1.78
YPS6	YIR039C	PAP2	P53632	584 aa	Known RBP	3.95	□□□□□ -1.78
YPS6	YIR039C	HIM1	Q06674	414 aa		3.95	□□□□□ -1.78
YPS6	YIR039C	YOR059C	Q08448	450 aa	Known RBP	3.95	□□□□□ -1.78
YPS6	YIR039C	SPO21	Q12411	609 aa		3.95	□□□□□ -1.78
YPS6	YIR039C	RPL11B	Q3E757	174 aa	Predicted RBP	3.95	□□□□□ -1.78
YPS6	YIR039C	PSK1	P31374	1356 aa		3.95	□□□□□ -1.78
YPS6	YIR039C	GAS1	P22146	559 aa	Known RBP	3.95	□□□□□ -1.78
YPS6	YIR039C	KIP1	P28742	1111 aa		3.95	□□□□□ -1.78
YPS6	YIR039C	NMD3	P38861	518 aa	Known RBP	3.95	□□□□□ -1.78
YPS6	YIR039C	RTR1	P40084	226 aa	Predicted RBP	3.95	□□□□□ -1.78
YPS6	YIR039C	VPS27	P40343	622 aa	Known RBP	3.95	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms