RNA–Protein interactions for RNA: YGR112W

SHY1, Transcript of Mitochondrial inner membrane protein required for complex IV assembly, yeast

Gene SHY1, Length 1,170 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHY1	YGR112W	HUL5	P53119	910 aa		10.15	□□□□□ -0.78
SHY1	YGR112W	PEX29	Q03370	554 aa		10.15	□□□□□ -0.78
SHY1	YGR112W	RAD1	P06777	1100 aa		10.14	□□□□□ -0.79
SHY1	YGR112W	YDJ1	P25491	409 aa	Known RBP	10.14	□□□□□ -0.79
SHY1	YGR112W	RGD1	P38339	666 aa		10.14	□□□□□ -0.79
SHY1	YGR112W	SYH1	Q02875	849 aa	Known RBP	10.14	□□□□□ -0.79
SHY1	YGR112W	YML082W	Q04533	649 aa	Known RBP	10.14	□□□□□ -0.79
SHY1	YGR112W	ECI1	Q05871	280 aa		10.14	□□□□□ -0.79
SHY1	YGR112W	SFH1	Q06168	426 aa		10.14	□□□□□ -0.79
SHY1	YGR112W	OMS1	Q06668	471 aa		10.14	□□□□□ -0.79
SHY1	YGR112W	ISA1	Q07821	250 aa	Predicted RBP	10.14	□□□□□ -0.79
SHY1	YGR112W	NCR1	Q12200	1170 aa		10.14	□□□□□ -0.79
SHY1	YGR112W	ZRT2	Q12436	422 aa		10.14	□□□□□ -0.79
SHY1	YGR112W	CDC48	P25694	835 aa	Known RBP	10.13	□□□□□ -0.79
SHY1	YGR112W	DEP1	P31385	405 aa		10.13	□□□□□ -0.79
SHY1	YGR112W	UTR4	P32626	227 aa		10.13	□□□□□ -0.79
SHY1	YGR112W	RAD54	P32863	898 aa		10.13	□□□□□ -0.79
SHY1	YGR112W	ATG19	P35193	415 aa		10.13	□□□□□ -0.79
SHY1	YGR112W	YKL050C	P35736	922 aa		10.13	□□□□□ -0.79
SHY1	YGR112W	LAS1	P36146	502 aa	Predicted RBP	10.13	□□□□□ -0.79
SHY1	YGR112W	TAM41	P53230	385 aa		10.13	□□□□□ -0.79
SHY1	YGR112W	SVF1	Q05515	481 aa		10.13	□□□□□ -0.79
SHY1	YGR112W	DON1	Q05610	365 aa		10.13	□□□□□ -0.79
SHY1	YGR112W	APL5	Q08951	932 aa	Known RBP	10.13	□□□□□ -0.79
SHY1	YGR112W	RUD3	Q12234	484 aa	Known RBP	10.13	□□□□□ -0.79
SHY1	YGR112W	NAM7	P30771	971 aa	Known RBP	10.12	□□□□□ -0.79
SHY1	YGR112W	BLI1	P35727	113 aa		10.12	□□□□□ -0.79
SHY1	YGR112W	TRZ1	P36159	838 aa	Predicted RBP	10.12	□□□□□ -0.79
SHY1	YGR112W	OLA1	P38219	394 aa	Known RBP	10.12	□□□□□ -0.79
SHY1	YGR112W	RCK2	P38623	610 aa		10.12	□□□□□ -0.79
SHY1	YGR112W	RPC17	P47076	161 aa		10.12	□□□□□ -0.79
SHY1	YGR112W	JJJ1	P53863	590 aa		10.12	□□□□□ -0.79
SHY1	YGR112W	YMR018W	Q04364	514 aa		10.12	□□□□□ -0.79
SHY1	YGR112W	SLX4	Q12098	748 aa		10.12	□□□□□ -0.79
SHY1	YGR112W	YDL206W	Q12424	762 aa		10.12	□□□□□ -0.79
SHY1	YGR112W	KIP1	P28742	1111 aa		10.11	□□□□□ -0.79
SHY1	YGR112W	MUD1	P32605	298 aa	Known RBP	10.11	□□□□□ -0.79
SHY1	YGR112W	YKR018C	P36114	725 aa		10.11	□□□□□ -0.79
SHY1	YGR112W	BCH2	P36122	765 aa		10.11	□□□□□ -0.79
SHY1	YGR112W	EXO5	P38289	585 aa		10.11	□□□□□ -0.79
SHY1	YGR112W	VAB2	P40003	282 aa		10.11	□□□□□ -0.79
SHY1	YGR112W	ENV11	P53246	860 aa		10.11	□□□□□ -0.79
SHY1	YGR112W	RNT1	Q02555	471 aa		10.11	□□□□□ -0.79
SHY1	YGR112W	NOC3	Q07896	663 aa	Predicted RBP	10.11	□□□□□ -0.79
SHY1	YGR112W	SNF1	P06782	633 aa	Known RBP	10.1	□□□□□ -0.79
SHY1	YGR112W	SPT2	P06843	333 aa	Predicted RBP	10.1	□□□□□ -0.79
SHY1	YGR112W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	10.1	□□□□□ -0.79	not detected
SHY1	YGR112W	COT1	P32798	439 aa		10.1	□□□□□ -0.79
SHY1	YGR112W	VPS35	P34110	944 aa		10.1	□□□□□ -0.79
SHY1	YGR112W	SPP381	P38282	291 aa	Predicted RBP	10.1	□□□□□ -0.79
SHY1	YGR112W	GDT1	P38301	280 aa	Predicted RBP	10.1	□□□□□ -0.79
SHY1	YGR112W	AVT1	P47082	602 aa		10.1	□□□□□ -0.79
SHY1	YGR112W	UBP15	P50101	1230 aa		10.1	□□□□□ -0.79
SHY1	YGR112W	YGL140C	P53120	1219 aa		10.1	□□□□□ -0.79
SHY1	YGR112W	STE23	Q06010	1027 aa		10.1	□□□□□ -0.79
SHY1	YGR112W	YOR223W	Q12015	292 aa		10.1	□□□□□ -0.79
SHY1	YGR112W	SPO21	Q12411	609 aa		10.1	□□□□□ -0.79
SHY1	YGR112W	VMA2	P16140	517 aa	Known RBP	10.09	□□□□□ -0.79
SHY1	YGR112W	CDC11	P32458	415 aa		10.09	□□□□□ -0.79
SHY1	YGR112W	REG2	P38232	338 aa		10.09	□□□□□ -0.79
SHY1	YGR112W	PNT1	P38969	423 aa		10.09	□□□□□ -0.79
SHY1	YGR112W	PEA2	P40091	420 aa		10.09	□□□□□ -0.79
SHY1	YGR112W	PSY2	P40164	858 aa		10.09	□□□□□ -0.79
SHY1	YGR112W	VPS53	P47061	822 aa		10.09	□□□□□ -0.79
SHY1	YGR112W	YJR079W	P47126	109 aa		10.09	□□□□□ -0.79
SHY1	YGR112W	VPS70	P47161	811 aa		10.09	□□□□□ -0.79
SHY1	YGR112W	ROD1	Q02805	837 aa		10.09	□□□□□ -0.79
SHY1	YGR112W	EEB1	Q02891	456 aa		10.09	□□□□□ -0.79
SHY1	YGR112W	SMC5	Q08204	1093 aa		10.09	□□□□□ -0.79
SHY1	YGR112W	CDC53	Q12018	815 aa	Known RBP	10.09	□□□□□ -0.79
SHY1	YGR112W	RIO1	Q12196	484 aa	Known RBP	10.09	□□□□□ -0.79
SHY1	YGR112W	ERP3	Q12403	225 aa		10.09	□□□□□ -0.79
SHY1	YGR112W	YLR462W	O13556	202 aa		10.08	□□□□□ -0.8
SHY1	YGR112W	CDC33	P07260	213 aa	Known RBP	10.08	□□□□□ -0.8
SHY1	YGR112W	TKL1	P23254	680 aa	Known RBP	10.08	□□□□□ -0.8
SHY1	YGR112W	CLB1	P24868	471 aa		10.08	□□□□□ -0.8
SHY1	YGR112W	SEC21	P32074	935 aa	Known RBP	10.08	□□□□□ -0.8
SHY1	YGR112W	UBC6	P33296	250 aa	Predicted RBP	10.08	□□□□□ -0.8
SHY1	YGR112W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	10.08	□□□□□ -0.8	not detected
SHY1	YGR112W	TVP38	P36164	337 aa		10.08	□□□□□ -0.8
SHY1	YGR112W	YHL049C	P38722	271 aa		10.08	□□□□□ -0.8
SHY1	YGR112W	YEL075C	P39972	122 aa		10.08	□□□□□ -0.8
SHY1	YGR112W	HMF1	P40037	129 aa	Known RBP	10.08	□□□□□ -0.8
SHY1	YGR112W	LCP5	P40079	357 aa	Predicted RBP	10.08	□□□□□ -0.8
SHY1	YGR112W	YER189W	P40104	122 aa		10.08	□□□□□ -0.8
SHY1	YGR112W	YNL320W	P42840	284 aa		10.08	□□□□□ -0.8
SHY1	YGR112W	YFL064C	P43540	174 aa		10.08	□□□□□ -0.8
SHY1	YGR112W	BRO1	P48582	844 aa		10.08	□□□□□ -0.8
SHY1	YGR112W	CWC15	Q03772	175 aa	Known RBP	10.08	□□□□□ -0.8
SHY1	YGR112W	DUS4	Q06063	367 aa		10.08	□□□□□ -0.8
SHY1	YGR112W	AIM41	Q12032	185 aa		10.08	□□□□□ -0.8
SHY1	YGR112W	YBL111C	Q3E7Y5	667 aa		10.08	□□□□□ -0.8
SHY1	YGR112W	DED1	P06634	604 aa	Known RBP	10.07	□□□□□ -0.8
SHY1	YGR112W	SLD2	P34252	453 aa		10.07	□□□□□ -0.8
SHY1	YGR112W	RRT2	P38332	387 aa		10.07	□□□□□ -0.8
SHY1	YGR112W	HIS2	P38635	335 aa		10.07	□□□□□ -0.8
SHY1	YGR112W	KAP123	P40069	1113 aa	Known RBP	10.07	□□□□□ -0.8
SHY1	YGR112W	CLA4	P48562	842 aa		10.07	□□□□□ -0.8
SHY1	YGR112W	RTT102	P53330	157 aa		10.07	□□□□□ -0.8
SHY1	YGR112W	VMA1	P17255	1071 aa	Known RBP	10.06	□□□□□ -0.8

Retrieved 100 of 5,963 RNA–protein pairs in 11 ms