RNA–Protein interactions for RNA: YGR009C

SEC9, Transcript of t-SNARE protein required for secretory vesicle-plasma membrane fusion, yeastyeast

Gene SEC9, Length 1,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC9YGR009C DHR2P36009 735 aaPredicted RBP5.17□□□□□ -1.58
SEC9YGR009C UBP11P36026 717 aa5.17□□□□□ -1.58
SEC9YGR009C RDH54P38086 958 aa5.17□□□□□ -1.58
SEC9YGR009C SMF2P38778 549 aa5.17□□□□□ -1.58
SEC9YGR009C RTC3P38804 111 aaPredicted RBP5.17□□□□□ -1.58
SEC9YGR009C MBP1P39678 833 aa5.17□□□□□ -1.58
SEC9YGR009C VNX1P42839 908 aa5.17□□□□□ -1.58
SEC9YGR009C CCT8P47079 568 aaKnown RBP5.17□□□□□ -1.58
SEC9YGR009C SSN8P47821 323 aa5.17□□□□□ -1.58
SEC9YGR009C TOM22P49334 152 aa5.17□□□□□ -1.58
SEC9YGR009C GSF2Q04697 403 aaKnown RBP5.17□□□□□ -1.58
SEC9YGR009C DIB1Q06819 143 aaPredicted RBP5.17□□□□□ -1.58
SEC9YGR009C PUF3Q07807 879 aaKnown RBP RIP-Chip data5.17□□□□□ -1.58not detected
SEC9YGR009C RRP6Q12149 733 aaKnown RBP5.17□□□□□ -1.58
SEC9YGR009C DSF1P0CX08 502 aa5.16□□□□□ -1.58
SEC9YGR009C YNR073CP0CX09 502 aa5.16□□□□□ -1.58
SEC9YGR009C ENA1P13587 1091 aa5.16□□□□□ -1.58
SEC9YGR009C MAK11P20484 414 aaKnown RBP5.16□□□□□ -1.58
SEC9YGR009C DBP1P24784 617 aaKnown RBP5.16□□□□□ -1.58
SEC9YGR009C SPS22P25380 463 aa5.16□□□□□ -1.58
SEC9YGR009C RPC53P25441 422 aa5.16□□□□□ -1.58
SEC9YGR009C DMC1P25453 334 aa5.16□□□□□ -1.58
SEC9YGR009C MSH1P25846 959 aa5.16□□□□□ -1.58
SEC9YGR009C YJU2P28320 278 aaPredicted RBP5.16□□□□□ -1.58
SEC9YGR009C MEI4P29467 408 aa5.16□□□□□ -1.58
SEC9YGR009C MEI5P32489 222 aa5.16□□□□□ -1.58
SEC9YGR009C ORC2P32833 620 aa5.16□□□□□ -1.58
SEC9YGR009C SSO1P32867 290 aa5.16□□□□□ -1.58
SEC9YGR009C CSE1P33307 960 aa5.16□□□□□ -1.58
SEC9YGR009C STE13P33894 931 aa5.16□□□□□ -1.58
SEC9YGR009C YIL161WP40449 235 aaKnown RBP5.16□□□□□ -1.58
SEC9YGR009C LSG1P53145 640 aaKnown RBP5.16□□□□□ -1.58
SEC9YGR009C MPS2P53159 387 aa5.16□□□□□ -1.58
SEC9YGR009C IPI3P53877 555 aa5.16□□□□□ -1.58
SEC9YGR009C ENA2Q01896 1091 aa5.16□□□□□ -1.58
SEC9YGR009C MET14Q02196 202 aa5.16□□□□□ -1.58
SEC9YGR009C VPS60Q03390 229 aa5.16□□□□□ -1.58
SEC9YGR009C OPY2Q06810 360 aa5.16□□□□□ -1.58
SEC9YGR009C YDL124WQ07551 312 aaKnown RBP5.16□□□□□ -1.58
SEC9YGR009C ABP140Q08641 628 aaKnown RBP5.16□□□□□ -1.58
SEC9YGR009C TRM8Q12009 286 aa5.16□□□□□ -1.58
SEC9YGR009C ENA5Q12691 1091 aa5.16□□□□□ -1.58
SEC9YGR009C CDC16P09798 840 aa5.16□□□□□ -1.58
SEC9YGR009C THI4P32318 326 aa5.16□□□□□ -1.58
SEC9YGR009C SSE1P32589 693 aaKnown RBP5.16□□□□□ -1.58
SEC9YGR009C MGM101P32787 269 aaKnown RBP5.16□□□□□ -1.58
SEC9YGR009C PET112P33893 541 aa5.16□□□□□ -1.58
SEC9YGR009C VPS51P36116 164 aa5.16□□□□□ -1.58
SEC9YGR009C ALG3P38179 458 aa5.16□□□□□ -1.58
SEC9YGR009C ALG14P38242 237 aa5.16□□□□□ -1.58
SEC9YGR009C NOP16P40007 231 aaKnown RBP5.16□□□□□ -1.58
SEC9YGR009C SBE2P42223 864 aaKnown RBP5.16□□□□□ -1.58
SEC9YGR009C CCT7P42943 550 aaKnown RBP5.16□□□□□ -1.58
SEC9YGR009C CIT3P43635 486 aa5.16□□□□□ -1.58
SEC9YGR009C STU2P46675 888 aa5.16□□□□□ -1.58
SEC9YGR009C URB2P47108 1174 aa5.16□□□□□ -1.58
SEC9YGR009C YNL034WP53963 612 aa5.16□□□□□ -1.58
SEC9YGR009C YNL018CP53976 612 aa5.16□□□□□ -1.58
SEC9YGR009C GCR2Q01722 534 aa5.16□□□□□ -1.58
SEC9YGR009C FMP30Q02883 468 aa5.16□□□□□ -1.58
SEC9YGR009C PKH3Q03306 898 aaPredicted RBP5.16□□□□□ -1.58
SEC9YGR009C LCD1Q04377 747 aa5.16□□□□□ -1.58
SEC9YGR009C DPB4Q04603 196 aaKnown RBP5.16□□□□□ -1.58
SEC9YGR009C SPC2Q04969 178 aa5.16□□□□□ -1.58
SEC9YGR009C SSC1P0CS90 654 aaKnown RBP5.15□□□□□ -1.58
SEC9YGR009C MRP7P12687 371 aa5.15□□□□□ -1.58
SEC9YGR009C HMX1P32339 317 aa5.15□□□□□ -1.58
SEC9YGR009C TGL4P36165 910 aa5.15□□□□□ -1.58
SEC9YGR009C ATP3P38077 311 aaKnown RBP5.15□□□□□ -1.58
SEC9YGR009C PAN5P38787 379 aa5.15□□□□□ -1.58
SEC9YGR009C GEM1P39722 662 aa5.15□□□□□ -1.58
SEC9YGR009C ZRG8P40021 1076 aa5.15□□□□□ -1.58
SEC9YGR009C YFR006WP43590 535 aa5.15□□□□□ -1.58
SEC9YGR009C ABM1P47146 123 aa5.15□□□□□ -1.58
SEC9YGR009C YGR237CP50089 785 aa5.15□□□□□ -1.58
SEC9YGR009C MLC1P53141 149 aa5.15□□□□□ -1.58
SEC9YGR009C EIS1Q05050 843 aaKnown RBP5.15□□□□□ -1.58
SEC9YGR009C YLR287CQ05881 355 aa5.15□□□□□ -1.58
SEC9YGR009C TYW1Q08960 810 aaKnown RBP5.15□□□□□ -1.58
SEC9YGR009C ACF2Q12168 779 aa5.15□□□□□ -1.58
SEC9YGR009C WSC3Q12215 556 aa5.15□□□□□ -1.58
SEC9YGR009C SRN2Q99176 213 aa5.15□□□□□ -1.58
SEC9YGR009C FUR4P05316 633 aaKnown RBP5.15□□□□□ -1.59
SEC9YGR009C MIS1P09440 975 aaKnown RBP5.15□□□□□ -1.59
SEC9YGR009C FUR1P18562 216 aaKnown RBP5.15□□□□□ -1.59
SEC9YGR009C GRX1P25373 110 aaKnown RBP5.15□□□□□ -1.59
SEC9YGR009C RDS1P25611 832 aa5.15□□□□□ -1.59
SEC9YGR009C DBF20P32328 564 aa5.15□□□□□ -1.59
SEC9YGR009C MET4P32389 672 aa5.15□□□□□ -1.59
SEC9YGR009C VPS35P34110 944 aa5.15□□□□□ -1.59
SEC9YGR009C PXL1P36166 706 aa5.15□□□□□ -1.59
SEC9YGR009C GRS1P38088 690 aaKnown RBP5.15□□□□□ -1.59
SEC9YGR009C POP7P38291 140 aa5.15□□□□□ -1.59
SEC9YGR009C RIO2P40160 425 aaKnown RBP5.15□□□□□ -1.59
SEC9YGR009C AGE2P40529 298 aa5.15□□□□□ -1.59
SEC9YGR009C MDV1P47025 714 aa5.15□□□□□ -1.59
SEC9YGR009C VMA10P48836 114 aaKnown RBP5.15□□□□□ -1.59
SEC9YGR009C SPP1Q03012 353 aa5.15□□□□□ -1.59
SEC9YGR009C TAF8Q03750 510 aa5.15□□□□□ -1.59
SEC9YGR009C YDR131CQ03899 556 aa5.15□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms