RNA–Protein interactions for RNA: YIL017C

VID28, Transcript of GID Complex subunit, serves as adaptor for regulatory subunit Vid24p, yeast

Gene VID28, Length 2,766 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VID28	YIL017C	BMH1	P29311	267 aa	Known RBP	4.37	□□□□□ -1.71
VID28	YIL017C	SLA2	P33338	968 aa		4.37	□□□□□ -1.71
VID28	YIL017C	YEL1	P34225	687 aa		4.37	□□□□□ -1.71
VID28	YIL017C	SPP381	P38282	291 aa	Predicted RBP	4.37	□□□□□ -1.71
VID28	YIL017C	FCY21	P40039	528 aa		4.37	□□□□□ -1.71
VID28	YIL017C	INA22	P40576	216 aa		4.37	□□□□□ -1.71
VID28	YIL017C	ISM1	P48526	1002 aa		4.37	□□□□□ -1.71
VID28	YIL017C	YKE2	P52553	114 aa		4.37	□□□□□ -1.71
VID28	YIL017C	PPM1	Q04081	328 aa		4.37	□□□□□ -1.71
VID28	YIL017C	GTB1	Q04924	702 aa		4.37	□□□□□ -1.71
VID28	YIL017C	FMP42	Q04991	504 aa		4.37	□□□□□ -1.71
VID28	YIL017C	HTZ1	Q12692	134 aa	Known RBP	4.37	□□□□□ -1.71
VID28	YIL017C	FAS2	P19097	1887 aa	Known RBP	4.37	□□□□□ -1.71
VID28	YIL017C	URA4	P20051	364 aa		4.36	□□□□□ -1.71
VID28	YIL017C	MSM1	P22438	575 aa		4.36	□□□□□ -1.71
VID28	YIL017C	RAD57	P25301	460 aa		4.36	□□□□□ -1.71
VID28	YIL017C	ASF1	P32447	279 aa		4.36	□□□□□ -1.71
VID28	YIL017C	FBP26	P32604	452 aa		4.36	□□□□□ -1.71
VID28	YIL017C	RCN1	P36054	211 aa		4.36	□□□□□ -1.71
VID28	YIL017C	FZO1	P38297	855 aa		4.36	□□□□□ -1.71
VID28	YIL017C	IPL1	P38991	367 aa		4.36	□□□□□ -1.71
VID28	YIL017C	SHQ1	P40486	507 aa	Predicted RBP	4.36	□□□□□ -1.71
VID28	YIL017C	SDS3	P40505	327 aa		4.36	□□□□□ -1.71
VID28	YIL017C	EMP47	P43555	445 aa		4.36	□□□□□ -1.71
VID28	YIL017C	YGL176C	P46945	554 aa		4.36	□□□□□ -1.71
VID28	YIL017C	MLC1	P53141	149 aa		4.36	□□□□□ -1.71
VID28	YIL017C	ERP6	P53198	216 aa		4.36	□□□□□ -1.71
VID28	YIL017C	TUB4	P53378	473 aa		4.36	□□□□□ -1.71
VID28	YIL017C	BNI4	P53858	892 aa		4.36	□□□□□ -1.71
VID28	YIL017C	RPL22B	P56628	122 aa	Known RBP	4.36	□□□□□ -1.71
VID28	YIL017C	BUG1	Q12191	341 aa		4.36	□□□□□ -1.71
VID28	YIL017C	STF2	P16965	84 aa		4.36	□□□□□ -1.71
VID28	YIL017C	VAN1	P23642	535 aa		4.36	□□□□□ -1.71
VID28	YIL017C	RPC19	P28000	142 aa	Known RBP	4.36	□□□□□ -1.71
VID28	YIL017C	KIP1	P28742	1111 aa		4.36	□□□□□ -1.71
VID28	YIL017C	KIP2	P28743	706 aa		4.36	□□□□□ -1.71
VID28	YIL017C	RAD24	P32641	659 aa		4.36	□□□□□ -1.71
VID28	YIL017C	STE13	P33894	931 aa		4.36	□□□□□ -1.71
VID28	YIL017C	UTP11	P34247	250 aa	Predicted RBP	4.36	□□□□□ -1.71
VID28	YIL017C	OAF3	P36023	863 aa		4.36	□□□□□ -1.71
VID28	YIL017C	UBP12	P39538	1254 aa		4.36	□□□□□ -1.71
VID28	YIL017C	MET18	P40469	1032 aa		4.36	□□□□□ -1.71
VID28	YIL017C	TDA10	P42938	290 aa		4.36	□□□□□ -1.71
VID28	YIL017C	BIR1	P47134	954 aa		4.36	□□□□□ -1.71
VID28	YIL017C	RPA14	P50106	137 aa		4.36	□□□□□ -1.71
VID28	YIL017C	SYH1	Q02875	849 aa	Known RBP	4.36	□□□□□ -1.71
VID28	YIL017C	DML1	Q03652	475 aa		4.36	□□□□□ -1.71
VID28	YIL017C	UTP5	Q04177	643 aa	Known RBP	4.36	□□□□□ -1.71
VID28	YIL017C	HFD1	Q04458	532 aa		4.36	□□□□□ -1.71
VID28	YIL017C	YDR341C	Q05506	607 aa	Known RBP	4.36	□□□□□ -1.71
VID28	YIL017C	FRA1	Q07825	749 aa		4.36	□□□□□ -1.71
VID28	YIL017C	YOL057W	Q08225	711 aa		4.36	□□□□□ -1.71
VID28	YIL017C	DAS2	Q12084	232 aa		4.36	□□□□□ -1.71
VID28	YIL017C	SPO21	Q12411	609 aa		4.36	□□□□□ -1.71
VID28	YIL017C	YDL206W	Q12424	762 aa		4.36	□□□□□ -1.71
VID28	YIL017C	SSK22	P25390	1331 aa	Predicted RBP	4.36	□□□□□ -1.71
VID28	YIL017C	HMG1	P12683	1054 aa		4.36	□□□□□ -1.71
VID28	YIL017C	NMT1	P14743	455 aa		4.36	□□□□□ -1.71
VID28	YIL017C	RAM1	P22007	431 aa		4.36	□□□□□ -1.71
VID28	YIL017C	MVD1	P32377	396 aa	Known RBP	4.36	□□□□□ -1.71
VID28	YIL017C	RTS1	P38903	757 aa		4.36	□□□□□ -1.71
VID28	YIL017C	NOC2	P39744	710 aa	Known RBP	4.36	□□□□□ -1.71
VID28	YIL017C	SGM1	P47166	707 aa		4.36	□□□□□ -1.71
VID28	YIL017C	PKH1	Q03407	766 aa		4.36	□□□□□ -1.71
VID28	YIL017C	HCR1	Q05775	265 aa	Known RBP	4.36	□□□□□ -1.71
VID28	YIL017C	TDA5	Q06417	326 aa	Known RBP	4.36	□□□□□ -1.71
VID28	YIL017C	OSW1	Q08692	278 aa		4.36	□□□□□ -1.71
VID28	YIL017C	RSA1	Q08932	381 aa		4.36	□□□□□ -1.71
VID28	YIL017C	BRR1	Q99177	341 aa	Predicted RBP	4.36	□□□□□ -1.71
VID28	YIL017C	PET494	P07390	489 aa	Predicted RBP	4.35	□□□□□ -1.71
VID28	YIL017C	SMY1	P32364	656 aa	Known RBP	4.35	□□□□□ -1.71
VID28	YIL017C	NUP120	P35729	1037 aa		4.35	□□□□□ -1.71
VID28	YIL017C	SET3	P36124	751 aa		4.35	□□□□□ -1.71
VID28	YIL017C	YRO2	P38079	344 aa		4.35	□□□□□ -1.71
VID28	YIL017C	CTM1	P38818	585 aa		4.35	□□□□□ -1.71
VID28	YIL017C	ERP5	P38819	212 aa		4.35	□□□□□ -1.71
VID28	YIL017C	PEX18	P38855	283 aa		4.35	□□□□□ -1.71
VID28	YIL017C	MRPS35	P53292	345 aa		4.35	□□□□□ -1.71
VID28	YIL017C	YNL144C	P53907	740 aa		4.35	□□□□□ -1.71
VID28	YIL017C	EEB1	Q02891	456 aa		4.35	□□□□□ -1.71
VID28	YIL017C	GIR2	Q03768	265 aa	Predicted RBP	4.35	□□□□□ -1.71
VID28	YIL017C	PLP1	Q04004	230 aa		4.35	□□□□□ -1.71
VID28	YIL017C	YDR344C	Q05510	147 aa		4.35	□□□□□ -1.71
VID28	YIL017C	FUS2	Q05670	677 aa		4.35	□□□□□ -1.71
VID28	YIL017C	UTP4	Q06679	776 aa	Known RBP	4.35	□□□□□ -1.71
VID28	YIL017C	YDL114W	Q07530	308 aa		4.35	□□□□□ -1.71
VID28	YIL017C	MCM4	P30665	933 aa	Known RBP	4.35	□□□□□ -1.71
VID28	YIL017C	NAM7	P30771	971 aa	Known RBP	4.35	□□□□□ -1.71
VID28	YIL017C	ATO2	P32907	282 aa		4.35	□□□□□ -1.71
VID28	YIL017C	IFA38	P38286	347 aa		4.35	□□□□□ -1.71
VID28	YIL017C	YHL012W	P38709	493 aa		4.35	□□□□□ -1.71
VID28	YIL017C	JEM1	P40358	645 aa		4.35	□□□□□ -1.71
VID28	YIL017C	KTR7	P40504	517 aa		4.35	□□□□□ -1.71
VID28	YIL017C	FIG4	P42837	879 aa		4.35	□□□□□ -1.71
VID28	YIL017C	RSM28	Q03430	361 aa		4.35	□□□□□ -1.71
VID28	YIL017C	USA1	Q03714	838 aa		4.35	□□□□□ -1.71
VID28	YIL017C	PIG1	Q06216	648 aa		4.35	□□□□□ -1.71
VID28	YIL017C	YPR172W	Q06608	200 aa		4.35	□□□□□ -1.71
VID28	YIL017C	ATP16	Q12165	160 aa		4.35	□□□□□ -1.71
VID28	YIL017C	YBL113C	Q7M4S9	792 aa		4.35	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms